Array 1 744183-739396 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMQO01000001.1 Sphingomonas sp. Leaf407 contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 744182 29 100.0 32 ............................. TGTGCGGAGGCAGGAGCCGCCACACAGAGAAC 744121 29 100.0 32 ............................. CCTACTCCAAAGAAAGCGAAGGTCATCCAGAT 744060 29 100.0 32 ............................. GCGCAATTTTCGTCGGAGACTTCGTCGCCGGC 743999 29 100.0 32 ............................. TGGGTTGGCATGAATGGCGGGATTCCTTGCAA 743938 29 100.0 32 ............................. GAGATCAGCCCGTTCGGCACGTCGGTGATGAT 743877 29 100.0 32 ............................. CCTGTTGCATCACCGGCTTTGCGCGCGTGCAG 743816 29 100.0 32 ............................. CGTCAGTTCGGCCGCGAGATCGACGTCGCCGG 743755 29 96.6 32 ............................A TGATCGGCAAGCCGTGGGAAGCCGTCGAGGAT 743694 29 100.0 32 ............................. GCCTGCTCGTGGCCGCGCAGCGGTTCACCGGC 743633 29 100.0 32 ............................. GCGGCCGCGCCATGGTCGGCCGTCGAAGGATC 743572 29 100.0 32 ............................. CCGAGCGCGACGACTTCCGTGGCATCTCCCTC 743511 29 100.0 32 ............................. CGGTCGCCGCATTTTTCGTCGCAAAAACGCTT 743450 29 100.0 32 ............................. ACTGACACCAGCAATTTTCGGCGCATCGCGTC 743389 29 100.0 32 ............................. GTCCTCTAATGACACGATCCGATTCACTATGT 743328 29 100.0 32 ............................. GGGTTGTTGCTGCCCGGCGATTCGGCGTCCGT 743267 29 100.0 32 ............................. ATCAAGGTCGGCGGCCGAGTGCCGGACTTCGG 743206 29 100.0 32 ............................. GTCGCGCTGACCCCCGCCAGCTTCGGCGACCT 743145 29 100.0 32 ............................. GTGGGTGTCGCCAGCATGGCGGCCGACGTGCC 743084 29 100.0 32 ............................. CTTGCGTCGCGGCTGACCAAGCTGATCGAGGC 743023 29 100.0 32 ............................. GGCGGCCTCGACGGATTCGACTGGCTCGCGAT 742962 29 100.0 32 ............................. GTGCAGCAGTCGTGCGCGCCCCAGGCGAAGGC 742901 29 100.0 32 ............................. TGTTCGGTCGCTTTGTCGCCGGCGGCGTTGAC 742840 29 100.0 32 ............................. TCGTAATTCCGAGCGCGACCACGGCGCAGTTG 742779 29 100.0 32 ............................. TTTTCAGGGCCGGTAATGGCTGCAAGCTGCAC 742718 29 100.0 32 ............................. CCCTCCCTCCCGCCCCGGAGGCAGCGCGATGA 742657 29 100.0 32 ............................. GTCGGCCGCGTGCAGGCCGCGTTCAATTGCAC 742596 29 100.0 32 ............................. GCAATCGTGGAAGCCGCCGGTGCTTTCGAGGA 742535 29 100.0 32 ............................. GTCTTTGCGCAACGCGGGCTTATGGCTGGCGT 742474 29 100.0 32 ............................. GGAGTCGAGCGGGGTTCCATCCCAGCTTGGCC 742413 29 100.0 32 ............................. GCGACCAGCACCGCCCCGCCGCCGACACAGGT 742352 29 96.6 32 ............................G CTCGACCAGATGGTCAAACAAATTCAGGAAGA 742291 29 100.0 32 ............................. GCAGCACCGGCGATCAGGCCAAGCCCGTAGCG 742230 29 100.0 32 ............................. CGCGATGTAGGTGGCGTGGCCAACAGCAGCCA 742169 29 100.0 32 ............................. AGGGTCGGCAAGATCGCGCCACTGACCTGTTG 742108 29 100.0 32 ............................. GCGTCACGGCTTGGCTGCGGCCATCTTCCTCG 742047 29 100.0 32 ............................. TTTGCTGAACTGGTGAAACTGGCTCGTTCCAA 741986 29 100.0 32 ............................. GTCACGGCGCGTCCGGTGGCCGCAACGCACCA 741925 29 100.0 32 ............................. GGCGACTATGCGATCGTCGAGGTGCTGGGGCA 741864 29 100.0 32 ............................. CCGGGGATCTCCGCGCGTGCGCGGGCTGACCA 741803 29 96.6 32 ............................G TCGGTGGGCGTCACAGGGCCGGTCGATGGCAA 741742 29 100.0 32 ............................. GGCGGACGGCATCGGCAAATGGGCGGTCGGCA 741681 29 96.6 32 ............................T TTCGATCCCTTCTTTCAGGCGATCTGCCGGCA 741620 29 100.0 32 ............................. CGCGAGCGCGACGACTTTTATCCCACCCATCC 741559 29 96.6 32 ............................G GTAGCACGACCTTGTCAGAGCGCATTGAGATC 741498 29 100.0 32 ............................. AGCAGGGTGTCGCCTTTCGCCACCCCGGCGAG 741437 29 100.0 32 ............................. GGCGCAGTCATCACCTACCCGTGCTTCGGGTA 741376 29 100.0 32 ............................. GCGGCATCGGCATCTTGGAGGTCAAGACTGCC 741315 29 100.0 32 ............................. ACCACCACGCCGCGCATCAGGCGGCGGCCTTC 741254 29 96.6 32 ............................G TGGGTGCGCTCGACGTCGTCGGCGGTTTCGTC 741193 29 100.0 32 ............................. CGGGCCTTCGCGTCGCCGCCGGCCACCCGCGC 741132 29 96.6 32 ............................T CTGCTATGGGAGCGCGACCTCTCGCTGAGCGA 741071 29 96.6 32 ............................T CGACTTGTGGGAAGGCGATGCGACCGCCTTCC 741010 29 100.0 32 ............................. AAGGACAAAGACCCTGCCGAAGCAGATGGGCA 740949 29 100.0 32 ............................. TCACGGGCGGCGGTCATGAAGCGCCTCAGGTC 740888 29 96.6 32 ............................G TTCGCCGTCGGGATCCACGAACGTCGCCACGA 740827 29 100.0 32 ............................. CCGCTCGGTGCGGTCGTGCGCTTCGACACCAG 740766 29 100.0 32 ............................. GGGACGGGGCGTTTGGTGTGGGCCACGAGGTT 740705 29 100.0 32 ............................. CAGCTCGACGTCTGGTCGCGCTTTCCCGATTT 740644 29 100.0 32 ............................. GACGGCGACGTCCGTGCCGCGATCGTCGAGTT 740583 29 100.0 32 ............................. CGCTCGGCGATCATTGCGAAATCGAAGGTTTC 740522 29 100.0 32 ............................. GTACAGCACGCCGGCCACCAGCGTAACCTTGC 740461 29 96.6 32 ............................T TCGCCGCAGCGTCGGCGGCCGTCGCGGTGGCC 740400 29 100.0 32 ............................. CGGCGGATGCGGCCGGCACCTTCGTCGACGGC 740339 29 100.0 32 ............................. CACGGCGCACCATGGCGCGGTCGGCTCACGCA 740278 29 100.0 32 ............................. ATGCCGGGTTCCCCCTCGATAGGGATGCAGCG 740217 29 100.0 32 ............................. AGCAGCGCCAAGCCCCGCAGGATGTTCCCGAT 740156 29 100.0 32 ............................. TGCGACGCACCGCCGCCAATGGCTACCCGGTT 740095 29 100.0 32 ............................. GGGCCAGGACAGCGGCGAATATACTCCCACGT 740034 29 100.0 32 ............................. ACGCCCCTCGCTCGCTATATGCAGGAGACGCA 739973 29 96.6 32 ............................A TCGACGAAGCCGAAAGCGCGCTCGCGCGACTG 739912 29 100.0 32 ............................. TCGCTTCCGAAGCACGTGACGATTATCCATGG 739851 29 100.0 32 ............................. GCACCGGGCAGGCCGGGGCGGAATCCAGCACC 739790 29 100.0 32 ............................. TCGCCGTTTCCTGCCGTTCTATCCGTTCTGAC 739729 29 96.6 32 ....................A........ TTGCATCCTTCGCCCTTCAGTCGGCCATCACC 739668 29 100.0 32 ............................. TATGTCGGGTGCTTCGGAACAGGTCGTAACGG 739607 29 100.0 32 ............................. CTCAACGCGTCGCTCGTCAATGCGCAGGCGGC 739546 29 100.0 32 ............................. GTCATCCGCCCGAGCATCTTGTCGACGTCGGA 739485 29 100.0 32 ............................. CCGCTCGAACCGCTCGGCCGCGCGATCGGCGC 739424 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 79 29 99.5 32 GGCTCCCCCGCATGCGCGGGGATAGACCC # Left flank : AACGTCTGGTGCGCAAACGCTCGGCATTGCTGTTCCGTCAGCGTGCCGTCATCCCCGGCATGATCGACCGGATCAAGACGCTGCTGCTCCCGGGCGAAACGCCGCCGCCGGCGCCCCCGGCGGGCATGGCCTGACGTCGATGCCGCTTACCGTCGTCATCACCCGCGACGTCGAGGATCGCTACCGCGGGTTTCTCGGCTCGGCGATGCTCGAACTGGCCCCCGGCGTCTATGCCCAGCCCCGGATGAGTGCTGGCGTGCGCGGCCGGATCTGGGCCGTGGTCGAGGAATGGCATGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAATCCGCCGCCGCCGGCGGTCTGGGGCTTGCAACGCTGGGCGAACCGCCCAAGGATGTGACGGCGCACGACGGCATCCTCCTGGTCCGCCGCGCGCTCCCCGCCCGAACGGAGGATTGAATGGATCTTTGACATTGTTAGAGAGAACAGCCAGTTGGGTGGCAGA # Right flank : ACCACTCCGGCCGTATTCGCTGCCGAGCTCTAGCAGCAACTGGCGGGGTTAATCTCACCCGTTGCTTCACCTGCACTCCTGGGCGACAACATCGGTCGGCCTCTGGTTGCCACTGAATGAAAGAAAGGGGTTACGTCAGCTTTAACTCGGCGATTATATCGGCCTGCAACGCATTATCAGACATCTCTACCAGACGCTCCTGGCTGTGGTCGATCCAGCGCATCATCGTCGATAGCTCGATACCCAGATTCTCCGCTAGCTCCTGCTGCGTCCGTCTGCTGGTTGCCACCAGCCGTGCCGCTTCGTGCTTATTCCTTCATGAACCGTCGCTGCTTCGTCATCGAGTTCGCCTTTTGCTTCAAGGTAACTCTCCATTTTCCGGGGGCACGTTCGTTCCGTTGCGTGCAACGGCAAGAACGCCATCAGGACGGCAAGATCGACCAGTCATCCGTTCCATGATCGTACCACAGCATCAGCACCTTGTTACTTTCGGCGTAGAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCATGCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //