Array 1 96344-97419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABPUC010000010.1 Campylobacter concisus isolate 2010-112708, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 96344 30 100.0 37 .............................. ACATGCTTGAGGCAAGACTAGTGTTTTCCGTAAAAGA 96411 30 100.0 36 .............................. GAAGGAGCTTGCTAAAAATGGCTGAAACTACACATA 96477 30 100.0 34 .............................. ATATAGATATTGAATATTTGCTTAACGAGCATAA 96541 30 100.0 33 .............................. TTATAGATGGCGGTGTAGTTTCTAGCAATACGA 96604 30 100.0 35 .............................. AGCACCAAATACGCCAACGTAAGTTTTAAAGACGT 96669 30 100.0 37 .............................. AGAAAAGAGTATTTAAATCAAGTCCTAGCTGATGGCG 96736 30 100.0 37 .............................. TTTGATTTAACTCTATATTTAAACCTGCTAAAGTCAA 96803 30 100.0 34 .............................. TGATGTTTATAGTGTTTCAAATAATCCTAATCAT 96867 30 100.0 35 .............................. GTACGATACGAAACTGAGCATCGCTTTGCAAAAAT 96932 30 100.0 36 .............................. TTTTGAGGACTTAATGGACTACGAGGCGAGCGAATT 96998 30 100.0 36 .............................. CTAGATTTTCTAAGCTATCGGTTATTTTTTGCCCCA 97064 30 100.0 35 .............................. AAACATATCATGTCCATGCTCTCGTCATCTTTTGC 97129 30 100.0 34 .............................. AATTTACCTGTATCACTTTTTAAACCTTCATAAT 97193 30 100.0 35 .............................. GCTATATTCTTTAAGACTATCTTGATTGTTATATT 97258 30 100.0 35 .............................. TACGAATATTAATGAGTTTAAATTTGAGCTATGCG 97323 30 100.0 37 .............................. CCTGAAAGCGTGCAGACTGGCACTTTTATGTTTTTAG 97390 30 90.0 0 ..............T..........T...T | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 99.4 35 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGTTTTTTGCACGAGCTAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTTCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGTGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAACAAACAAGCTCAAAAAGTGCATCTGTGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAATATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : TCTTAAAAAAAGATATCCTTAAGCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATAAGTATTGATATTTTAAAATATTTCTAAAGGAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAACTATGTAAGGTATGATAGCTGCGTGGCGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGGTATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAGCAATACTTTAAAAGTGAAGTATCCTTGTAATCTATAAAATCAATTTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //