Array 1 126-454 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000127.1 Nostoc sp. UIC 10630 NODE_209_length_24973_cov_43.9393/0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 126 37 100.0 37 ..................................... AAATGCGCCTATGAAGGCATCCTAGTAACGTTTGAAA 200 37 100.0 36 ..................................... GATGTGACAAAAACTGACTTTTGTAATTATTCTAAA 273 37 100.0 35 ..................................... ACAGGTGCAGCATCTTCCCAAAGAAAAACTTCAAA 345 37 100.0 36 ..................................... CTCATCATTTCGCTTACTGGGGCAATCGCTCTGCTC 418 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 100.0 36 ATTGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Left flank : TTGTCTGTTTGGAGGGATTTTCTTTTTTCTCTACCCCTATGTCATCCCTCTTCCAGAGTAACTAGCAACTTGAGTTATTAGGGATTGAAACAATAAAATTACCTTCAGTGCCATCTTTCGCATAGA # Right flank : CAGATTTAATAAATTTTGCTGATACCCAGTCCAGGGTTAGCGCGTCTCAAACCCTATTGACAGGCGGATAATATTACGGAATTAGAGTTTGAGATAGCAGAGACCAACACAGAACACTTGTCAAATGGAACACATTGCAATAGTTGTTAATATAATTAAAATAGTTAGTAACAGTACGTAAATTTATATCTAGCTTGAAAAGATAAAATAAGTGTTATGGAATAGCAACAAAAGTTTTTATACCATTATTGTGCAATACGGTTCAGTTAAGCAAAGCACAACCCAACAAAGCCCCGAAAATGTTGGGTTTCGTTCCTCAACCCAACAAATTAAGCTTGCCGCACTACTACACATTTCAAGGTTTTTGGCGCTAACTGAACCGTATTGCATTATTGTGGACTATTGCTTGTAAGTGTATTGCAAATAAGTCAACGTGAAAACCGACTATTACGGCATAGGAAAAATAAAGCTACCATTAAAAATGTTAAAAAAGCTGAGAA # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 6005-3742 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000005.1 Nostoc sp. UIC 10630 NODE_17_length_117991_cov_36.4863/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 6004 37 100.0 36 ..................................... ATATAAAATCACAAGAAGAAATAGACAGAAGACTAA 5931 37 100.0 39 ..................................... TTGATAACCCACCCAGGAACAGGAGAGAGTCTCAACAAG 5855 37 100.0 37 ..................................... CTGCATTTATAGGTCGCCTAACTTACATAAAAAGTGG 5781 37 100.0 36 ..................................... TAGATATTAAATAGTCACCATTGCCATCAAAAGCTA 5708 37 100.0 37 ..................................... CTGCTTTGCGAGTCTCAATTTTTTGCCATGCTTGCAA 5634 37 100.0 42 ..................................... GTGTGTGGGTTCCTGTGGAAGCTCCCGTCACAGTTGACTCAG 5555 37 100.0 35 ..................................... ATAGGGGGATCAGGCTTTGAAGCCTACGAAACCCA 5483 37 100.0 36 ..................................... ATAAAAGTAGGAATGGTACTTGGATTAACGGTCAAA 5410 37 100.0 37 ..................................... TTCTTCTACGTATTTCCTAATATCTAGATTAACTGTT 5336 37 100.0 34 ..................................... ATAAATTCCTTTCACTACAAATTCATAGGTTTTT 5265 37 100.0 36 ..................................... ATTCAGGCATATACATCCATCCGATAATTTCCCCAG 5192 37 100.0 38 ..................................... TCCCCTATTAGGGGACTTAACTATGAACATAACGACTG 5117 37 97.3 37 ...................A................. TAACTGAAACTCAAGCCAAGATTAAAGGTGCTATAAC 5043 37 100.0 38 ..................................... GTTGATTGTGGAAAAGCAGCGAGTCGTTCTCCTATAAT 4968 37 100.0 38 ..................................... ACATAATTTTCGCAACTTTCCCCGAATATTCCTCCCAA 4893 37 100.0 35 ..................................... TCATAAAAGAATCTGAAGCCGCTAACTACCTTGTT 4821 37 100.0 34 ..................................... ATGGCATCCAATGCGTCAAAGTAGAACAACATGA 4750 37 100.0 37 ..................................... ACATTGTCGTTATTTGCAAACAAAGGCTGACTAGTCA 4676 37 100.0 36 ..................................... CGTTACAAATCTGTTTCGCAGTAATGGTTTTACTAG 4603 37 100.0 32 ..................................... TTCGCCAAGAGCTAGGGATGGAACCACGCGAA 4534 37 100.0 38 ..................................... CTTTCTTTCACCCTTTTCATCTACACCGTTCTCCTCAG 4459 37 100.0 37 ..................................... ATTAAATCGGATAAACGAGCGATCGCTTCTCCAGACT 4385 37 100.0 47 ..................................... CTTACGGAGTAACAATCATCGTTATTCACCATGCAGGGCATACAGAG 4301 37 100.0 38 ..................................... CTGAGGTGGCAGATAGGTAACTAACCATAGGTTTTAAT 4226 37 100.0 35 ..................................... ATAGAAAACTATGCTCAAACAGATTAATGCTTTAG 4154 37 100.0 39 ..................................... TTCTCTAGGGTTTACTTGTTCAGATGAACTAGCTGATAG 4078 37 100.0 36 ..................................... AAACAGTGTACATCGACAAAAATCAAATTGTAGAAA 4005 37 100.0 39 ..................................... ATAAAAATTATTCCTGGCTTGCGAGATGATGGGTATGGG 3929 37 100.0 41 ..................................... AAGGATTGCCAAGGGCGGAAGAACTAGCAGTATGTCTGTCA 3851 37 100.0 36 ..................................... CGCGATCGCAAAAGTTTGGAAGTCGCTGGAGCTTGG 3778 37 83.8 0 ......................A..T......TTGG. | ========== ====== ====== ====== ===================================== =============================================== ================== 31 37 99.4 37 GTTTCCATTGACCAAATCCCCTCACGGGGACTGAAAC # Left flank : AACAAATCTGCTGGGAGAGCGAATTGAGGAACTGATAAAATTATTTACTGCACAACGCAAACGGACAGGAGGGGAGCGAACAGATAAAATTGCTGTTACCTGGGCAACGATTTTGGCGCGGCGGGAAATGGGGGAATCATTGAAGGTAATCGCCGAAGATTTAGAGATGCCGATCTCGACCGTGAAAACTTACGTGAAATTAGCCAGAAAATCCCTAAAACAAGAAAATAATAGTTGAAAACCTTTACTTGTGGACAAGTATAAGTAATTGTTTTATGATTGGGTAATCAAATTGATGTTTGGCAAATCGAAGCGGGGTCTAAAACCCTAGGGGTTCTGCCAAAATCGCCAGAACCTAGACAATTAAATGATTACAGCGTTTCAACAATTCAAGAAGTTGCAAATTAGTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTCCGATCTGCCAAAAAGCCTCCCAGGAAGCCTGCTCTGATTAAGTTTCAGCACCGAGCG # Right flank : AGGTGACAGACTGGTTGCTAGTAAGGAAATCCGGGGATGAGAAAGTAGCGACACCGGACAGCCCGTCGTAGACATCGCTCTTAAAGCAAAGCGTAGCCAATCGATTTTCTCTCTTACTGCCGAAAGTTCTGCTGATGTGTGGCATTGGTAGGAAATCTAGCGTGAGGATTAGGTTTGGGAGCTTTTGTGTTAGAAACGCTACTGCTGAGGGAAAACTGAAAACAAGGCCCTGTTTTGAAGACTTTGATTGTAATTCATCAGCCGAAGGCTACAAATTACATAACAGAATTGGCAACGCATACATAAGTTCAATTCATAGTATTTGTGTACTATTTATTGACAAATAAGTACTTGTTGCTAAAATCTTTGAACAAAGTCAGGGTAAGTTTAGTTAGTAATTTTTTAGAAATGAAATTGCGAAAAAGCAATCTAATCAGGGATTCTCATGCAAGATTTATCAAATATTGACTTATTTTATGCTTATTTAGACTTAGAAATTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTGACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 10645-7568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000005.1 Nostoc sp. UIC 10630 NODE_17_length_117991_cov_36.4863/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 10644 37 100.0 37 ..................................... TTTCCCAAGAAACAGTTAATCTAGATATTAGGAAATA 10570 37 100.0 41 ..................................... GAGAGTAAATGCAAAATTCTAGGGCTGAATCGCCAAGAAGA 10492 37 100.0 37 ..................................... ATTCAGTGGCACGGGGAAAGTGCCAGGATAGTAAAAA 10418 37 100.0 36 ..................................... TTCCTCTGTCCATCAGAAATCCTCAGCAATTATTGT 10345 37 100.0 38 ..................................... TTCAATAACATCAAGAGTGAGTTTCAAGACTTCCGCAC 10270 37 100.0 37 ..................................... CAACTCTTCTCTATATTGAATGCTGATAACTATCAGC 10196 37 100.0 37 ..................................... TTTGTGCCCAGGCTTCGTATGCTTCGCAACACGCGAG 10122 37 100.0 38 ..................................... TGTACAAAGCTACTGTCTCTATGTAAGAGTACGTAGCC 10047 37 100.0 36 ..................................... GATTCATTGTAGGTTAACTAGCGATCGCAACTAATC 9974 37 100.0 36 ..................................... CAGTTTAGTTGCGTCAATTAACTCTTTTTCGATGAC 9901 37 100.0 35 ..................................... CTGAACAATCTACCGCGCAGAGGGAAGTTGTTAAA 9829 37 100.0 35 ..................................... CGTAAAATTACTTAGGAGTCCCGTTTCCTTTTAGT 9757 37 100.0 35 ..................................... TTCATCTTTTATGAGTACTAAATTATCATCATGAG 9685 37 100.0 40 ..................................... TGCTTCTAATCTGAGTAAAAATCAGCGATGAGCGACTGAG 9608 37 100.0 39 ..................................... ATCCATCTTAGATGACCCGATCAAATCGGGTCATCTAAG 9532 37 100.0 40 ..................................... AATCCTTGGGCTTGCATATTCTTAATAAACTGAAACTGGG 9455 37 100.0 39 ..................................... ATCTATCTGAAACCTCTAAGTTAACTAAATATATCTAAA 9379 37 100.0 39 ..................................... GATTGGTGCAGCCAGTGCGAAGGCGTTGGTATCAATGGC 9303 37 100.0 37 ..................................... CTGGATAAACTCTATCGCCATCGGCTTGAATGGTTTG 9229 37 100.0 38 ..................................... AACAGCTTGGGAAAGTCCTAGGCGTTGGTATCTCTGAC 9154 37 100.0 38 ..................................... TTGACTACCGCCAATTCATCTAGTTGGAATGGGCGAGG 9079 37 100.0 40 ..................................... GCTTCGATAAATCCATCGAAGTCACCTGCATGATTCTCAC 9002 37 100.0 35 ..................................... GTAGTTGGGGAGTCAGGGCAAGCAACATTTATTAA 8930 37 100.0 40 ..................................... CGCTCATCAACTTGAGCAGGCTCAACATTAATAATCTCAA 8853 37 100.0 36 ..................................... TCAGGAACAGTAAGTATAAAAATAATTGTACTTTGG 8780 37 100.0 35 ..................................... CAGCATGAGTAAATTTGTTGCAGGAAGATCACCAG 8708 37 100.0 36 ..................................... ATAGGAAAATTAAAGAGCAAGATTTACCCCAATTAG 8635 37 100.0 39 ..................................... ATAGCTGGAGAGCTTCCTTACCGGGAACTTAATATAAGG 8559 37 100.0 36 ..................................... TATTCTGTCTTCCTTTAGGTCTAGGTGGCATATTTA 8486 37 100.0 36 ..................................... ATGCTAAATCAGCCTTGCTACTGCCAGCGATCGCTA 8413 37 100.0 35 ..................................... CAGAAGTACCAGCAACAGACCCAATGTTCGCCTTA 8341 37 100.0 36 ..................................... TATTTTAGCGAATTCGCTCCTACTATTTGGCGTTGA 8268 37 100.0 36 ..................................... TTTCATCAGCACTCGGTAAAGGTCTAGACTCACCTG 8195 37 100.0 40 ..................................... ATTTTGGGAGAGTTGGAAGATATGTACTTGGAAAATCCAG 8118 37 100.0 34 ..................................... TTAAGACTATCTGCTGGAAATGAGGGTAGATGGG 8047 37 100.0 38 ..................................... AACTATTTGTTCTGCTACTTGCCCACGCCGACCCTCAA 7972 37 100.0 36 ..................................... CTCAGAAGCATTAGCACAGCTATCTGACTAACTACC 7899 37 100.0 36 ..................................... GTTTCTGCACTGTTTATAAAAGAGTAAGGACTAAAT 7826 37 100.0 34 ..................................... AACTATTTGATTTGGAAACTGTTTACGTCCTTGT 7755 37 100.0 40 ..................................... CAAAAAGATGGAAAGACTCTCAGGCAGAGATTGCACTCAA 7678 37 100.0 37 ..................................... AGATAACTTACCGCTAACTATGAATTAAGTTTGTTCT 7604 37 97.3 0 ....................T................ | ========== ====== ====== ====== ===================================== ========================================= ================== 42 37 99.9 37 GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Left flank : TTTATTTGATTATTTACGATCTGCCTGATAACAAAGCTGCAAATAAACGTCGTACTCGCCTACATAAAATGTTGTCAGGTTACGGAAAATGGACGCAATACAGCGTTTTTGAGTGTTTTTTAACAGCAGTACAATTTGCTACCCTCCAAACCAAAATAGAAAAACTGGTTAAGCCTGAAGAGGATTCAGTACGATTGTATATACTTGATGCAGGTGCAATTAAACGAACAATTACTTATGGTTCAGAAATTCCTCGACAAGAGGAAACAATAGTCTTATGATTATGTAATCAGCTTGATAATTGGCAAGTCGAAGCGGGGTCAAAAACCCGGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAATTACAGCGTTTCAACAATTCGGGAAGTTGCAAATTAGTTGCAATAAGAACGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAAACCTTCCCAGGAAGCTTGCTCCGTAACAGTTTCAGATGGAGCG # Right flank : TTCAAAAAGTAATTGCGATCGCAGTTGTTCAAATTAGTTTTCGACAATTAACTCATCGCCAGGAGAATTAATTGTTGTTTGCCTTTTGTTAAGTCAAAGAGGATGGAAATTGCGTACAATATTGAGCATTATTTGTGAAGCCCTAAGCAATGCCAAGAGCAGCATCATCTACTAGTCGTAAACCAAAGCCAAAGCAAAAATCTGTAGCTTCTGTAGTGACATGGGCAGATGAGACAGAATTGGTGGGATTAGTGTTTGAACTGGAGTCAAGTGCTTCTGCTTTGCTTTATTCGCAGTACACGATTGGGCTGCACGCATGGTTTCTGGAGCAGGTAAGACAATTCGACCCAGACCTTTCAGCTTACCTTCATGATGGAGAGTCAGAAAAACCCTTTAATATTTCAGCGCTGTCAGGTCAACTAGTTGCCAGTGGCAAACAACTACGATTAGAAGCGAATCAAATTTACTATTGGCACGTGAATGCTTTATCTCAACGGGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 3 34237-32427 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000005.1 Nostoc sp. UIC 10630 NODE_17_length_117991_cov_36.4863/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 34236 37 100.0 37 ..................................... AAGTAAAGAATTTCCGAAAAGAAGAGATAGCTTACAA 34162 37 100.0 36 ..................................... TTTGAGAATGGGTGAATTGTCGCTGCTTTTCAATGA 34089 37 100.0 38 ..................................... GACTCTAGTCGCTGTTTGATGAAGTTATCCGCCATCAA 34014 37 100.0 36 ..................................... GTGAACGGGGAGATTACCCCTTGCAGACTGATTGAG 33941 37 100.0 36 ..................................... AAAAGAGGATCGTTTTAATAACGCCTAACGGCATCT 33868 37 100.0 35 ..................................... TAGAAGAAGCCAACATCAGACTTTACCAAGAACTT 33796 37 100.0 38 ..................................... TTTCCTATTTGATTAGTAAAGGGGAAATTGATAGCAGA 33721 37 100.0 36 ..................................... ATTTGTTACTACCAACAGAAGTAATCGACGACTCTG 33648 37 100.0 37 ..................................... AGAAAAATATCTCTACCTAAATAGCACAAACGCCAAC 33574 37 100.0 36 ..................................... CCGGAAAGAAAGCCACAGATAGTCGAAACCCCTGGC 33501 37 100.0 40 ..................................... AAGACAAGCATCTTTCACTTGATTCTAAATATTACGATAA 33424 37 100.0 36 ..................................... TGCAGAATGTGCCACCGAACAAATGGAAGAACCTGA 33351 37 100.0 33 ..................................... TGTAAAGATTCTGTAAATATACGTAGATGTTAA 33281 37 100.0 37 ..................................... TTTAATAATTTGTGCTTATGGATCAACATCGCCCCAA 33207 37 100.0 40 ..................................... ACCTTAACTTTTGCCCCTACTTCAATTTTATTAACGGCAG 33130 37 100.0 38 ..................................... TTACGCTAAGTTCTAATACTGGAAACGGAGAATCTGTA 33055 37 100.0 37 ..................................... AATATTTTATTATCCCTGGCAATTCTTACGCTCTTGG 32981 37 100.0 37 ..................................... GTTATCTTTTGGATATTCAATTACAAATTTTTCTATT 32907 37 100.0 36 ..................................... AGAACAGCATTTACTCCAGCGTCGGGGCAAACATTC 32834 37 100.0 36 ..................................... AACTGAATATCGTCGTCAGTTGAACTGCTGCTAATT 32761 37 94.6 36 .G........A.......................... ATTTAAAAATTTCCGATATCATGCTAAACCTCTTAA 32688 37 97.3 42 ..........A.......................... AAAAAGAAGATGCGGCATTTGCGATCGCATTTGTTCCAGCAG 32609 37 97.3 36 ..........A.......................... CAATAATATGCACACTTTTATTAATGTACTCCGAGC 32536 37 97.3 36 ..........A.......................... TAGATGGTGGAAGTGCTGCTTTGACATCTTGGACAA 32463 37 94.6 0 ..........A......................G... | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.2 37 GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Left flank : CGCCGGTTTCCACTAACCAAATCCCCTCACGGGGACTGAAACTTAGACCCAGAATCTAGATATCAGCTTTTTTTAGCGTTTCCATTAACCAAATCCCCTCACGGGGACTGAAACGCTGATAACAGCTACCCCAAGGACGCTTGGGATTGCAAGTTTCCATTAACCAAATCGCCTTCACGGGGGCTAAAACGTCGATGCTCCCTTCTGTTAGCTCCTCTGAAAGTGTTTCCAATAACCATAGTCAAGAAAATACTCGACAAACTTCAGTAATCGACATATTATTGCTGTATCAGCTTGATGATTGGCAAGTCAAAGCGGGGTCAAAAACCTTGGGGATCTGCCAAAATCGCCAGAACCTCGACAATTAAATGATTACAGCGTTTCAATAATTGGGGAAGTTGCAAATTATTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAAACCTTCCCAGGAAGCTTGCTCCGTAACAGTTTCAGATGGAGCG # Right flank : AATTTTTTATAACCAGTGACAGCATCGCAAATCTTTAAAATTAAGTTTTATACAAATTCCAAGTATTTTGAATTTCTAAAGCCATTTCTTCTCTCATTATCCAAGGTAGTAAAACTTCTACTTTTGAGCCTAAAGCACGCAACCATCTAACAACATAGTAGTCAGTTACTCGGTAATCCACTTGGTAATAAGCATCCGTACTAGGACGAAATTTAATAATGTCTAAAATAGCTTTTCGATGTTTAAGGTTTAGTGTGTATTGTTGAGTTAAATTGATAGTTTGCTCATAACTAATTCGAGTAAATGTATCATGGATACTGATGCCATTAATATAGCGTTGGTGAAAATCTTGCTCAAACCGCAATACCATTACTGCTTTTTCTTTATAAAAGTCACACCCCCATGCTTCTTTTAATTGAGTGTTAACCGTTTTAGGAGTTGGTAATTTATTATCCTGATACTTCTCTCTTAGTAATTGAGGAACACGGGGGTCTTCCCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 4 35947-34547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000005.1 Nostoc sp. UIC 10630 NODE_17_length_117991_cov_36.4863/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 35946 37 100.0 37 ..................................... TTTTGTTTTCCCATTTGTTAATCTCGTAACTACGGGA 35872 37 100.0 40 ..................................... AGTTGATTTTCGTTTAAGTGCTGACGCGATCGCACTTGAA 35795 37 100.0 37 ..................................... AGAAATATTATTCAACTAGTTTCCCTTAAGCAAGAAT 35721 37 100.0 42 ..................................... GTTAATTTGGGTTGCCACGGGAAAAATGCCCCGCGATTCGGG 35642 37 100.0 36 ..................................... CAAGATTGTCAGAGAACTTTTTCGCGGTATCTACCA 35569 37 100.0 40 ..................................... CCTATTTATTTTGATGAACAGCAAACAGAGAATTTGCTAG 35492 37 100.0 43 ..................................... AGTTGGGGACATTTTCAAGGCACACCCATTGAGGTCGAATACA 35412 37 100.0 36 ..................................... CAATGAGTATATGTGTTCGCCACATTGAGAGTTTAG 35339 37 100.0 36 ..................................... CGTTCGTACGCAGTCTGCTTTAGATGCTGAGTTAAA 35266 37 100.0 40 ..................................... GTCTAAAGATACCTTTAACATTATTATTAGAAGCTGCCAA 35189 37 100.0 38 ..................................... GCTGGTTTAACCGAGACTACTGAGAAAAAAGGCATATT 35114 37 100.0 39 ..................................... TAATTACTAAAATTGCCGAAGCTTATAACAATGTCCAAG 35038 37 100.0 39 ..................................... CAAGCTTTGTACAAAATTCGTGAGTATGCGGCACTTGCA 34962 37 100.0 37 ..................................... ATGCTTACTCACCTCTAGCTCGTGCCGTTAACTATGG 34888 37 100.0 42 ..................................... AAGCAAAAGCTATACAAGTTTGTGGGGAAGAGGAAGATTGGG 34809 37 100.0 41 ..................................... AATCCATGATGAAGTTAATTGCGATCGCAGTTTTGCCGCCG 34731 37 100.0 35 ..................................... TTAGACCCAGAATCTAGATATCAGCTTTTTTTAGC 34659 37 97.3 38 .......T............................. GCTGATAACAGCTACCCCAAGGACGCTTGGGATTGCAA 34584 37 89.2 0 .......T..........G..........G..A.... | T [34562] ========== ====== ====== ====== ===================================== =========================================== ================== 19 37 99.3 39 GTTTCCACTAACCAAATCCCCTCACGGGGACTGAAAC # Left flank : GTGGGATGGTGAGTACACAATTGGGTTGCAGCACCTGAAGTCCTTCAACTACCTGCCCGAAGAATGTCAGCAGATGCAATTAATCAGCGATCGCATCAGTCAAGTGTATTCCGATTTACTGGAGGAGACAGTCAAAAGTCTGTTGCAGTCGTTGGGGAAGCTGAATCGACCTTATCTTACTGCTGTGGAAGAGAAATTGTTGAGTTTGATTGAGCGAGAATACAGGCTTATAGATCAATCTCCACAAACTCATAGACAATAATAAATACACATCTTATGATTGGGTAATCAGTTTGATATTTGGCAAGTCGAAGCGGGGTCAAAAACCCTGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAGTTTCACAGTTTCAGTGCTAAGGGAAGTTGAGAATTAGTCGCAATAAGAGCGGCTGAAATCGACCTATTTTTGAGGTTTGCCAAAATGCTTCCCAGGAAGCTTGCTCTGTAACAGTTTCAGCACCGAGCG # Right flank : GTCGATGCTCCCTTCTGTTAGCTCCTCTGAAAGTGTTTCCAATAACCATAGTCAAGAAAATACTCGACAAACTTCAGTAATCGACATATTATTGCTGTATCAGCTTGATGATTGGCAAGTCAAAGCGGGGTCAAAAACCTTGGGGATCTGCCAAAATCGCCAGAACCTCGACAATTAAATGATTACAGCGTTTCAATAATTGGGGAAGTTGCAAATTATTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAAACCTTCCCAGGAAGCTTGCTCCGTAACAGTTTCAGATGGAGCGGTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAACAAGTAAAGAATTTCCGAAAAGAAGAGATAGCTTACAAGTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAACTTTGAGAATGGGTGAATTGTCGCTGCTTTTCAATGAGTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAACGACTCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACTAACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 6209-5876 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000060.1 Nostoc sp. UIC 10630 NODE_116_length_39445_cov_44.8032/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ===================================== ================== 6208 38 79.5 37 ..T...TG.....TT.-..............T...C... CTCGGATATCGCTTTTAGACTGCTATACGCTTTCTCC 6133 39 84.6 36 ...........T...C......A.A...A.........T ATGCGATCGCAGAGGCTGACTAAAGCTCTTGGCAAA T [6124] 6057 39 89.7 31 AG....T.............G.................. TTCTAGGGAGAATGAGATGTCGAGCGATCGG 5987 39 100.0 34 ....................................... TGTAAAATTTTGAAAGATTTTGCCCTTGGGTGCT 5914 39 100.0 0 ....................................... | ========== ====== ====== ====== ======================================= ===================================== ================== 5 39 90.8 35 TTCTTTCAACCCACCTCTAGCCGGGATGGTTGTTGAAAC # Left flank : TGGTGTAGCGAACACTTACCCATTCCACATGCTTCAGCGCTGCTGTAACTGGACTGTTGATTATCTCAGTGATTTAGAACTGGAACGCGTGCAGAAGATTTATTCTCAAAAAGAGCCTCAGCCATCGGCAACTGAATGTTAGAATACTCTATGGTGATAGTCTATTGAGTTAATGAGTAATATTACTCTTGACTTAGCAACGATTCAGGGGAATTAGCTCAGTTGGTAGAGCGCTGCGATCGCACCGCAGAGGCCATCGGTTCAAATCCGTTATTCTCCATTTGTACTGTAGAGCGACAAATTATTTGTCCGTAGCGACAAAATATTTGTCAAATTGTCCAGAGCGACAAATAATTTGTCATTACAATTTTGCGCTGCTTAACTTACTGCTTTAACTGTTGTACGATCGCAGCGCTCCTTTCAACCCTCCTAATAACTTAGTTATACTCTTTAACCATTTTAAAATTTGGTTAGTGCGAGTACATAGTTTCTATTACTTA # Right flank : TCGACCCGTCTATACCCTTATCAGTACAGGCTTCCAAATTTAAATTTGGCAGCGAAAGTACATAAACGCCTTTTCGTTCCTCTGACTAGAGCCTATCTTCGTGTATAAGAGATTGAAATTAAGGCTGGACAAGGGTTTTAATTTTTGGCGGGACTCCAGGAATTTTGCTCCCGCTTCGACACACCAAAAAAATATTTGGAGAGTTCCCCCGATGAAGGGGGTGATTCAGTAGCCACCACTGCGGTAATCCGCACCGTTGCTAGAACGGTTAGGGCTTAATAAGCCTTACTTCTTATTGCAGGGAGCGCACCTATCCTGTCTTGCGACAGCAGCATCAGAAGCGGGCAGCTACCAGGGACAGAAAGCAAAACGGTCTCACGACCAAACTAACCCAGATTTTTCGCAACACATTGGCTCTAAAGAAATTGGTCCTAAAGAGCATGAACTGCGGCGCTATTATTTCTATATTATATTTTCAAGGTTCAGTATTTCAACTAAAG # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.54, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTTTCAACCCACCTCTAGCCGGGATGGTTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.28%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 650-400 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000011.1 Nostoc sp. UIC 10630 NODE_37_length_83610_cov_43.6683/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 649 38 97.4 32 ...................................T.. TATATTTTTGAGAATCATTTGCAGCGCCTTAT 579 38 97.4 35 ...................................T.. TAGTGGTGTAGTTCAAGCACTTTATAAAGCACGAT 506 38 100.0 31 ...................................... GAGACAATTCGGGCGAGAACCATCCACAAAT 437 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== =================================== ================== 4 38 98.7 33 TGCAATTTATCAAAATCCCTATTAGGGATTGAAAGAAA # Left flank : TCTACTGTTCATAGAATTAACAGACATGATACGTAATTCTTCGCTAGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCGATAACAGACTTTGAAGACGTTGGCAAATAAAGTTAATCATGGGGGTGCTGGTATTTTGTAGATGTAGCCCACCCCGGCATCACTCTAACTAATCGAGTAGGGTATTTATAAGTAGGCAGCTTTCCAATCAGATTAGTTTTTTTGCTAAATGCGCGGATGGGTAGGTGTTGGGAAAGGGGTAACTAGAAAAATGGCTGAACTGTTCTATGTGCAAGAACTGGGGAGCGATGCCGGCGGCGGGCTACGCCTACGCATTTCAAACCATCCGCGCACCTTATGGAGACTAGTTTTCAGCCATTTGCCTCTAGCCAAATCACAATTCATCGTGTTATCATTTCAGCATTCGCGCAACCGAACCTCGAAAACCAAATAGGGCAAAGCTTTCAGAAGCCAGCAT # Right flank : AACAGGTGATTGTCACGGGAAGATATCATCTATTGCAATTTATCAAAATCCCTATTAACTCAAGTTGCTAGTTACTCTGGAAGAGGGATGACATAGGGGTAGAGAAAAAAGAAAATCCCTCCAAACAGACAATGAGGAGGAAGATATGTTAAATGAAATAGTTACGATCTATTCTGTGATAGATGACCTATTAAAGGCGATTGGACATGATCAGGATATTCGTTGTGAAATGAGTGATGCAGAAATTATCACAACGGCAATAATTGCAGCTATGTACTTTAGTGGTAATCATAGTAAGGCTTGCAGCTACATGAAAGATCATAATTTGATACCACGAATGTTAGAAAAGTCACGATTTAATCGGCGATTGCATCATGTCTCAATGTTAATTAACGATTTA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCAATTTATCAAAATCCCTATTAGGGATTGAAAGAAA # Alternate repeat : ATTGCAATTTATCAAAATCCCTATTAGGGATTGAAAGTAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 18294-17308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000063.1 Nostoc sp. UIC 10630 NODE_120_length_38638_cov_46.2963/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 18293 37 100.0 34 ..................................... ATTTGATTGAGTATCCAACTCCTCAACAATGGAT 18222 37 100.0 37 ..................................... ACTACAGCTACATTAGTTACCACGGGTACTCTACTAA 18148 37 100.0 40 ..................................... GGCGTAGGATTGGGATTTGCTGTACCTGTCGGCGTAGGAA 18071 37 100.0 33 ..................................... CCAGCTAAAGGATATGCCCCCTGGCAAACGAGA 18001 37 100.0 37 ..................................... CAAGCGATCGCCTCCTAGTGACACAAAAGGAATATAA 17927 37 100.0 35 ..................................... CAGAATATTCTATTTTGAAAACTGAATATCAACGG 17855 37 100.0 34 ..................................... ATCTGCCAAGATATCACTTGAGATGACCTCTAGC 17784 37 100.0 42 ..................................... AAATCGCACTTTAGAAAGTGGTGGGGGTACGGGTCAATCAGA 17705 37 100.0 39 ..................................... AAATCGCACAGTAACGCTCAATGGTACGACTGGGCACTT 17629 37 100.0 33 ..................................... GTGTAGGCGCTAACGCAAGTATTACATTAGCTG 17559 37 100.0 36 ..................................... TCAACTCATGAAGTGTTTTTCTTTCTTTCATGCAAG 17486 37 100.0 35 ..................................... AAAGTGCCGGAGACGCGGCAACCTTTCGGCAAAAT 17414 37 100.0 34 ..................................... TGTCTCCAGTTCCAGGTTTAGCTGGGTGGTTTGG 17343 36 91.9 0 ........................T....-......T | ========== ====== ====== ====== ===================================== ========================================== ================== 14 37 99.4 36 ATTGCAATTCATCAAAATCCCTATCAGGGATTGAAAC # Left flank : TTCGGTTCTCAAGTCTTACGGGCAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTCTCACTCAGTATGCTAAACTGCGATCGCGTTTAGCCAAATTGATTAAACCCGATACCGATAGCGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAAGCAAAAGTCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCCCCTTCTGGCTAGGTTTCTGTATTTCAAATGCGCGGAAGGGTAGGTGTACCAATTCCACGGGTCTAAAAAAGTGCTTCTATCCCAAGTATAGTAAGGCTTTCAACCCATTAGTCACTTAATCCTTATCCGCGCAATCTCTGAAATGCTTATCAAAATACGATTTCAGCCTTTAAATTTTCCTGGCGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAATCGCGCAACCGCACCTTGAAAACTAAATACAGCTTGGCTTTCAGCGTCCCGCT # Right flank : AGTACAACGGCTCCCTGCCCCCTGCCTCCCAATACTTCTCGCTTTGTGCATTTTTAATTCGGAATCGGATTTTGGGAAAAGGGTACTGGGTTTGGGTTAAAGGTTTTTTCTTTCCCCTTCCCCCTTCCCCTTTTCCCCTTAACCGAGAAGTATTGCCCTGCCTCCTATCTCCTTTAATTTAGCTTAACGGTATAGCCAAACACGCAAGAGTGAAAGCAGTTGTTCAGTATCTACGGGTTTGGTGATGTAGTCTGATGCACCCGCTTCAATACACTTTTCGCGATCGCCTTGCATGGCTTTAGCTGTCAGTGCAATAATCGGCAAAGATTTAAATTGCTCGTTTTGGCGGATTAAGCTTGTTGTTTCGTAACCGTCCATTTCTGGCATCATTACATCCATCAAAACGACATCAATATCTGGTGTATTTTCTAACACGTTAATCCCTTCTCTGCCGTTTTCAGCGTATAACACTTGTATTTGATAACGCTCCAGCATACTTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 20982-20522 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOG010000020.1 Nostoc sp. UIC 10630 NODE_53_length_67678_cov_46.273/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 20981 36 100.0 34 .................................... ACGGTAGGCTTTCAGCGATCGCACTCAACGCCGT 20911 36 100.0 35 .................................... TTGATGCCAAATTGAGGGAATTCAAGGAAACATTA 20840 36 100.0 35 .................................... TGATAGTTGAACTTAATACTATTTATCAAGCTCTT 20769 36 100.0 35 .................................... TTTCCAAATTGCCCCCAGAGTTTTTACGTAAAGGG 20698 36 100.0 35 .................................... AATTTATTCAGCAAACCTGGGATTACTATCGGAAG 20627 36 94.4 34 ................................A..A TGGGATATGGGGTAAGGGGAACCCTTGGTACAGT 20557 36 91.7 0 A.............................A....A | ========== ====== ====== ====== ==================================== =================================== ================== 7 36 98.0 35 GTTCTTTAACATTAGATGTCGTCAGACGTTGAGCAG # Left flank : TGTTTAGGTGAAAGTCGGGATCTAGTCAATACTGTTACCCTTTTATCTGAGAAGTATCATGGTGAGTCTTTGTGGTGGTTAGTTACAGATGAAGATGGTTCGCTAACCTTACCCTACTGGGTTGACCATGTTGGGTCTAAGAGAACACGCTGGCAGTGTTATGAGCTTCAAGAGTCCCAAGTATGGCAACCACCGGATTTATCGTGGACTACAATTCAAACTAGTTGAAAAATGAGGATATTTAGATTTTGACAAGCATACCTGCTTGTTGAGCCGACATAAAGAGATAAAAAGTCGGTATTCTCTACTGAATCAGCAATTCAGCGTTTTCATTATGATTAAGGATGCTTGCAATTCCTCAGAAAGTTCCAACAATAAGCCTTCTGGGTGTTGTTAAGCTAGCCTAGCCTATTAAATTTTGCAAATTTAGTGCCTCCTAATGACAGGTGCTTGTAAGATTATCTAGAAGACTTGATGGATTAAGATGTTTAGCCATCGCT # Right flank : GATTTTGCTGTTCGCTGCCATAGCTGATACTTCAAAAACCTCCCTCAACCCTTTTCATGCGAAATTTTTGTGCGGATTTGTTCCCATTGCTCAATCTGCTTCTGTAGTTGCAATTTGCGATCGCCCTCAACTGCGACAAGACCAGTAAACAAACCCTGACCGTTCAACTGATCGCTGTAAATAGCTATCAATTCAGTCAGTGCTTTTTTATGCCTTTCATCTCCTCCTCAGTGAAGGAATTTACATTTAGGCAAATCAGTCGTCTGCCAATTCTCTCCACAAGCTCCGACCTGCTTATTTGAACCTCGCATGACTAGAAGTCACGCGATTCCTGCTTCAACGATCTCTGCCTGAATTACTTCAGGACTTACAAGTTCTCCACAGGCGTTTTTTATAACCTCCGGCGTACCGACGGCGGTTAGTAATCTCAATCCCTCACTCAGAATATTTAAACTTGCGTTTACGTCTCTCAAATTGTGATTATCACAACTGGGACAAGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTTAACATTAGATGTCGTCAGACGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //