Array 1 2685396-2681257 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABIZ01000001.1 Verrucomicrobium spinosum DSM 4136 = JCM 18804 strain DSM 4136 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2685395 36 100.0 37 .................................... AATAGCTTCGTGCCAGTCGATCTTGCCGCCGGGTATG 2685322 36 100.0 38 .................................... GAAACTCAAGCCGCCATAGTAGCCCTCTCCCATCAGGG 2685248 36 100.0 38 .................................... TCGAGCTCCTCGGGGTAATCGAGGGTCGTCTTCATGAT 2685174 36 100.0 38 .................................... TCGCGCTCAGCCAGGTGGGTCAAGTATTCCGCCTGAGC 2685100 36 100.0 38 .................................... GATGCGGTCGATCACCGTGCCATATGGAGTGCCCATGT 2685026 36 100.0 39 .................................... TCAGGCACTGGGCGAAATTCGTGAACGTGGCGCTTGCGG 2684951 36 100.0 38 .................................... GAGTGTGCCGTGCAAAACTTACTGCTCACTGGCGCGGA 2684877 36 100.0 40 .................................... TCTTCCCGACCGACGGCCTCGCCGCCACGATCACCAGGTC 2684801 36 100.0 39 .................................... TTGGCCTTGTGGCTCGACCGCTTTGCGTGGCCAAGGTTG 2684726 36 100.0 36 .................................... GCGGGTGGTGACTCCATGCCAAGAGTTGCCAGAAAT 2684654 36 100.0 37 .................................... ACTTCCCTGGTAGTAGGGATCGGTGATCTTGACCTTC 2684581 36 100.0 37 .................................... GCTGGGGCTGCTCACAAGTTGGGCCTGACCAAGGCGC 2684508 36 100.0 37 .................................... CGTGCGGTCGGTACTCGCCGCCTAGGTAAAGGCCAAG 2684435 36 100.0 36 .................................... GCGACCCGCGTCGATGGTGACTTTCGAAGGACCTTG 2684363 36 100.0 37 .................................... GCTGTGCGTGGCGGGGAACGTGTTTTGGAGAATGCCT 2684290 36 100.0 37 .................................... ACCGACGATGAGGTGATGTCCTATCTGCCGAGCGCCT 2684217 36 100.0 37 .................................... ACGCCCGGGGCAAGAGGTGGCGTCGTGAATCGATATC 2684144 36 100.0 37 .................................... CCGCCTTCGCCGGTCAAGTCCTTGAAGGCTTGCTCCA 2684071 36 100.0 35 .................................... GCGGCGGCGACCAAGGCGACGGCGTCGCGAGGATC 2684000 36 100.0 37 .................................... CGTCTCCACGGAGTGGGTTCAAGGAAAGTTCAAGGAG 2683927 36 100.0 38 .................................... TTTAGGATGCGGCATCCGGCCTGGTATTTCTCCATGCC 2683853 36 100.0 38 .................................... CGCCCGTCGGGGCTGTGTTCACGCTGGCCCTCACGGCA 2683779 36 100.0 40 .................................... AATGCGATCTCAACATCATACACCGCGTTGAGGTCGGCGG 2683703 36 100.0 38 .................................... AGGTCGGTGGTGAAGTCTGACGACCACCGTCTCATTGA 2683629 36 100.0 37 .................................... CTCAAATGGAACAAGGCTGGCGGGAAGGTTCTCGCTG 2683556 36 100.0 36 .................................... GGCTTGCCCGCGTATCGAGCCTCCGCCGTCTCGATC 2683484 36 100.0 39 .................................... AGAGATCATTTCGTGCTGCCAAACCCGCCATTCGGGTGT 2683409 36 100.0 37 .................................... GGCCCGACGCTTGGCAAAGGCGATATCGACGAAGATC 2683336 36 100.0 39 .................................... GCGGTTCAACCAGGGCGGTATCAAGGCGGAGGGCTCATT 2683261 36 100.0 36 .................................... ACGAAGCTGAGGTCGATGAACTTGCCGCCCCACTCG 2683189 36 100.0 36 .................................... CAGAGGCACGATGTTGTTGGGGGCATAGTACATATC 2683117 36 100.0 36 .................................... GCAAACTTTGCAAATTTTGTCACTGCCACCCGATCA 2683045 36 100.0 37 .................................... GACTGTATTTAGTGGCTTCTTGCGTATTACCCTTCCA 2682972 36 100.0 36 .................................... GATGCGATGGCGATCCATGACCTGCTGGTGAACCAC 2682900 36 100.0 37 .................................... AAGTTCAGGGCTAAGCGCAAAGAACCCTCCGCCCGTT 2682827 36 100.0 36 .................................... TCCGGTGCCGGCACCTGCCATGGCCCCTTCGAGTGA 2682755 36 100.0 38 .................................... CATGGCAGGGGTTCGGTGTGTTTCAGGTCGTGTTCAGT 2682681 36 100.0 35 .................................... GTTCCCAAGGAAGTAGGTTTTGTTTTTGATGAGCG 2682610 36 100.0 37 .................................... AGCGTCAAGGTCCGCAGCGAACCAGCCAACGGTTCTT 2682537 36 100.0 38 .................................... GGAACGAAGCGGGACCAGTACCGGACGACGTCGCACAC 2682463 36 100.0 40 .................................... AGAGCGGCTCCCTGGTGGTTCCGGGAATCAACATGAAGGA 2682387 36 100.0 37 .................................... GGTTTTCCTGGACGGCTCCCCCGGAGTTGCAGGCGGA 2682314 36 100.0 38 .................................... ACAGAACCCACGGACCGACTCCCCATCCATATCACTGG 2682240 36 100.0 37 .................................... TCGGCCTGCTCTGGGGTCATCTTGAGGGCAGTCAGCA 2682167 36 100.0 37 .................................... TCAGCGCGAGACTGCAATGCACCCGACTTGTCCAGCT 2682094 36 100.0 37 .................................... AGCGCTGGCGGCTGGGAGTGGAAAGGCGAGTTCGTCG 2682021 36 100.0 38 .................................... CATGCCGACCAGGGCGAGGCGCAGACCGTGGCCGTCGT 2681947 36 100.0 38 .................................... CAGACACCGCCTCATCCGGCCCCGTAGCCTCCAGATCC 2681873 36 100.0 37 .................................... TTGATGTTGGAGGTCCGCAGACGGATGCCCCTTACCC 2681800 36 100.0 37 .................................... GGATTGAGGAGCTGGCTGTTTACCAGGCTGTCTACGG 2681727 36 100.0 36 .................................... CAGGCCAGTGGCGATGTCCGCAGGTGTGGCGTCGTC 2681655 36 100.0 38 .................................... GTTTTGCAGTGACCGGATCTCAAAGGACTTAATCGTGC 2681581 36 100.0 38 .................................... CTCCGCGATGGTGAGTCGTTTGGGGCCGCACCCGTCAA 2681507 36 100.0 37 .................................... CTCGCAGAAGCAGTCGAAAAAAGTTATCTCATAGACC 2681434 36 100.0 35 .................................... GTACGGAAGGAGATCACGTCTCCTTCTTGAAGATA 2681363 36 100.0 35 .................................... CGCCTGGAGGTGGCGATGACCAAGCCGGACAACAT 2681292 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 57 36 100.0 37 CCAGCAGCAGTCAGTAAGCCGAAAGGCAATGGCGAC # Left flank : TCCATCGTGACACCGTTCGTGACGTTCCGCCCCGGGTGGGGTGAGGCTTCCATGGAGATCCTGGGACATCCTCACGTTCGCCGCTCGGCCTCCCACGAGGAGAATGTCTCATGTCCCGTCGCGTCCGACACATTCATGCCCGCCGTGGAGAACACGTCGTCGTCCATCGCCCCCACAGCAGCGGAGGCGGTGGCGACGCCGGATGCGGGATCGCCATCCTGCTCGTCATCGCCTTCTTCCTCCTGCGGAGTTGCGGCTGATGGCAGCGAGGGGGTGGAGGTGGAGGGGGCCGCCCCCCCCCTGCCCAGGCAAACCCCTGCGATCTGCCGACATCTGCGAGCGCTCACGTGCCGCCCAAAGTGCCGGGGGCGCTCGCGTGCTGAGACTGTGGGAGTTAGCCCAAATCAAGCGCTCCCGCAGTGTCTCTCCACATGGAGTTTGCCTCCCCTCTCGCAAACTGCTACCGGAACCATTGACACTCAAGCTCCTAGGCGTTACCT # Right flank : AACACGACACTCGACACATTGCCAGAGCGGTTGGCATCACCAGCAGCAGTCAATAAGCGAGCCTCCCTGAATGACCCGGGCCTACAGCCCTCAATATCTAGAACCAACGCCAACCTTGGGCGTTGGCCATGGCGGCCATCACGCCGGGCTTTCAGCCCCCCAGCTCGTTTGACGAAGCGAGGTCATCAGCCTCGCCAGCTTTTACCTGATGGAATGGGGATTTAGCCCGCCGGAATGACATTGGCAGAACCACGCCTTTTCCGAAGGATGTGCAGACGGAGGGCAGCATGCACTGCCACTCCGTTCCCTACCCACCAAGGACGCCCGACAACTCTACTCCGCGTAGTTCGCCTTCTTGGAGAGGAAGTACTCTAGGCTGTCCACCAACGCTTCCCAGCTGGCGTCGATGATGTTGGTGCTCACGCCGACGGTGCCCCAGTGGTTCACACCATCGGTGCTCTCGATCAGCACGCGGGTCTTGGCAGCGGTGCCCGTGCGGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCAGCAGTCAGTAAGCCGAAAGGCAATGGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 5677598-5675572 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABIZ01000001.1 Verrucomicrobium spinosum DSM 4136 = JCM 18804 strain DSM 4136 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 5677597 36 100.0 40 .................................... TCTGCGGCATCCGCAACGGAGGTAGGCAGCACCTGAAGCT 5677521 36 100.0 38 .................................... CACCCTCGACGCATACCCACGCTCAGGGCGAAATCACG 5677447 36 100.0 37 .................................... AATGGGTGCGGAGATGTTGGAGACGTTCGTGAGTTTT 5677374 36 100.0 35 .................................... CGAGGTTAGGAACCGGACATACCTTGCCATTATCA 5677303 36 100.0 38 .................................... GCGCCATGGAGCTAAGGGCAAAAGTCGATCCGGCGCTG 5677229 36 100.0 38 .................................... ACGGCTTGTTATTTCCTTCTCCCCCAGCGCCGCGGCAT 5677155 36 100.0 37 .................................... TGGGCGCTGTGTGGTGGAGTGAGGGGATGATCCTCGA 5677082 36 100.0 37 .................................... CTGCACCTAGGGCCCACCAGTGGGGCGCAGGTGGGAG 5677009 36 100.0 37 .................................... TGACGGTAGCCATAGAAGGGAAGGAAAGTTATGGGTT 5676936 36 100.0 38 .................................... TGCTCCATGGCAAGTTGAGCATTGTCAACTTGTTCCGT 5676862 36 100.0 37 .................................... GTTGCCGTGTGCAAGGTCAAGCGCCAGGGGCACCCGG 5676789 36 100.0 38 .................................... ATTCCGTTCACGGGCACCGCTTGACCGGCGCGTTGCCT 5676715 36 100.0 40 .................................... GTTGTGACATCTCCGAAGTTCAGGGAGAGTGCTCGTGCTC 5676639 36 100.0 40 .................................... TCCACTTTCACGGGCTTGGCAGGTTTGGCCGGGGGAGCCG 5676563 36 100.0 38 .................................... GCAATGGCGAGCGCTGCCTCTTTAGCGTCCTTTAGGTC 5676489 36 100.0 40 .................................... GCGGTTGATCGCGGCCCCGGATACCTGACGCTCCAGCAAG 5676413 36 100.0 37 .................................... GCTCCTTAGTCGGACCTTCTGCAACTGCTGGAGCTGA 5676340 36 100.0 36 .................................... CAAAGAGCAGCTCACAGACGAGTACACGGAAGAGGA 5676268 36 100.0 38 .................................... CTGCTCTGGCAGGGTCGGAAAATACAAGTCCACATATC 5676194 36 100.0 37 .................................... TTGACACAGAAACCACGACCGCCAGCTAACGGCAAGG 5676121 36 100.0 37 .................................... GATTATGACCGCGGCATTGTGACCGTTCACAAAATCG 5676048 36 100.0 39 .................................... ATGATTCCGTTGGGGCGGGATTTTGGGACGAAAACGGTT 5675973 36 100.0 39 .................................... CTGGAACCATCAGACGGGGCCAAGGATCGGTTCACCAAC 5675898 36 100.0 37 .................................... TTGTCCACTCTGAGCGACAGCGTTAACAAGATCTATC 5675825 36 100.0 38 .................................... TGTTCAAAGCAGTTTGCGGTATAGTAATCAATATGGGA 5675751 36 100.0 36 .................................... TTGAGAATAGGAGATGCAATGGAAAAACCCTTATTG 5675679 36 100.0 35 .................................... ACGGGAAAAGTCGGATTTCTTGAGCACACACACGG 5675608 36 100.0 0 .................................... | T [5675574] ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 100.0 38 GTCTCCGCACTCGAAAGGGTGCGGCTTCGTTGAAGC # Left flank : AAGCGGTTGAGAAAGGTGTTTAAGGTCTGCAAAAACCATGGTACTCATTTGCAGTACTCGGTGTTCGAGTGTGATCTGAACCCGAGAGAGAGAACCCGGCTGGAGCGCGAACTGAGGGATGTGATCAAACACGATGAGGACCAGGTTTTGTTTGTCTCTCTGGGCCCCAGTGAGGGCCGGGGAGACCGTGTCATTGCGTCCGTGGGGCTGCCCTACGCACGCTTTGACGCCCCCTGCTATGTGGTGTGAAGCACCGCAGGGGAAAGGGGAACAGGGAAGGAGGCGATCTTTGACATTCACCAAAACATTCAGAGCAGGAGCGCCCGCGCTGACTCGCGAGCGGTCAGGTGCTGCGCGCCAACCGGGAGGCGCTCGCGCGTTGTGGATGAGGGGTTTGCAGCAGAAAAGCGGCGAGGGTTCGCCGATTCCCGGTTTGATTCAGGGTGCCGCTCGCAGATGAGCTTCTTGCAATTTGATGCTGAATGGCCTACAGAGGTGGC # Right flank : GAGTGAGGCAAGCGGTGCGCTTGCCCTACAGCGTCAATAACCGATTAAAATCGGAACAGTGATCCAGGGAAGTTGAGATGCCGGAGGCGACGTCGCTGGCATCCGCTCCGGGATGCAATACTGAATCTGATGTTCCGGAGGTATCAGTCGCTACGCTCCTTCAACCGTCCGTCTAATGGCTTTGATGCCTCCGGCATCGGGCAAACCGGGCTGGGACACCATCAGATCATCAAAGTCGACAAGCCAACTTCCCGATGAGGTGGGGTCAGGGGCGAGGAGGATGACCTTGTACCTGTTGGCCACTTCCTCGCTCCCCAGCCATCTACCATCTGGGTTGTAGGGCGACCGCTCCGGTTGCCGGGTCTGGGTTGGCTCGCGGCAAGCGGAGCGCTTGCCCTACAGCGTCAGGGGTGGGTTGGGTGAGCGAAGGTCTCTGGGTGCTCTGTTCCCGACCCCGGATCCAACCACCCTGGGTTGTAGGGTGACCGCCTCGGTTGCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCACTCGAAAGGGTGCGGCTTCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //