Array 1 106700-108319 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALTS01000023.1 Streptococcus agalactiae GB00614 ctg7180000004400, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 106700 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 106766 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 106832 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 106898 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 106964 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 107030 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 107096 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 107162 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 107228 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 107294 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 107360 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 107426 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 107492 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 107558 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 107624 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 107690 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 107756 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 107822 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 107888 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 107954 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 108020 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 108086 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 108152 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 108218 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 108284 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //