Array 1 12526-17354 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCWF01000019.1 Poseidonibacter antarcticus strain SM1702 1131d_scaffold19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12526 28 100.0 32 ............................ TCATAAAAATCTTTAACCGCATCTTTAATATC 12586 28 100.0 32 ............................ ATCAGGGGCAGCAGTTGCAAAGTTTGGCTTAG 12646 28 100.0 32 ............................ TATTATTGTTATGGGTGTTTCGAAATCGTTTT 12706 28 100.0 32 ............................ GAATGTTGCGATATTTGCAACTATTCCAATAG 12766 28 100.0 32 ............................ TATTACAAAATCAATAGACAAATCAATTGTTA 12826 28 100.0 32 ............................ TTTTGATAGTTCTATCTTATAAGCCATTTTAA 12886 28 100.0 32 ............................ TAATGGAATGTTGATACAATGGGGCGAGTTCA 12946 28 100.0 32 ............................ TTTCTTAAATTTTTTTATTTATTTATTAATTA 13006 28 100.0 32 ............................ AATAATAGTGATCCACTTTAAATGCTTCAATA 13066 28 100.0 32 ............................ AACAGATGAACAACTGTTAAGTTTTGGACTAA 13126 28 100.0 32 ............................ TTTATATGTTTATAGAAAAGTTAGATATTATT 13186 28 100.0 32 ............................ ATTATTAAAACCAAAAGAGAAAAAAGAAGTTA 13246 28 100.0 32 ............................ TTGCTGGATTAACAAGGGGGTCTAAGTGGTTA 13306 28 100.0 32 ............................ AATATTTACCTTTATTCTTTTTAGATTCTCTT 13366 28 100.0 32 ............................ ATCTAAAATAGAAGCTCTTTTCTCCTGTACTA 13426 28 100.0 32 ............................ TCACGAACATCAATTACATTTTATTGATAATA 13486 28 100.0 32 ............................ AATTAAGCACGTTCTTAATATCTGCATCTATT 13546 28 100.0 32 ............................ ATTAGCAATAATTAATCCGTGTTTTGCACTCA 13606 28 100.0 32 ............................ AACCTAAAAAAGGAACTTTAGAAAGTAAAGGC 13666 28 100.0 32 ............................ TTCACATAAGGCACTATATACAGTAGCAACTC 13726 28 100.0 32 ............................ TGATACAAATTATCAATATTCAAAGAACTAGA 13786 28 100.0 32 ............................ CAAGCAATGTACTAGATAGTTTAGGAATTAAT 13846 28 100.0 32 ............................ AAATGAACATTTCATACTTATCTGTTTTTTTA 13906 28 100.0 32 ............................ ACTTGGTAAAAACTTTTGTTCTATTCGCTTTA 13966 28 100.0 32 ............................ AATATGCCCGACCTGAGTCATTTTCTTGATAT 14026 28 100.0 32 ............................ ATTACTTAGAATCGTGTTTGAATTATCCGCTA 14086 28 100.0 32 ............................ AACTTTCTCTTCTTCATCACCTTTTGCAATTT 14146 28 100.0 32 ............................ CTTACAGTCGATAATCTAAGCACTATTAGACT 14206 28 100.0 32 ............................ TCTTGAAAAAGATTGGTTTTATCTTACAGATA 14266 28 100.0 32 ............................ AAGAGCATTCAGAGCAGAAAAATTATCATAAA 14326 28 100.0 32 ............................ TTACATAAAATTTATTATTTGTCTTTCTAATT 14386 28 100.0 32 ............................ TAAATTACCAGCTTTAACTATGGAAACATCTT 14446 28 100.0 32 ............................ ATATTAATTTCTTAGATATGGATAATACACAT 14506 28 100.0 32 ............................ AATTTGTTTTGCTGTAAAAGTAGCTGTCATTT 14566 28 100.0 32 ............................ ACCTGAAACATAAGTTCCAACCTTAAGTGTTA 14626 28 100.0 32 ............................ AAAACTTGCTTTAACTATGATTTAAATTTTAA 14686 28 100.0 32 ............................ TATATACAGATTCTTATTTAGAAAGAAGAAAG 14746 28 100.0 32 ............................ AATAGCTATTAGTTGTAAATTCGCCCCATTGT 14806 28 100.0 32 ............................ ATTCTATCAAATCCGATATTATTGCTATTATC 14866 28 100.0 32 ............................ ATTATATTTAATTTCTTGTTTTAATAAATATT 14926 28 100.0 32 ............................ AGCATATTTATAACATCTCACTTCACTAGTAT 14986 28 100.0 32 ............................ ACTTAATCAACAGCTAGCAGAAGAATATGGAT 15046 28 100.0 32 ............................ ACCAAAATTAGGCTCTTCACCACCAAAATTAG 15106 28 100.0 32 ............................ AGTTACTTCTCCAAATTCAGAAACCTTAGCCA 15166 28 100.0 32 ............................ ATTAAGCAAGAAAATAGATAAATTAGCGGAAG 15226 28 100.0 32 ............................ TTTTTTAAAGCATCCATTAGTTGAGCTTCTTA 15286 28 100.0 32 ............................ ATGCAGTTGAGAAAAAAAGAAGTTTTCTTTTT 15346 28 100.0 32 ............................ TTATAGCGACGATACTATAAACAAAGCCGTTT 15406 28 100.0 32 ............................ TACAACTGATTCTAACGGCAATATTTTACCAA 15466 28 100.0 32 ............................ AGTCATAATTCCAGAAGGAGTAGTTGTTCCTG 15526 28 100.0 32 ............................ GATTAATGCCATTGCTTGGTCCAGTGATTCAT 15586 28 100.0 32 ............................ ATTAATGTTATTATATAAGTATATATTATCTT 15646 28 100.0 32 ............................ ATAATAGGAGCATATATAAAATGCTCATAATA 15706 28 100.0 33 ............................ TTGTGAAGATGTTTCATACTTTGGTAATATCTT 15767 28 100.0 32 ............................ CTATTGAATTAAGTTTATTACTTAAAGATAGA 15827 28 100.0 32 ............................ ATATAAACCCCAACCCGCTTTTCTTTGTATAT 15887 28 100.0 32 ............................ AATATAGAATGGTTCTTTAACAAATATATTTT 15947 28 100.0 32 ............................ ATATATTGTTTAGTTATTGTTTCTATATAACA 16007 28 100.0 32 ............................ AGATATTAAAGAAAAAATAGAGATATAACACT 16067 28 100.0 32 ............................ AATTGCATCTATACGAAACATTGCAACAAAGA 16127 28 100.0 32 ............................ ATAGTTTTGAATTGTGCATCGTTTAGATCTAT 16187 28 100.0 32 ............................ ATTCGTATTAAGAAAGAAGATGAAGTTATTAA 16247 28 100.0 32 ............................ AGGTTCTTTCGTTGTAAGATGTCCATAAACAA 16307 28 100.0 32 ............................ AGTAGCATTTAAATTTTCTTCATCAGGATTTA 16367 28 100.0 32 ............................ CAAAACTCTTTTTTATAAAATTCTACGACCCA 16427 28 100.0 32 ............................ TAGATAATGGAAAAAGAATTGAAAAAGAAAAA 16487 28 100.0 32 ............................ GCAATGTTATCCGGATAAATATTTTGTTACTC 16547 28 100.0 32 ............................ ATTACATTATTAATTGTACAATCTGTAACACT 16607 28 100.0 32 ............................ TTTATAATGAATTTTACTAAACCAATTAAATA 16667 28 100.0 32 ............................ TATATCTGTACTTCTACCACATACAATACGCC 16727 28 100.0 32 ............................ ATTTTCTATAGCACTTTTAGGAATACTTACTA 16787 28 96.4 32 ...............A............ TGGTAATGTTAAGAATAATGTCACCTTATACA 16847 28 100.0 32 ............................ ATATTATCTATTTGTTCACCTGTTGACAAGAC 16907 28 100.0 32 ............................ AAGAATGTCTATAATCTTTTGACTATCAAAAT 16967 28 100.0 32 ............................ AATTAAAAGAACTTATGACTACTGGAAGAGAT 17027 28 100.0 32 ............................ TTTAAACAACTTTTGTATAATGTTTTGATTAT 17087 28 100.0 32 ............................ TCTTAAATCGACTTTACATACTTTATCAATAA 17147 28 100.0 32 ............................ AATAAATACCGCTCCAACGATTATGTAAGAAA 17207 28 100.0 32 ............................ TTTAGTTAAAACTTGTGAATTTTCAGTATCAG 17267 28 100.0 32 ............................ TCTTTTTTTTCGTGTGGTTAATTGTTTTAGTT 17327 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 81 28 100.0 32 GTAGACTGCCGAATAGGTAGCTTAGAAA # Left flank : TATAGAAGAATACTTAAAAAGACTTTCTGAGTATGTATTAATTAGTGAAATAAAAGAAGTTCCAACTAATATAAATGCATACGTAACTTTTAGTAGAAAGCAATTTAAAATTAATAAAGAACGCTTAGTGAGAAGACAAGCTAAAAGACAAGGAATAAGTATTGAAGAAGCAAGAGAAAATTATAAAGATTTTGATGAAGAAAATAAAAGAAAAGAAAATAAGCTTCCATATATTAATATGAATAGCTTATCAAATCAAAATAAAATGAAGGTTTTTATAGACAAGACTGTAAAAACAGAAGTAATAAAAGGTTTATTTACAACTTATGGATTAAGCAAGACTTCAACAGTTCCATATTTTTAGATAAAATACCTAATTTTTATCTATCTTTGTGAAAGACCAAAGTAAGGGCTTTAAAAAGAACATCTAAAATAAAGGTTATTTAAGTAAGTATCTTAATAAGCCTAGCTATACTAGGATTTTGAAACAATATTTTGCT # Right flank : TTCAGTATTGAAAACCAAAATTTTCAAATTTAATTATATAAATGATTAATTCTGAGTATGAATTTTAGCTTACCCCCTTTACCATCTCTAAAGCAGAGTTTATACTAAATTTTCCTTTTAATTTGGTGCATTTCAACTAAAGAGTTTTTATATGCGACTAAGTTGCATTTAAATATTGTTCGCTAAAATTAAAAACTTACAATTAGTTTGCAAATTTTTAAAAGAGTGGTTTATGAAAAGTTTCATAATTTTATTTTTTGTTTCAACTATAACTTTATTTGCCCATCTTCATACTTTCATTGATATCTTTTCTAAAATTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGACTGCCGAATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 276795-278185 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCWF01000002.1 Poseidonibacter antarcticus strain SM1702 1131d_scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================ ================== 276795 36 91.7 30 .AAA................................ TGTAATTATCATAGCCTCCGCACCTTTGCT 276861 36 100.0 30 .................................... AGTGGAAAGCTTGAAACTCAACAATGGGAA 276927 36 100.0 30 .................................... TATTCTGACACGCCTAAAATTGGCTATGTA 276993 36 100.0 30 .................................... AGTAACAAAATCATCATTATTTTGTAAAAT 277059 36 97.2 30 ................A................... TCAAAATGACTTATCAAAAAGTAGTCATAA 277125 36 100.0 30 .................................... TACATTTTTATTTTTAATGAAAACAAAAAG 277191 36 100.0 30 .................................... TGCATTTTTTTCATTGCTTTTTCAATATCA 277257 36 100.0 30 .................................... TACTTTGCTGCTTTTCTTACTGCGTAATTT 277323 36 100.0 30 .................................... TAGTATCATCTTATATGGAGATACCTAAAG 277389 36 100.0 30 .................................... ATTGAATCAGTTGATACTTCAGCAACTAAT 277455 36 100.0 30 .................................... GGAGTACCTATGAAACATACAAGAAAATAT 277521 36 100.0 30 .................................... TAACCTTTACTGAATAATTCATCTTCTAAT 277587 36 100.0 30 .................................... TGGAGTTCTTAGACCAAGCAAGTAAAGAAT 277653 36 100.0 30 .................................... ATTCTGCTTTAGCTAGCCATTTTAAATTAA 277719 36 100.0 30 .................................... CAGACAAGCCTGAGTCAACTACATCATTAT 277785 36 100.0 30 .................................... AAAAATCAAAAGATAGAAAAAAATTTATTA 277851 36 100.0 30 .................................... TCCTGAAATTGTATCATAAAAAACTTAAAT 277917 36 100.0 30 .................................... GAGGTTGGTACAAATAAAGTTTTAGAGGTT 277983 36 100.0 30 .................................... ACAGCAACAGATTTTGACACGGCAACAGTA 278049 36 100.0 64 .................................... CGATAAAAAATAAAACTTTTTATCAAATTTGTACTTTTATAAATATTATGCTAAAATTATTAAT 278149 36 83.3 0 G..A.........A......A.............CT | A [278168] ========== ====== ====== ====== ==================================== ================================================================ ================== 21 36 98.7 32 ATTGTATCACATAGCAGTTTGTAGGGGTATTAAAAC # Left flank : TGGAACATTTACAATGCATACTTTTGAAATTTCATTACTTAGTTTACTTGCTATTGCAGTTGGATTATTTTTTGGAGTTAAATTAAAAAGAAAAATTGATAAAGAACTTTATAAAAAAATATTACAAGGATTATTATTCATTATTGCTTCTATGTTAGTTGTTGTAAGTGTTTAAAAAATTTATTAGTTGATTATAAATTAAATGATAATATAACTATTACAAAAAATAAATACCAAATAGGAAAATAATGCAAAAAAGTATAGTTGTTGGTGGGTTCAACAAAGAACAAAGAGAAAAAAACCTAGAAAAACTAAAAATAAAATATGCTAAAAAAGGTTATAAATTTCTAAGCTTCAAAGAAAATGGAGCTTTGAAATCAATTGCAATTTTTGAAGTAGATGAAAATATTTTGAAAAAAGAAAAAGCAAAAAGTCTTTATATAGTAGCTGGAATATTTATATTGCTTTCAGTTTATTTATTTGTTAAGGCATCGGTTTAG # Right flank : TAAGGTTGCTATTTTAGCAACTGACTTTAGGCAGTGGTTTCGACCACTTGCCCTTTTTTAGAAAAGCAATAATTGCTTTGGTTCATTTTTTTCTTCAATACTTTGCTCTCCAATTATTATATCCATAGATGCAAACTGTTTATCTGTAAACATTAGTATTCTTATATTTCCATTTTTTATATTTGTTTTTATAAACTTTTTTATTCTTTTTTTACCTAATTTCGCCGATTCTGTTGAACTAAATATTTTTCCATATACAGAGTATTGAATCATACTATAACCCTCTTTTTCTAGTTCAGCATGAAACCAATGATATTTTTTTCTTTGTTTTTTTGTTTTGGTGGGTAAATCAAACATTAGCATTAACCACATAATTCTAAAGACACTCATATTTAAAATACATCTCTTTGATACTTGGATAAAGAATCAACGAATTATCATCTTTTATCATAGCCTTTTTATAATTCATTACAAAAAGTTCTACAGCTCTTGGAATATTA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATCACATAGCAGTTTGTAGGGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //