Array 1 214585-216833 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXCE01000005.1 Moraxella catarrhalis strain MC24 MC24_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 214585 28 100.0 32 ............................ TCCATGTTTAATGATTCAATTTTATCCTAACA 214645 28 100.0 33 ............................ TCTACTTCGTCATGTTTACCGTAAACTTTACGC 214706 28 100.0 32 ............................ TGCTGTTTCTTTGACAAATGCTTTAGCTGGTA 214766 28 100.0 33 ............................ GAAAAAACTCTTTAATCAAGCGTTTTTTGGCGG 214827 28 100.0 32 ............................ TAAAAAAGGCGGTATTTTATGCTCGTCGTGCT 214887 28 100.0 32 ............................ CAAACAAAACGGTAACAACTCGGTAATCTCAA 214947 28 100.0 32 ............................ TTTGGCATGAGCATCTGAGAAATACCGCCTAC 215007 28 100.0 32 ............................ AGCCGCCCGCACACACACAAAACGCATATAAG 215067 28 100.0 32 ............................ TTTGGCTAAAATGTACCCACATTTAGGCATTC 215127 28 100.0 32 ............................ GTGGGGTCATACGCCCCAAAAATGATGGCCAC 215187 28 100.0 32 ............................ ACAAAGTCAAACACCCACGCTTTACTCACCGC 215247 28 100.0 32 ............................ AGCTTGCCACCGCTCAAAACGAGCTAAGCACC 215307 28 100.0 32 ............................ TGACGAATCTAGCCGTATTCAGTATTTAGCAT 215367 28 100.0 33 ............................ TACTAGATGGTGCTAGAACTGAAGAACAATTCT 215428 28 96.4 32 ........T................... ATGAATATTGCAAATTCACAGATTTTTGATAT 215488 28 100.0 32 ............................ GGATGGGGTGCTATTTATGCATAGAAAAGTTT 215548 28 100.0 32 ............................ AAGATGGTAAGATTATTAGTCTAACCAATCAA 215608 28 100.0 32 ............................ AGAATACAACTGCTTAGTGTATTACCCAAGCT 215668 28 100.0 32 ............................ AAAAGGCGGCCAATACTTTGATGCAGGAAACA 215728 28 100.0 32 ............................ AGGTGGGAAACAAAACAGGGCTTTGTGCAGTA 215788 28 100.0 32 ............................ AAGCAAGACAAAACATTTGCTTTAGGTGAGTT 215848 28 100.0 33 ............................ GGCTTTTTAAAGAATTAAACCGTTGGACGATCA 215909 28 100.0 32 ............................ AGGTGGGAAACAAAACAGGGCTTTGTGCAGTA 215969 28 100.0 32 ............................ ATATGGATATAAAGATAAGTATTCTGATAAGT 216029 28 100.0 27 ............................ GAAGATCAGATCTATTATTGAGCGAGC 216084 28 100.0 32 ............................ AAACTTCGGTCGATTTTGACACGGTTGAACGC 216144 28 100.0 32 ............................ GTGATGATGTTGAAAAATATGGCAAGTTATTT 216204 28 100.0 32 ............................ TTATGACACGCTTGGCACTGATTTTAGTGATA 216264 28 100.0 34 ............................ CTGCGAAACTCGGTCATTCGCAAGTTTTGCAAAC 216326 28 100.0 32 ............................ AAACTGCCAGAGGTGTGCACTGGCAAGCCTTT 216386 28 100.0 32 ............................ ATGACGATGCTAACAGAAGAACAAGCAGATTT 216446 28 100.0 32 ............................ TCCAAAAACTCACACAGATAAAACGTGATTAA 216506 28 100.0 32 ............................ TTAGCAAGTCTTAAAACTGCTTATTTTTTTAA 216566 28 100.0 32 ............................ AACTGCTTATGGCTGGATTATACCAGTACCAC 216626 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 216686 28 100.0 32 ............................ GCCCTCAAAACTGGTTTGCAGTAGCTGATGTG 216746 28 100.0 32 ............................ CCGGTTTGGGATTGCGAAAATGGATAGATGTT 216806 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 38 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACTCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTACAGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGCGCCAATGCCGAAAGCTATAATGCCCAACGCCGCATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAATCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTACAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //