Array 1 309020-308003 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFHG01000052.1 Methyloversatilis universalis FAM5 contig00070, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 309019 29 100.0 32 ............................. CCGGAGCCGGCCGCTATCCAGGGGCCGGAGGT 308958 29 100.0 32 ............................. TGCGACGGCAACCACGGCGGGCCACGGTGCGC 308897 29 100.0 33 ............................. GATCAGGAGGACGACTACATCGACGCGGCAGCC 308835 29 100.0 32 ............................. CCGTTGCCGTTGCTGCTGGCTGCTGACTGCGC 308774 29 100.0 32 ............................. CGCGTCGCCGGTGAAGAGGAAGTTGCACGACT 308713 29 100.0 32 ............................. GGTTCAGGTCGTCATTCCACCTTCGCTTGACT 308652 29 100.0 33 ............................. ACCATCAGCGAAATGCGCGCGCAGGGCTACGAC 308590 29 100.0 32 ............................. GCCGCCGTCGTCGGTCTGTCCGCCACGCTGCC 308529 29 100.0 41 ............................. CATTCGCGCCGCCGTGCTCGCCGAGCGCGACGAGTGGCGCA 308459 29 100.0 32 ............................. TCATCGCCAGCGTTCAGTTCGAGATTGTTGAT 308398 29 100.0 32 ............................. GCCATTCGCAGCACGTACTCCGTCAGATGGTC 308337 29 100.0 32 ............................. CTACTCGCGCCAGGCGAGCACCTTACCATCGA 308276 29 100.0 32 ............................. CCCTGAAATGACGACGGGTCCTCGGTGTAGAG 308215 29 100.0 32 ............................. TCGTCAGCCATCTCTGCATCTTCGCGGCTGAA 308154 29 100.0 32 ............................. TCCTTGAACGCCTTCTGGTTCGAGGCGTTGCG 308093 29 100.0 32 ............................. TGGGGCAATGCGATGGTAAAGGGCGCGGCGAT 308032 29 93.1 0 ......................G..T... | T [308006] ========== ====== ====== ====== ============================= ========================================= ================== 17 29 99.6 33 CCGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : AAGTGCGCGTGCTCATCCACAGCGAACGGATGCGGTGCAGGCCCTGCAGCGCCTGCTGCTCGACCGACTTCACACGAACGGGAGTGATGTCGGCATTGCGGGCGGCTTCGAGCAGTGCATGCGCGTCCGCAGCGTCGGTCTTGTTGCGCCGGACGTAGGCGCGCACATAGGCCGCGGGCAGCAGGCGAACCTCGATGCCGCGCGCCCCGAGCCAGCGCGCCCAGTGGTGCGCCGAGCCGCAGGCTTCCATGATGACGAGCGAGAAGGCGCGGTTGTTGAAGAAGGCTTCGAACTGGCGACGGGTCAGCCGATGAGATTCGACCGGTTTCCAATCGTCATGGGCAACGACAAGTTGAAATACACTCTTGGCCAGATCCACTGCAACGGTCGTAGCATTCATGAATGGACTCCTCCGTGTGAAGGCCGATCCCCGTTTCCGCGAGCACCGGCTGCGCGCATTGGGCGCGCAAAGAACGGGGGAGTCCATCCCATCATTCAAC # Right flank : CATAGTCCTTTCAGACCGTGACGGGGGAGGCCAGCGCCCTCATCTTATGGCTTGATCTCAGAGGTTGAACACGGCCTGAAGTACGCCGCCTTTTCGTCCAAGCTGCAGCCTGGCCACTTCGGCCACACTGGCCGGAACCACACTGGCTTCGCGCACCATCGCGTCGTCGGCGAGGCTGCGCGCTTACAACTTGGGATCCCTGCAGATGAGCAGCGCTGGCCCCGTCAATGACCGCTGATCAGCTCCGGTAATCCGCGTTGATCTTCACGTAGTCGTAGCTGAAGTCGCAGGTCCAGCAGGTAGCGCGGGCTTCGCCGCGGCCGAGTGCGACGCGGATGGTGATTTCCGCCGGTGCCATCGCGGCCGCGCCCTGCTCTTCCTTGTAGTCCGGGTTGCGGCCACCGTCCTTCGACACCAGGAAGTCGCCGATCCACAGGCTCACTTTCGAGGTGTCGAGGTCCATCAGCGACGGATGGTTCTGGGCGGCGTTGCCGACCGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 315289-310496 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFHG01000052.1 Methyloversatilis universalis FAM5 contig00070, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 315288 29 100.0 32 ............................. GCGGCATGCTGGAGGCCCGGCTTTTCGAGCCT 315227 29 100.0 32 ............................. GCGGCTGAGATCGAGGGCCGCATCACGCAAGA 315166 29 100.0 32 ............................. CTGGAACACCTGCAGCCGCCTCCGGTCGCCGA 315105 29 100.0 32 ............................. ACGTATCCCGCTGCGCAGGACACAGCCCGGAA 315044 29 100.0 32 ............................. CAGTTTCCGTCTTTCACTCGCTTTACCATTTC 314983 29 100.0 32 ............................. GTAGTCGCTTCTCTGATGGCGGTTTTCATATC 314922 29 100.0 32 ............................. GCGTCGTGGCTTAACGAGCAGCCGCGCGGCTC 314861 29 100.0 32 ............................. ATTCGTAATGACCTTGCGCCCCTTTTCCAGCG 314800 29 100.0 32 ............................. GTCGCGCATGCGCCGGCTCCTTCTCGCAAGGT 314739 29 100.0 32 ............................. GCTCCTGCACCCTCGCGGAGGACGGCGAATCG 314678 29 100.0 33 ............................. TGATGCGCGATACGCGCGGGTTTGTCTGGACGC 314616 29 100.0 32 ............................. CATGACCAGCGACACCAGCAGGTAGGGGTTGA 314555 29 100.0 32 ............................. CTACCGGGTCGTCTTTGCCTTTAACTAGGAAT 314494 29 100.0 32 ............................. CCTGCGCCACCATGGCAGCGGCGGCGGCGGGC 314433 29 100.0 32 ............................. ACGGCCTGTTCTGCCGCGCCGGCTGTCAGCGG 314372 29 100.0 32 ............................. CCGGGATGATCGAGCGCACTGGCGACTATCGG 314311 29 100.0 32 ............................. GGTTACACCATGGCTAAACTGTCCGCTGTCCT 314250 29 100.0 32 ............................. CTCACCCAGCCTTCGCGGATCGATTCCAGCCG 314189 29 100.0 32 ............................. GCTACGTGTGCATCGTCAAGGAAGCGACACGC 314128 29 100.0 32 ............................. GTACATACCGCTTGGGATTTGGGCGTCTCCGA 314067 29 100.0 32 ............................. CGGCGCCGGCCATCTGCCCGGCGCCAGCCGTA 314006 29 100.0 32 ............................. CCTGATGACCAGCAATGGGAGTGCCGAATCCG 313945 29 100.0 32 ............................. GTCGGAGTGTTTCCGACCGTTCTTTGCGTCGA 313884 29 100.0 32 ............................. TTAGGACTTCAATCCACCAACCAATTGAATTC 313823 29 100.0 33 ............................. TAAACAGGGGGTCTCTGCCAAGAAGCACATCGA 313761 29 100.0 32 ............................. CGGGCGGAATCGTTCGCGGCCGACTTCACGGC 313700 29 100.0 32 ............................. CATCAGACAAAGCCCCTAGGCTGCCGCAGTGC 313639 29 100.0 32 ............................. CGATTCCTGCCACGCCTTTCCGGCGTCCGCGT 313578 29 100.0 32 ............................. GCTGCGAACGCTGCGGCAGCGAAGCTCAACGC 313517 29 96.6 33 ............................T TCAGGCCCAACATACTTCAATTCTTGTCTTGGA 313455 29 100.0 32 ............................. CGTCCGTGCCCTGGGAGGTGTAGCAGGTACAA 313394 29 100.0 32 ............................. TTCCTGAACGGTCCGCATCTGTGCCCCCTTGG 313333 29 100.0 32 ............................. CTGCCGATCTTCTCCAGCAGCGGGCCCATCGA 313272 29 100.0 32 ............................. TAGCCAAGTGCAAACAGAGTGACGAGACCGGC 313211 29 100.0 32 ............................. CTGCTCGGGATGTCGGTATAGGACTGGAACAT 313150 29 100.0 32 ............................. AACCATCCGCCCGGAATACTGCGCCGCATATC 313089 29 100.0 32 ............................. GATCAGACGGAGCCGGCTGCGACTGCTGCTCC 313028 29 100.0 32 ............................. TATCGCCGTAGTCCTCGACGTGCGAGAACGGA 312967 29 96.6 32 ............................T TGGGACGGCGCCATTCGTTCTGTCACCTGCGC 312906 29 96.6 32 ............................T CGTTATCGTGATCACGTCGCTTTTCCTCGCGC 312845 29 100.0 32 ............................. GCTCCTGCACTCTCGACGAGGACGGCGAATCG 312784 29 100.0 32 ............................. GCGCCGATGATGGTCGTGCAGCCCACGCTCGA 312723 29 100.0 32 ............................. CTCAAGGGGTCGGCGCGTCGAATCGCGATCAG 312662 29 100.0 32 ............................. ATGGCGCCGGGCTGGGCGTCGCAATCAGAGTG 312601 29 100.0 33 ............................. TAGTCGCCCAGCATTTCGATGCGGCGCTCGTCC 312539 29 100.0 32 ............................. GGCCTGTTCCAGTCGGCCGAGAAAATCGCCGC 312478 29 100.0 32 ............................. TGTCGTTCCCTTTGATGCAATTCCGGATAGCG 312417 29 100.0 33 ............................. CCGATGCGGTCGGCGCCTTGCTTGGCGTTGAGC 312355 29 100.0 32 ............................. ATTTTTCGGCCTCGGCCGACTGGCTCCCAAGT 312294 29 100.0 32 ............................. GGATACCTGCCTAAGCCTGCGGTCACGGTACT 312233 29 100.0 32 ............................. TCGCAGGCGAGGCCCAGCAGGTGGGCGCTGGT 312172 29 100.0 32 ............................. ACGCCGGCCGAGCAGACGGAGGGCCTGCAGCA 312111 29 100.0 32 ............................. TGACATGGGCAAGCGTCTGCCGCCGCGCCGCA 312050 29 100.0 32 ............................. CGCCGCCTACATGTGGGACGCCGACCCTGCCA 311989 29 100.0 32 ............................. GTTTCCGCCGGCTGGTCCTGGCCATCCACGGC 311928 29 100.0 32 ............................. ATTCATACGGCGTGGGATTTGGGCGTCTCCGA 311867 29 100.0 32 ............................. GCAGCGAGCGATGCCGGACTGTTCGCACGGGC 311806 29 100.0 32 ............................. GCGCCTTACATCGGCGTCAAGGGTGCGTTCGA 311745 29 100.0 32 ............................. CCGGACAATAACACTGTGGCTCGTCATCGTCC 311684 29 100.0 32 ............................. CGACCGTTGGCCCACTCGTAGGCCCAAGAACC 311623 29 100.0 32 ............................. CCTGCTGTGGTATCGGCAGACCCAAATGACGA 311562 29 100.0 32 ............................. GCGATGGGACGCGGTGTGCATGCGCGGGAGAC 311501 29 100.0 32 ............................. GTTGATCGCGTTGCCCGTTGCGATGTTGCTGC 311440 29 100.0 32 ............................. TGCGGCGCCGATCCGGTACGGGAACGGGAACG 311379 29 100.0 32 ............................. CATCTGGTCTTTGTTGCCAGTGCCCAGGCCAA 311318 29 100.0 32 ............................. CACGGATGCGCTGGCGGGCGAGCGCCCGGGTA 311257 29 100.0 32 ............................. TCAGTGCCGCTGTCGTGCTGTCCTCATTGGCT 311196 29 100.0 32 ............................. TACGAACGCGCCAAGGCCGACCCGGTGAAGAT 311135 29 100.0 32 ............................. AGATCCGCACGCGCCGGCGCATCGCTACGTCG 311074 29 100.0 32 ............................. TATTGCGAATACCTCGAAGACGACCTGGCCGC 311013 29 100.0 32 ............................. CAACTTTCGACGCTCTGCACCGAGGCGATTGC 310952 29 100.0 32 ............................. GCCGCTCCCAGGTCGTAAGCACGGATGTTGCG 310891 29 100.0 32 ............................. GGTTTCATCATGGCTAAACTGTCTGCTGTTCT 310830 29 100.0 33 ............................. CCTGTCTGGAATACCGCCGACCAGCGGCCGGCG 310768 29 100.0 32 ............................. CTTGAGCGCGACAGGCAGCGCGACTTGGAAGA 310707 29 100.0 32 ............................. GATTCCGCCCGGGCGAACAGGCCGGCCGCATC 310646 29 100.0 32 ............................. GCGGTCGATCCGTCGATCATCGTCACCAGCCC 310585 29 100.0 32 ............................. GACTGGGGTTCGGCCGCCATCGATGCGAAATA 310524 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 79 29 99.9 32 CCGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : GCGCATCATCCCGGACATCGAAGACATGCTGGCCGCGGCCGATCTGCCGCGCCCACCTGAGCCCGAAGGACTGGTGGGCCCCGCCATCACCAACCCGGACAGCCTCGGCGATGCTGGTCATCGTAGTTGAGAACGCGCCGCCGAGATTGCGCGGGAGACTTGCAATCTGGCTACTCGAAGTGCGTGCGGGCGTCTACGTGGGCAACTACTCGCGCAAGCTCCGAGAGCACATCTGGGAGCAAGTCGAATCGGGCATCGAGGATGGCAACGCGGTACTCGCCTGGACGAGCAACAACGAAGCCGGTTTCGACTTTCAGACGCTCGGCGCAAACCGCCGCGAGCCCGTGGAATGGGATGGAGTGAAGCTCGTGAGCTTCTTTCCTCCTGCGCAAGACGACTCCGGTCTTTAACAACCAGAACAAATACCCCTGGCATGTATTTTTGCCGGTAGATTTTTTGCACTCGAAATTTCCATGGTTTTTCATGGAGATGGAGATAGT # Right flank : CATCCAACGTGGGGCCTAACCCGTCATATATGGACTCCCCCCAAAATCAAGACTGACCGATAGTCTGGTTTTCCCGGGTAGATCACTTGCAGTCGTATATCCGGCATCCGTAGTAGGTTCTGAGTGACCCGTGCCGACATGGAATCTGCGCGGGGCGCGCCAATCGATACAAACGGCACGCGTTTCGCTGCCGGAAGAGTTATCGGCGTTCGTCCCCGTGGGTGTGACCCGGTTGGCCATGATGGGCGATCTGTCTCGTGGCAAGCGGTGGCGGGAGGGGGTGACTCTGCTCAGGCAGCCACGGCGAACGAAGCCCGGTCTGCCTTTCTTGCCAGCCGGGGTTGGGGTTCACCGTAGGCGGTGGCATCGCGCAGCACGCTGTAGCAGATGCGTGCGAGCTTGTTGGCCAGCGCGCACGCGGCCTTGTTGTGGTGGGTACGCGCCTGGATGTTCACCGCCCACTGGCGTAGCGCGTCCAGCTGCCGGTCGGTCCTGGCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //