Array 1 17683-16095 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKRA01000026.1 Acinetobacter nosocomialis strain TUM15365 sequence026, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17682 28 85.7 32 ...A.......TTC.............. ACTGATCAAGACCTTTGTCATAACGTTGTGAT 17622 28 85.7 32 ...A.......TTC.............. ATTTAAGAAAGTCTAGTTCAAGAGCCGTGTTC 17562 28 85.7 32 ...A.......TTC.............. ATCATTGCAATTGCTTGACCAAAATCTTCATC 17502 28 89.3 32 ...A........CC.............. CTATTCCAGATCAAAGATATTGTTCAGCAAAA 17442 28 92.9 32 ...A......A................. AAAAGGGAAAGATGTTTTTTGGGCCTGTTCTG 17382 28 96.4 32 ...A........................ GCTGCTATTGCTGCATTGTGGGATGACTACCA 17322 28 96.4 32 ...A........................ AAAACATTGGACAAACCCAAGTCATTGGTAAT 17262 28 96.4 32 ...A........................ CAGTCTTGCATCATTTTCCGTCTAGCCTCTAA 17202 28 100.0 32 ............................ TCAACTTCTTGAGAGTGTTCATAAGATTCTAC 17142 28 100.0 32 ............................ AGAATGGCAAGCGGCTTGCCTACGTTATCGCT 17082 28 96.4 32 .........T.................. TTGTGCAGCGGCTCCACTCTGAACAGCATCTA 17022 28 92.9 32 ............CC.............. AACTTATCAGCCACAATAAAAGACTACGTGAT 16962 28 89.3 32 ...CG.......C............... TGAACCGTCAGTCGGTTTAAAATCAACAGCTT 16902 28 100.0 32 ............................ ATCAAACAAATTCATTGTTAAAGGCGTCGACC 16842 28 100.0 32 ............................ TGAGTTCAAGTCCTACAGTCGGACTTGAACAA 16782 28 100.0 32 ............................ AGGCTGTGCTGTAATTAGTTTAATAGCCATGA 16722 28 100.0 32 ............................ CGTCGGTCATAAGTCCACCTTCGGAAAATCAA 16662 28 100.0 33 ............................ ATAATCAGACTGTGCATTTTTAAGTGTTTTTAC 16601 28 100.0 32 ............................ TTGTCGGCTGTCGGACGGTTGATCATGTAGAA 16541 28 96.4 32 ...........T................ AAAGCTATATGGCTAATGGGTTGGATATTGAA 16481 28 92.9 32 ...T.......T................ ACCACCTGTGGTTAAAAAATCCCCTAATTTTT 16421 28 92.9 32 ...T.......T................ TTCTCGATTTTCTTTAATTTTGAAAGCTTCTC 16361 28 92.9 32 ...T.......T................ AATGTAGTAAGATCTTGTGCATTTTGGATCTG 16301 28 96.4 31 ...C........................ AAAAGCATCCAAAGGCGTTGTCCTTGGTAGA T [16276] 16241 28 96.4 32 ..G......................... CTTAGCAGATAGTTTTTTAGGCGCTGGTGTTT 16181 28 92.9 32 ............CC.............. CAATATTTCGGAGTTCCACAACGCCGCAGACG 16121 27 85.7 0 A..A........C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 94.6 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATTGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGCTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTGTTGAAGACGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCAAAAATTTAGCCTAAGACGATTAGGTTATATTTTTGAAAATTAGAAAAATTAATATAATTCAATGGATTGTATTGTTGTTCTGTTTTGAAGATTTTTGATTCATTAAAACTTTATATTTTTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCAA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGACGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATTATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGAAGGTTTAGAAGAAATACGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGCGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCAACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCTGGGGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 22772-24478 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKRA01000026.1 Acinetobacter nosocomialis strain TUM15365 sequence026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 22772 29 100.0 31 ............................. ATCAAGTTACTGCAAAGCCTGTGTTGTCTGG 22832 29 100.0 31 ............................. GAACCGCACCCAGTCGGCGGCATATCGCAAT 22892 29 100.0 31 ............................. AGAAACTGGAATAGTGAAACTACCAAAAATT 22952 29 100.0 31 ............................. TGTGTTAATGATGTCCCAGTTAGTACGACAG 23012 29 96.6 31 ............................A TGCTGAGCCGTTCCAAGCCTCAACTTTACTA 23072 29 96.6 31 ............................A AGGTTATCAGTCAGCTGCTCAACAGACAGCT 23132 29 96.6 31 ............................A GCATTCCAAGAAGAAACAAGTATTTTATGCC 23192 29 96.6 31 ............................C AACAAGAAATTGATCAAGAAGCTTCCCATCC 23252 29 100.0 31 ............................. AGCTCTAATTGGATTTGCTCAGTACCACGGC 23312 29 96.6 31 ............................G TGTAGATCAATTCGGTCAGCCAATGTCCGAA 23372 29 96.6 31 ............................A AACTTCACATAATCAACATGTTGATAACCGG 23432 29 96.6 31 ............................A GAAGGATGCGAAATGTGTAATTAAACGAAGT 23492 29 100.0 31 ............................. TTCCCCTGCTCTGGCGTTCGCATAATGCCGA 23552 29 100.0 31 ............................. AAAAAACAACCAATCCCCACTGTATTATCGG 23612 29 100.0 31 ............................. AAACGGGTAAAAGCTTGCTCAACTTCTTGTC 23672 29 100.0 31 ............................. TCAGCACGACCTTTCTCGTACAAACGAAGCA 23732 29 96.6 31 ............................A TTCTGGATGTATTTAATGCATGGGTTATTTA 23792 29 100.0 31 ............................. TGCGTAATCATCTCGCGCTTGTTGTAATTTA 23852 29 100.0 31 ............................. TTTTGCCCGACAAAAATAAACCCCGCATCTA 23912 29 96.6 31 ............................A ACACTTTACGGTATGTTGGCCATTGGTGAAA 23972 29 100.0 31 ............................. AAAGCACCGCCACCACCTGACCAAATTATCC 24032 29 96.6 31 ............................C ATACGACTGCGAGACATAACCAAAAAGCGCC 24092 29 96.6 31 ............................A ATTACTTGTGCTCCGTTATATGCAGCTAACA 24152 29 96.6 31 ............................A TACATGTATAAAGGTAAACAGCATCATTTAA 24212 29 96.6 31 ............................C AAAACAAATTTAGGTATTGATAAAAATTTAG 24272 29 96.6 31 ............................C AAAACAAATTTAGGTATTGATAAAAATTTAG 24332 29 100.0 31 ............................. TTCGCCAAATCACGCATTACACGCTTAATTG 24392 27 82.8 31 ...AC.......--..............A TCCATTCAGTTGTAGAAAGACCGCCATATAA 24450 29 79.3 0 ....G.....A.......A.....ATT.. | ========== ====== ====== ====== ============================= =============================== ================== 29 29 97.1 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCTGATATAGCCAACAGCTACCTTGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAGTTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGCCTAGTTTTTGACCTAGCGGACCTAGTGAAAGATGCTTTTGTGATGCCACTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATTAAATAAAATCATATATTTAATCTAAGTACCTCTTAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGGTTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTAAATCTTAAAAAGAAAAAACCCCAAAACTTACGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //