Array 1 24965-27445 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTWH01000024.1 Ruminococcus sp. AF25-13 AF25-13.Scaf24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 24965 32 100.0 34 ................................ ATTCTATTTAGATAAAGACATTCCGAAAGAACTT 25031 32 100.0 33 ................................ AATTACATTCTCTAAATGGTATGAACCAAACCC 25096 32 100.0 36 ................................ GAGATTGGGGGAAAGTAATATGGCAAGCAAGACATT 25164 32 100.0 33 ................................ TTATGTGATCTACCGGTCTTCAATCGACTCTCC 25229 32 100.0 33 ................................ GATTCCATGCCACCAAAGGACTGGCAAGAAGCC 25294 32 100.0 34 ................................ AGGTATAGCAAACAAGCCATCGAAAGGTGGCTTT 25360 32 100.0 33 ................................ ATACTGTCTACTTCTGTAATTCCTACTGCATAA 25425 32 100.0 36 ................................ ACAAGTTGTGTAAGGAACGTGATATTGATTGTAAAC 25493 32 100.0 33 ................................ CTTCTCTCATATCCATACTTCAAATTGTCTGCT 25558 32 100.0 34 ................................ ATATCACAAAGATACATTGGAAAAATTAACGATT 25624 32 100.0 35 ................................ AAAAAGCCAATGGAACTTGCAGAACGGTTTGCAGA 25691 32 100.0 32 ................................ AATTGTTCTTTTAAATCCATTTTTCACTCTAC 25755 32 100.0 34 ................................ GGTATTGACTGGTATAAGAAAGCAATGGATGATG 25821 32 100.0 35 ................................ TAAGCTGCCATTTTCTGCTTCCATGCTTCGATTGC 25888 32 100.0 34 ................................ AATTGTTACGGTACTTCCTACTGTAATACCTTTG 25954 32 100.0 34 ................................ ACCCTCATTTGTGTGCCTGCCAATCAGGAACACC 26020 32 100.0 34 ................................ ACCTCCTTACGCTATTGCCGCCGTCTGGATTGTT 26086 32 100.0 34 ................................ GTCAGTTGTCTTTTGAAAGAAAACTGCTGTGATT 26152 32 100.0 33 ................................ ATCGGCATGGCAATTAAGCAGTCTGAGACTATC 26217 32 100.0 35 ................................ AAAAATTCCATGTTCTTCTTCCTTTCTCCGTCATG 26284 32 100.0 35 ................................ ACCCCTTTCAGAATTTCAATGAATGCTTCATAGCT 26351 32 100.0 33 ................................ ACTTGATGCATAACCGACGATATTCTTATAAAC 26416 32 100.0 35 ................................ AGTTATCAGAAATGCAATTACAGATAACAGAAATG 26483 32 100.0 33 ................................ ATAAGAGCGCTTGAAGAAGCCATGCTAAAAATA 26548 32 96.9 34 ...G............................ GTCGAATGGGGAACTACAAAGCAACCACCACAAG 26614 32 100.0 34 ................................ AGCCAGGCTTCCGTTAATGCGCGCTTCCAGTTTT 26680 32 100.0 34 ................................ ATACTTGCGCACGAATACATATACATCCTTTTTG 26746 32 100.0 35 ................................ GATGATACAGAAGAAGAAAGAGAGGAAAATGTCGG 26813 32 100.0 33 ................................ GTACAGCTATCAAAGCCAGTATCTTTGAAAATC 26878 32 100.0 36 ................................ TTTCTCCCTTTGAAAGTCTTACAACTGGTAAAAGTT 26946 32 100.0 34 ................................ GACAATCTCCGGTCCCGCTTCTGCCACGATCGCG 27012 32 100.0 34 ................................ ACCAGTCCTTCGCCGTGTCGGTTACTCTGGTAAG 27078 32 100.0 33 ................................ ATCACTCTGCACCGATGTAGTTCAGGACTTTCT 27143 32 100.0 36 ................................ GCCTGCTGTTCCTTCCACTGTTCTTCGAAATCTATC 27211 32 100.0 36 ................................ GCATTACTCTTGACCGTTGTTGTGTTGGATGCTCCC 27279 32 100.0 35 ................................ AACTGACTGCTTTGCAGCATTTAAGACAAGTGCTG 27346 32 100.0 37 ................................ CTTGAAGAGTACGGCGTTAATCATCGTTGTAGCAATA 27415 31 71.9 0 TGGT..T....-...G...G....A....... | ========== ====== ====== ====== ================================ ===================================== ================== 38 32 99.2 34 GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Left flank : TAGATGAATACCCTCCGTTTTTCTGGAAGTAGGTGGAAAGATGTTAGTTTTGATTACATATGATGTAAATACTCAAACAGCAGCGGGAAGAAAACGATTGAGAAAAGTTGCAAAAGAATGTACTAATTATGGACAGAGAGTACAGAATTCGGTATTTGAATGTCAAATGGATGCAACCAAATGTAGACAAGTAAAAAATATTTTAGAGAACATTATAGATAAAGAGGTAGATAGCCTTAGATTTTATTATCTGGGTGAAAAATATAAAAATAAAGTAGAGCACATTGGTGCTAAGCCTGGTTTTGATGTTAAGGATACGTTGATATTCTAGTGCGAATGATAAGTGCACATAAATTTCCTAGGACATTCGCACCAAAAAAGGAGAAAACTAGGCTTAAAAATATATGTGAAAATGAAAAAAGATATCAACAATAGATATAAAATGTTTATTGCTGATATAATATGCGATTTTAAACAGATTATTTTTGTTTAAAATTGCT # Right flank : TATTCTTGATAGTCTTTCTCAGCTTCGCGTGAAGGAGTCACTATTATACATCATTTAATTTGAATATTAAACTCAATTATCGAAATCTTAGAGGAAATTTTTACATGTGTTCTTAGAAAAAATGAACAACACCTAATAGTCTCCCTGATTTTCATATGGTATTTGAATGTAGAATAAAGTTCCGCAGTAATAATAATAGATACAATTAACAATATAGATGATATCTAGATTTTAACTGTCAAACTCCTGATTTGGCTATAAAAGTATAGATGAAAAGTAATTTGAAATTTCATTTTTGAAAAAAAAATACTATAATTAAGATGGCTTGTCACTCCTATATAAACGCGGTATAATGAATTTATCAATAAGCAGTCTTTATAAAGAACGAAAATAAAGTTAGACCACATAGTACTTTTTGACAAAATCAGGACTGCGGAAAAGGAGGACTCAAATATGAAGATAGACATGCACTGTCACGTGAAAGAGGGGTCCATAGACAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //