Array 1 1431860-1429168 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020873.1 Prosthecochloris sp. HL-130-GSB chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1431859 32 100.0 34 ................................ AAAATCTCACTATACGGCACACCGTACGTTGCCG 1431793 32 100.0 36 ................................ TGGATTTTTAGCGCATTGGCGCGGAAGGTTATGCAC 1431725 32 100.0 34 ................................ TGCGCGAGGATGTGGCCCAGTGGAACGCCTGGCG 1431659 32 100.0 35 ................................ TGTGGTCATTGTTGCCTCCTTGGTTGTTGTTGGTT 1431592 32 100.0 34 ................................ TGGCGGTGAGATGCGACAAAAACAAAACCAAACC 1431526 32 100.0 33 ................................ TTGCGGCTGGTGGATCTGGAGCTTCAACACCTG 1431461 32 100.0 36 ................................ ATGGGAGAGCAACGTAATCCGGGTGACAGCACGGAT 1431393 32 100.0 35 ................................ ACGGAGCTGATTAATCGTAGCTGCGGTTGCATCAG 1431326 32 100.0 34 ................................ GCGGGCAATCTGCAAATTTGCTGCGTTAGCAGAC 1431260 32 100.0 35 ................................ CCAGATGGCCCTAGATAAGGATCAAGTCGAGTAAG 1431193 32 100.0 34 ................................ TAAAGACACAATTGGCAGGCGCAAAGAACATTGA 1431127 32 100.0 35 ................................ CAAATAAGGTTATACGCGCGATGAAAAAGCGCTGA 1431060 32 100.0 33 ................................ GACGAGGATCATATAATAGTAGTGGTGGAAGTC 1430995 32 100.0 37 ................................ AAGAGCGCATGTCTAATACTGCTCATCAAAGGCAAGT 1430926 32 100.0 36 ................................ GAGGAGCTGGACGATAACTTGGCTGCAAAGGAGACT 1430858 32 100.0 34 ................................ TTGTCCTGCCGGGCATCGTGATGGACCGGGCCTC 1430792 32 100.0 35 ................................ TTTTAACTTAAAAACTACCGCCTTTGCACGCTTAG 1430725 32 100.0 35 ................................ TGGGCCATCTGATAATAGACTATATGTACAAGGTG 1430658 32 100.0 34 ................................ AACACGGTTGGAGACGTTACTTTTGAAAGCGCGG 1430592 32 100.0 37 ................................ AAAAATTCATGGGTGAACAAAAAAATCCCGGTGACTC 1430523 32 100.0 33 ................................ AACCCTCGTGACGGGTATGCAGATATGCCCGTC 1430458 32 100.0 33 ................................ TGCGGCCAAGGCAGACAGGACGTAAAATAATCG 1430393 32 100.0 33 ................................ TTGATCATCTCACCCCCAAAACCCGCGTATAGC 1430328 32 100.0 34 ................................ ACGAGCAATTTGAAGATTAGCCGCGTTAGCAGAC 1430262 32 100.0 33 ................................ AAGGCAGATTTTTATCATAAACTTTACTGTGCG 1430197 32 100.0 34 ................................ AACTCCTGCAGGAGCTTCTGCTGTTATGCAAAAT 1430131 32 100.0 34 ................................ TTGCTTGCGGTTTGTCCAACGGTAACGGCTTACT 1430065 32 100.0 34 ................................ ACTTCGCTTAGATCCACGTTGAGGAGGTCCGCAC 1429999 32 100.0 36 ................................ AGTTCGGAAATGATGGAAGCGCGGGTTGCAGAAGTG 1429931 32 100.0 34 ................................ ATTCAAAACAGGACAAGAATCAAAATCCTGTGCG 1429865 32 100.0 34 ................................ CCGTAGCTGGTTGATAGTTGCTGCAGTTGCATCA 1429799 32 100.0 35 ................................ TGAATCGTAAGTAACTCGTTAGAATCAGCGTCAGT 1429732 32 100.0 36 ................................ AGTTATGAGGGCTTGGAGACCCTCTACCGGCGCCTT 1429664 32 100.0 34 ................................ GCCAGGAGTTCCACTGGGGTACACCCTCGCGCAG 1429598 32 100.0 35 ................................ TCCTTGGTTGGTTTGGTTTTGTTTGTTGTGGTAAC 1429531 32 100.0 34 ................................ GTTTGCGCGCATAGGCGGTATGCGTTCGGGGATT 1429465 32 100.0 34 ................................ CCATTGTGGCGAGTATGGCGACAGATTGGGTCGG 1429399 32 100.0 35 ................................ TCGGTCAGTAGTATATTGGATTCCAAGGGAGTTTA 1429332 32 100.0 35 ................................ ATGATAAAATATCTAAGGTTTAAAATATGGTGCAA 1429265 32 100.0 34 ................................ GCGGTTACGTCACCTGATCAGCGGCTGCAGCGTC 1429199 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 41 32 100.0 35 GTCGCCCCTCCCGCAGGGGCGTGGATTGAAAC # Left flank : GAAGCATATCCTCCATTTGTCTGGAGCTGATTATGGTTGTTCTTGTGACCTACGATGTGAGTACTGAAGATCGGGAAGGACGGCGTCGATTGCGCCGGATTGCAAAAATGTGCCAGAATTATGGGCAACGGGTTCAGTATTCCGTATTTGAGTGCACTGTCGATCCTGCACAGTGGACATTACTCAGAGCTCAACTTGTCGATATTATGGACCGAGAAAAGGATAGTCTCAGGTTCTATCATTTGGGTTCCAACTGGAAACATCGGGTTGAACACGAAGGTATAAAAGAACCTAGAGACTTTGATGCCCCGCTTATCTTGTGATGCGAACCTGATGCTGTTGCTCTTTTCCCGGCAGGTTCGCAATTTCCCTATCTGTTTTATATTTTAATAGTTATAAATGGCAAAGTCAATTTATAACCTGTGGTTTTTTGGCATACTGAAGGATTCGCAGGTTATCGGCTTAAAAGGCTTGATATTATTGGCTTTTCCAGTTATACA # Right flank : TATACCGGACCGGGGTCTGAGTTTTCTGGAGCATACTGTACCACTTATTCTGGGCTAAACTGTACCACCTGTTCTGGAGCAATGTGTACCAGGCATTCCGGAGCATAGTGTACCACCCGTACTGGGCGGATTTGTAACATCAATACCTGTACCTTTGGCATCAAAAACCGGAGGTGCAGATGGCAAACAAACCATTGGATATGTTACAAATTCGACGATGTCTCGTTCTCTTACAGGAAGCCCGTTCAGTCCGGCAAATTCACCGGCTGACAGGCATCCACCGCAACACGGTCAAAAGCTACGTGGAGCGGTTCAAGCACAGTGGCAAAACCTATGCCGAGCTTCTTGCGCTGCCAGACCATGACCTGGCTGAGCTGATCTACCCGCCACGCAACAACCATCAGGCTGACGACCGTTACCTCTATCTCTCAGGGCGATTACAGCACTATGCCGATGAACTGAAGCGCCCTCATGTCACCAGGCAGCGTCTTTGGGAAGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCCCGCAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.50,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //