Array 1 195400-198551 **** Predicted by CRISPRDetect 2.4 *** >NZ_LREM01000014.1 Acinetobacter baumannii strain AB4991 LV55_contig000014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 195400 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 195460 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 195520 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 195580 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 195640 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 195700 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 195760 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 195820 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 195880 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 195940 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 196000 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 196060 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 196120 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 196180 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 196240 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 196300 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 196360 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 196420 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 196480 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 196540 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 196600 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 196660 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 196720 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 196780 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 196840 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 196900 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 196960 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 197020 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 197080 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 197140 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 197200 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 197260 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 197320 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 197380 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 197440 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 197500 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 197561 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 197621 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 197681 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 197741 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 197801 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 197861 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 197921 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 197981 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 198042 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 198102 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 198162 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 198222 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 198282 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 198342 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 198402 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 198462 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 198522 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //