Array 1 213106-211062 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKH01000006.1 Endozoicomonas numazuensis strain DSM 25634 scaffold00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 213105 29 100.0 32 ............................. GTTAGTGGCAGCACTGGCCTTTTTTTGTGTCG 213044 29 100.0 32 ............................. TCTCATTAGATAAACAGCTGGAAATAGAAGCG 212983 29 100.0 32 ............................. GCAACGCCCTAGAATCATCCCATATAAAATCA 212922 29 100.0 32 ............................. CCTCCGGGTCACTTGGGCAGTTGAAAAGGGAA 212861 29 100.0 32 ............................. ATATTGAGCTGGCCGACGAAATCCGGAGGCTG 212800 29 100.0 32 ............................. TACTGACCATCGTGACACTTGGCCGTGAATCC 212739 29 100.0 32 ............................. GTATCCGCTCTGGTTATCAGCAACAGCAATCA 212678 29 100.0 32 ............................. CCAGAATTGAAAATTACTCACCAGTATGCAGA 212617 29 100.0 32 ............................. AAGACGGTGACGAAAAACCCAGGGATATAGAA 212556 29 100.0 32 ............................. ATACTGGCATGTTGTACGTCCGGTTCTATGGT 212495 29 100.0 33 ............................. GACACTGAAAGTATTCGGAGCCAGCTCGTATGC 212433 29 100.0 32 ............................. CTTTCTGATACAGCCCAACTATTACTACATAA 212372 29 100.0 32 ............................. AGCGGCTGATAAGCTAACCTCACAGTTTGAAA 212311 29 100.0 32 ............................. TTTCACGACTTTTCCTTGAGAGTCATCCCATC 212250 29 100.0 32 ............................. GAAGTGTCTGCCGGGTATCGGGTAAACAAGAT 212189 29 100.0 32 ............................. CACCCACAAGGAGCAAATCGTGTTTACGGGAT 212128 29 100.0 32 ............................. GGCTTTGACATCAGTTACAGCTGCACGTTGCG 212067 29 100.0 32 ............................. GGTAGCGACCGATAAAATGATTGCTGCAGAAA 212006 29 100.0 32 ............................. TTGGTTTTGGCTAGTGATTCGAGACCGTATGA 211945 29 96.6 32 ............T................ TTTTCGAGCGAAACAGGCTGGTCAGAGAGTTG 211884 29 100.0 32 ............................. TATGCTGACTGGTTGGCGAGTAAACCTCGCAC 211823 29 100.0 32 ............................. CGATTGAGTTATTCCACAATGTCTAAAAAACA 211762 29 100.0 32 ............................. GAACTTCAGTGAAATAACTAAACCCACCAGAT 211701 29 100.0 32 ............................. GTATGACGCTGAAGAGTAATAGCCAGAAGCGG 211640 29 100.0 32 ............................. GGTAGAGGGGTAGCGTTAAAAAACACGATAAA 211579 29 100.0 32 ............................. ATCCTACAAACATGTTAAACAGGCTGTCTGAC 211518 29 100.0 32 ............................. TTTCATTAATCCCAGAGGAAGGAACTTCAGTG 211457 29 100.0 32 ............................. CTTTTTGCCCATTCACAAAACCATTAGATGCA 211396 29 100.0 32 ............................. CATCCTCTAAATTAAAAGGAACATCAGCAGCT 211335 29 100.0 32 ............................. GGCTGGTCTATCTCCAATGGAGTCGCTAATAA 211274 29 100.0 32 ............................. CATCCTCTAAATTAAAAGGAACATCAGCAGCT 211213 29 100.0 33 ............................. TGAGTGAGGAACATATCGGCTACACCCTCAGGC 211151 29 100.0 32 ............................. TTCACCAGGCACAATGCAGAGCGTGGATGCGT 211090 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.9 32 GTGTTCCCTGCGCCCGCAGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GTAATTAGATTGTTGTTATTTAAAATAGGAGGTAAGTTGCACTTAAAATACAATGTCAGTTGTTAATAGATATAGCTGAGTCTATTCAAGAACGGGGTATTTTTGGAGGTATCTAATATACTTGAGCTTGTGTGATCATTGGTACAGTAAGGAGGCATAACAACTTTCGACAGAAGTACCACCTACCAAATAAGTGATTGATGTCACTGAAGAAAAGCCCACCTTTATAGTGGTTTTTTTTATGCCCGTCGTAACATCATCGTAAAAAACTCGAAAAATAACGATAAAATTTCTAAACGTTTCAGGCTCAGTCCAGCCTTTACAGACTCGTATCGGATCTCGTGCCCTTCCTGGTACTCTGTCGTTATTTTTCCAGTGGAGTGCCCCATTAGCATCTGGACATATTCGTGGTTTAAGCCTGTTATGGTGTAAAAAATGGCACAGGATCTGGAAAGCAGTGAGCTCTTTCGCCACAGAAAAGAGCCATAACAAGCAGGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCCGCAGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCCGCAGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 215371-214243 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKH01000006.1 Endozoicomonas numazuensis strain DSM 25634 scaffold00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 215370 29 100.0 32 ............................. GTTTTCGGATAGGTTACACACCTAATGATGCT 215309 29 100.0 32 ............................. CCTTAGAGGGTGACAATAACGGCCTGATGTTG 215248 29 100.0 32 ............................. AACGCTCTTTTTATGTCAAACAAAACAGGACA 215187 29 100.0 32 ............................. GATTCATCATTGAGGGAGCCTTGAGCCAACAT 215126 29 100.0 32 ............................. GGCAATAGGGCAACGGCCTATCACATAAACCA 215065 29 100.0 32 ............................. CCCTACCTTCTGCCGGTCATAAGCTCGCTGCA 215004 29 100.0 32 ............................. CATTGAGTTGGTCAATAAACGGCTGGGCAACG 214943 29 100.0 33 ............................. GTTATCGTCAGATCGAAGTGAAACAAGTTCAGC 214881 29 100.0 32 ............................. GTGTGGCTGGAAGGTGAACGTGATTATCCGAT 214820 29 100.0 32 ............................. GTACGCTTTTCCCTCAGCTGAATCTTCATCGT 214759 29 100.0 32 ............................. CGCCATTGATCGCCGCCAAACGATCCGCTTCA 214698 29 100.0 32 ............................. CAAACATTGGAAGTTAGAGAGTTGGGTGAAGT 214637 29 100.0 32 ............................. GTAATATCCAGATTGGTGATTACCTCATCACG 214576 29 100.0 32 ............................. GTGTCGTATCAGGTGATGATTTTACAGCAGGA 214515 29 100.0 32 ............................. GGTCCCAAACCCTTGATATCTGCGTCTGTAAT 214454 29 100.0 32 ............................. GTTGAACGTGACTTGCGTTCTATCTTCGAGCG 214393 29 100.0 32 ............................. CTGATCAGAGGTCAGCAATATCGCATCAGGGT 214332 29 100.0 32 ............................. TTTGTGCTTACCGTGAGCTGTTGCTCAGGGCA 214271 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 100.0 32 GTGTTCCCTGCGCCCGCAGGGATGAACCG # Left flank : GGCCGCTGGAGAAATCACGCCACCTCCACCTCCAGAAGATGCACAGCCACCGGCCATTCCTGAGCCTGTTTCTATAGGGGACACGGGTCATAGGAGTAGCTGAAATGAGTATGCTGGTTGTTGTGACGGAAAATGTGCCACCAAGATTAAGAGGCAGGCTTGCCGTATGGTTACTGGAAATAAGGGCAGGTGTTTATGTTGGCGATGTTTCCATAAGAATCAGGGAGATGATCTGGGAGCAGATCACTGCACTTGCTGAAGATGGTAACGTGGCTATGGCCTGGGCAACCAACACTGAATCCGGGTTTGATTTTCAGACCTACGGCAAAAACAGAAGAATCCCCATTGAGGAAGATGGTTTAAGGCTGGTTCTTTTTCAGTCCGAAGAATGATCAATTTGCTCTTTAACAATGGAATTTTTTCAGTGAATTTTTTGCTGAATTTGCTGGTGGAATATTTAGGTCTTGCAACGTACTGATTTAATAATGTATTTTTTTAGA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCCGCAGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCCGCAGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //