Array 1 1163020-1167912 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012952.1 Acinetobacter baumannii strain D36 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1163020 30 96.7 31 ............................C. TTAAAATAATTTTCCCCCACTAAGATACTAC 1163081 30 93.3 30 ............................AA ACATCTTTATTGAAGCTCTTGCTGTATCTG 1163141 30 96.7 30 ............................A. TATACCTAGCATCCCCTTTGAGTTCTTCTG 1163201 30 96.7 30 .............................G ATTTAAAAGGAGCCAGCCATGAGTGAGTTT 1163261 30 93.3 30 ............................AG AGGGGGTACGCAGATTGTGCGTACCCTTTT 1163321 30 93.3 30 ............................CC ATTGCAAAGCCATTGCATCTGCAATGCCTT 1163381 30 100.0 30 .............................. AAAGTTAAGTCCATTTTGTTCAGTAACAAT 1163441 30 93.3 30 ............................AA GAACCTGTATTTGATCCTGATACGCCATTG 1163501 30 93.3 30 ............................GA CACACAACCCAAAAGATTGGCACGTTCAAG 1163561 30 100.0 30 .............................. TCATCAGTAGCAGAGTTAGACCCTTCAATC 1163621 30 100.0 30 .............................. GCCGCGTGGGTAATGAACTGCTTTTTGTAC 1163681 30 100.0 30 .............................. GAAGATGAGCTAACAAATCAACGCCAACTT 1163741 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 1163801 30 93.3 30 ............................GG TTATTGATCCAGCCATAAAAGAATTGCTCT 1163861 30 93.3 30 ............................GC ATAAAAGTACAAACTAGGGTCAATGATGTA 1163921 30 93.3 30 ............................AA AGGATTCTTGCTCAAACGCCGAGGTTATAA 1163981 30 93.3 30 ............................AA TTGCTGTGACCGAGCCAAAGCGGAAATAAA 1164041 30 96.7 30 .............................G CTTAACTGTTCTGTCACTCAATTGGCAGAA 1164101 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 1164161 30 96.7 30 ............................G. TATGAAGTTGACGGTCTTGTCTCGCCTGAA 1164221 30 96.7 30 ............................A. CTGGTAACCGTTTCGGTGATACCACTTGGA 1164281 30 96.7 30 .............................G AGAAGCCGAAAGCAACACGAGCACATTGAA 1164341 30 93.3 30 ............................CA AAAGTATTGCCGCAATGCCTTCTCAAATAC 1164401 30 100.0 30 .............................. AAGTGCATCGATCGCATCCGCACCGCTAAT 1164461 30 93.3 30 ............................AA GAATAAACGCATTTTAGATGGTATTGAAGG 1164521 30 90.0 30 ......A.....................AA TGCGCCTCAGCTATCACAAAAGTCGAGCAA 1164581 30 93.3 30 ............................GC AAGGCGACTGCAAAAAATACTTCTGGACTA 1164641 30 93.3 30 ............................AC AAATTGATTATACATTAGCCAAATTGTAAA 1164701 30 93.3 30 ............................AG AAGAAATGCAAGGCCGCAATCTGTCATTCA 1164761 30 100.0 30 .............................. TTGAAAGGTAAAGAGCCTAAAAATCTTACA 1164821 30 96.7 30 ............................A. GGATTAAAGACTGCTGAAACAAGAGCAGCT 1164881 30 96.7 30 ............................A. GAGTGAGTTTAAAGAGTTCAAAGTTGGTGA 1164941 30 93.3 30 ............................AA GAATTGTCTGCTGAAGACATTGAAGGAATT 1165001 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 1165061 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 1165121 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 1165181 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 1165241 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 1165301 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 1165361 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 1165421 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 1165481 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 1165541 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 1165601 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 1165661 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 1165721 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 1165781 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 1165841 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 1165901 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 1165961 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 1166021 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 1166081 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 1166141 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 1166201 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 1166261 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 1166321 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 1166381 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 1166441 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 1166501 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 1166561 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 1166621 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 1166681 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 1166741 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 1166801 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 1166861 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 1166921 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 1166981 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 1167041 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 1167102 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 1167162 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 1167222 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 1167282 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 1167342 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 1167402 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 1167462 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 1167523 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 1167583 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 1167643 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 1167703 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 1167763 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 1167823 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 1167883 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 82 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //