Array 1 5036-6733 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVKR010000002.1 Bacillus carboniphilus strain SaN35-3 SaN35-3_ctg002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 5036 32 100.0 35 ................................ AGTACACAGGCGATTATGATTATCTAACAATGCCA 5103 32 100.0 35 ................................ AAAAGTTTGGAATGTCATGCTATCAAACATGAATT 5170 32 100.0 38 ................................ ATACGATACACTGTAATCCCCAACATCTTCGTAGTGAC 5240 32 100.0 33 ................................ AAGAAAACGCGACGATCTCGCAGAAAGTATTAG 5305 32 100.0 35 ................................ TCCCGTTTTAGGGGTTCTCAACAAAAATGACGTTG 5372 32 100.0 33 ................................ TTTAGCAGTTTCTCCGTCCGATCCATTAACAGC 5437 32 100.0 36 ................................ AAGACAAATCACTTTATATTGGGGTTTTGCAATGGG 5505 32 100.0 35 ................................ TTTATCAATACTAGTAGATCCTGTTCCTGGTGCTT 5572 32 100.0 33 ................................ TCGTATCTCTTCATCTTTTCATCCATCACCTTT 5637 32 100.0 34 ................................ CCCACAGACAACGAGACAAATCAAAGACACCTAG 5703 32 100.0 34 ................................ GTAAAGGTGATACGTTTTGGGACCTGTCAAAAGA 5769 32 100.0 36 ................................ AGTAGGGTCAAAGTTTAATATTAAAGTCGTTAACAG 5837 32 100.0 35 ................................ ATGGATTCCACCATTGATATTAAAAAGCTTCGTGA 5904 32 100.0 33 ................................ AACGCTCCAATGGAATTAAGAGAAGAGATCACG 5969 32 100.0 34 ................................ GCTCTGGGGCATCGCAAAAGATCACAACACATCT 6035 32 100.0 34 ................................ TATGATATCAAGCTGTTAGAAAAGATGTTTAAGG 6101 32 100.0 35 ................................ TAGAAGTAGAGTAGGTGTTTATAATGGAAGCCGAA 6168 32 100.0 34 ................................ TGTTACCAAAGATATTATTGCCGACCTTGCCATT 6234 32 100.0 34 ................................ GCATATGACAAATTGTAAAATCATGTCCAACATG 6300 32 100.0 37 ................................ ATATAATGGCGCATTACGTGTTTAAAGAATCCTGCAC 6369 32 100.0 35 ................................ AAAACTAAAGAGCGTCACTTGTTACAAGCGAAAAT 6436 32 100.0 35 ................................ AAAAGTTAAATGATGAGTTGATCCTACAACTTAGA 6503 32 100.0 35 ................................ AACAAATCTAACATCATTTTTCATTTCACACTCCT 6570 32 100.0 35 ................................ TAATCGTGTTGACTGACAATAAAGATGTTTAATTA 6637 32 96.9 33 ...............................A TTACTGGCAAGTTTCATCATTTTCAGTAGTAAC 6702 32 96.9 0 ...............A................ | ========== ====== ====== ====== ================================ ====================================== ================== 26 32 99.8 35 GTCGCACTCTTTATGGGTGCGTGGATTGAAAT # Left flank : GATATAGAAGAGTACCCACCATTTTTGTGGAAGTAGGTGGAAGGTGTTGTTAGTGTTAATAACTTATGATGTAAGTACAACAGATGCTAAGGGTAGAAAACGGTTGAGAAAAGTAGCTAAGCTATGTCAAGATCATGGACAAAGAGTTCAAAACTCCGTTTTTGAATGTGTTCTTAATAGTGCCGAGTTTGCAGAATTAAAACATAATTTGGAGAAGACGATTGATAAGTCAGAAGATAGTTTGCGTTTTTATCGATTAGGAAATAATTACAAGTCAAAGATTGACCATATAGGCGCAAAGGAGTCGTTTTTTATAGAAGATCCACTAATTCTATAGCTAAGTGCGAGTGTATAGTGATCATAAAATCGTAGGTTGTTTCGCACGGTCTCTACAGGATTTGTTACAAGAATTGTTATTATATTTAATGAATTTGTAATATAATAGTAATAGAAAGAGTGATAATTGTGGTGAAAGCACTACTTTATAGCACTTTTTCGCT # Right flank : TAACCTCCATAAATAATATCCAAAATTTCTCTAGTAGATATTATCATTTTAACCTAAAATTCATTTCTACAAATAAACATTTTTAGTTATATGTTAGTATATACCTAGAGATGAGGTGATAAAAAGTGAATAGAAAAATAGACGATCTTAAAGAACGAATTAGTAAGTTGGAAAATGAACTTTCCGAAGTTAAACAAGAACTGAATTACATAAACGAAGGTAATGCAATTGAAGATCAAGCCACAAAAGCAATGCAACAAGAAAGAGGAGTGACTCAAAAACAAACAATTCAGGTTCCTTCTGAAAATCAAATTAAATCAAAGGATGGAAAGCAATCACAACCTAACATGGATCAAATTGTTGCAAAGTGGTTACCACGAGTATTTATTTTTGTATTTATTTTAGGAATTATATGGGCATTTATAGCTGCAGCAGAAAGAGGCTGGATTAATCCGATTGTTAGGGTCTTTTTTGGGTTTGCTTTATCTGGTGTACTCTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //