Array 1 69202-68868 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOO01000007.1 Acetobacter sp. DmW_125124 NODE_7_length_88638_cov_11.947946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69201 29 100.0 32 ............................. CCTTGGTGGCGCCCTCAATATGGGGATGGGCA 69140 29 100.0 32 ............................. ATACCTACAGCCTGACAGATCTGCTGCCTGAT 69079 29 100.0 32 ............................. GCGTGAGACAGCGCGTGGTGGCTGAGGAGGCT 69018 29 100.0 32 ............................. GAACACCCGCGCAGGAGAGAAGGCGTGAAACA 68957 29 100.0 32 ............................. GGAACCACATGGGAACCGCAGGAACCTCGCTA 68896 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCCGGTGAAGCGGGGCCGCCACCAGTGCAGAAAGAGGCGATGCCCGTTGCGTTTGCTGATCCGAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCCCCGCGTTTACGCGGGCGGCTGGCTGTATGGCTTCTGGAAGTGCGGGCTGGTGTTTATATTGGCAGCTACGGGCGGCGTGTGCGGGAAATGATATGGGGGCAGGTCTGCGCCTATATTGAAGATGGCAATGCTGTGATCGCTTGGGCGGCTCCAAATGACGCCGGTTTTGAATTTGATACTTGTGGGGAGAACCGTCGGGTGCCGGTAGATCTGGATGGTTTGCGGTTAGTTGCTTTTGGTCGTGAAGCAGCTCTTCCGATGCAACCAGGCCCTGCTGTAATGACCCTTCCAAGACGGCGTGGAAGAGGGTAAAAAACAGTCATTCGTCTGGTAGATTCTTTGATAGTAAAATAATGTTTTAAAATCAATTGGTTCCACAAAGA # Right flank : GTGAAACCCTTACTCTAGTGGAAAAGGCATGGGGGTTACCGAGCAAGTGGGTAATCGGTATAGCCTTCTGCCCCCTGTGTGTACCAGGTTTGGATATCATCCTTATTCAGGGGAAGGTTATCTTCCAGACGGTGCACCAGATCCGGATTAGCTAAAAAAGGTCGGCCAAATGCAATGGCATCGGCAATACCGGTTGCGACCGTTTCAATCGCTTCGTCCCGTGTGTAATCCTGATTCAGAACCAATGGTTTTGTAAAAACTTTGCGGATCGGAGCATGCAGCTTCGGCTGATCGGTCTTGCCAAATGTGCCATGAGGGCCGGGCTCGCGCAGTTCGAGAAATGCAATATCGAGATCGTTCAGAAGCTTTGCGGCGGGTACGAAAACCTGATCGGGATGGGTGTCGATGCAGCCTTGTGTATTGCCATTTGGTGAAAGCCTGACAGATGTTCTGTCCGCGCCAATCGTGGCGATTACTCGTTTCGTGACTTCATGCAGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23740-24439 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOO01000082.1 Acetobacter sp. DmW_125124 NODE_83_length_26090_cov_11.894443, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23740 29 100.0 32 ............................. GATCTCGTAGGTTGGCGAGAGAGGCCTTGGTG 23801 29 100.0 32 ............................. GGTATCCCGCAAATGGCAGCCGGATTTCAGGA 23862 29 100.0 32 ............................. GTCAGCGTGGCGCAGGAAGTTGACCAGGCACA 23923 29 100.0 32 ............................. GAATGCGCCATCAAAGCAGGCGTGCAGGCAAA 23984 29 100.0 32 ............................. GCCAAGGCGCTTTCAACTCTGGATGGTGGCAC 24045 29 100.0 32 ............................. CTGGCAGCCAGATCGCACCACAGCACAAATTG 24106 29 100.0 32 ............................. AGGAACGCGCTGGGAACAAATCCGCATTGCTG 24167 29 100.0 32 ............................. GCTGAGGCGCGTGGCAACGCTGTCATCATCAC 24228 29 96.6 32 ............................T TCAAATACCTTATATGATCTGAATTTATCTAT 24289 29 100.0 32 ............................. AAAATCTACACCAACGGAGACGCGCTGCAACT 24350 29 100.0 32 ............................. ATAGGCAGGAACACGAAACGGCGCACGCCACG 24411 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CACTTATACGAGTTGCAAAGCCGGGAGGGTACATTTGGCTTTCATCTGGGGCGTAAAGCACGTCCACTTTGCCGGTATTGCGTAGCAGGCCAGCATCATCTTCCAGCCCGCGCGGGTAATGCTGGAAATCATTGGTGTTGTTGAATTGGATAGGATTTACAAAAATGGACACAATTCGACGGGAGGCTTTGCCATCCAGCGCATTTATGAGTGAGATATGGCCTGCATGAAGTGCGCCCATGGTCGGCACAAAGCCAATAGTCTGGCCATCTTTCCGCCAACTGGTGCTGAGTGCTGCCAGTTCTGCTTTGGTTTTTACAATCTGCATGATGAATCCTGAACGCCAGTAATTTAGTCAGCCGGAATAAGTGTTCCAAACTGCAAAGTGCTGCAATGTATCCATGAATGTGCCACTATTCCAGAAGTGGCTGGGCCCTTTTATGGTTGGTGGATTCTTTGACAGTAAAATAATGCTATGGAATCAAATGGTTCCACAAAGA # Right flank : GGCTGACTCCGTAAATAAGGTCGTGCTCGTTGGGTGTTCCCCACACGCGTGGTGACTAGCTTGAAACAAAACTTTAGGTAGAGTGAAAAGCTTCCAGTCTGTGCTATAAAGACGCATGTCTTACGCTGATTTTGTTCATCTTCGTGTTCATTCTGCCTATTCGCTTAGCCAGGGGGCCATTCGTGTGCCCGATATTGTGGGGCTGGCGAAGGAAATGCACATGCCTGCTGTGGGTATTGCAGATTCAGGCAATCTGTTCGGGGCGTTGGAATTTTCTCAGTATTGTACCAAAAGCGGTATTCAGCCTATTATTGGCAGCCAGATCGGCCTGCCTGCGCGTAATGACAAACCCGGCGCCCCCGCCGAGCCTGTAGTGCTTCTGGCACAGAATGAAGCAGGGTTGGCGAATCTCCAGTTTCTTTCTTCAGCCGGGTTCCAAAATTCAGATCCGGCAGACCCTTTTGTTTCTCTGGATTTGCTATGTGAGAAAGCAGAGGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //