Array 1 110133-109935 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFPK01000062.1 Ochrovirga pacifica strain S85 contig00067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 110132 46 100.0 30 .............................................. ACAGATGCAGTAGTGTTTAAAGGTGTTAAA 110056 46 100.0 30 .............................................. ATACGGACACGTATACGTAGGTGACTACGT 109980 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 3 46 100.0 30 GTTGTGAATTGATTTCAAATTGTATTTTTATGTGAGGAATCACAAG # Left flank : GAAGTTTTGCGTTTTTGTAAATGACAACG # Right flank : GTCAATCCCCAAAACTCTAGAGAAATAGAGGGTTGGGGATTATTTTTTTGAATGAGAAAAATAAGAGCAAAACTTTATTTTTTAGTATTCTAAGGTTTTGTTTTTTAATTCTAAATCACTGAATTTATAATGAATGCTTACTTTTCGACTTCGCTCGAAGACCTTATTTGTTTTAAAACAATTCTAATTGTTGTGTGGTATTAGGTAAATCGGTCTGTTTTTTTCCATGAAACAATTCCATATTTCCAAATTGTTTGTCGGTAACACATAAAATACCAATTTTACCATGTTTAGGCAAGGCATTTTTAACACGTTTGATATGCACATTGGCATTTTCTCTACTTGGGCAATTGCGTAGATAAATGGAAAATTGAAACATATCAAATCCATCTTTAATCAACTCTTTACGAAACAAATTGGCAGCTCTGCGTTCTACTTTGGTTTCGGTAGGCAAATCAAAAAACACCAATACCCACATAATTCTATAAGCGTTAAATCTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGATTTCAAATTGTATTTTTATGTGAGGAATCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 25364-25543 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFPK01000069.1 Ochrovirga pacifica strain S85 contig00075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 25364 28 100.0 48 ............................ CGAGTGTTGCTCCTTCAAATGGATTAGCATGTTGTGAATTGATTTCAA 25440 28 100.0 48 ............................ TCCATTTATGAGTAAAATAGGTTTGCCCGGGTTGTGAATTGATTTCAA 25516 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================================ ================== 3 28 100.0 48 ATTGTATTTTTATGTGAGGAATCACAAG # Left flank : TTATCCGCTTGTCTGTCTTGCGGATTAACTTTTGCTAAAGATTTTAGCTCTATCATAATAAATAAATTTATGACCACCCCTCTGGTGGTCTGTTACTATCACTAAGATACGACTAATTGTTTTTTGTTAATCTATTAGTTCTAAACAGTATTCACACTTATGTTGATAACTTATGTCATTTTTTTTTTGTTAAGTTGCTGTTTTCTAGAGGTTTGGTTTTTTTGATTGTGTTATAAATGTCAATAACTTCTTGATATTTAAGTGAAAAAAAGGGAGTTTTTATACAAGAATTTGTATATCCTTAAAGTTCAAAAATTAGAAATAAGTGTGTTTTTTTAGTTAAAAAATACCGAAAAACGTCAAGTTTGTTAATTTTTGCTCTCAAAACTGTAAAAAAATAAAACGAGAAATGTTTTAACAAACAAAGCAAGCAGCTAATTAGAAACTTCTTTGTGTATAGTTTATACATATTTAAATTTGATGTTTTTTAATTTGTTATT # Right flank : TGTACTCCAGTACTTTCTGCTTTGCTCCCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATTTTTATGTGAGGAATCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //