Array 1 107262-103512 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJTC01000007.1 Xylophilus ampelinus strain CECT 7646 Ga0244619_107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107261 29 96.6 32 ............................G ACAAGGTCAGTCGCACCGAAGACAGGCAGACC 107200 29 100.0 32 ............................. TCCCGAAAATCAGGATCGATAGCAGAAAGCAT 107139 29 100.0 32 ............................. CGTCGCTTGAAGGGATGTAGGCTTTGCATGCA 107078 29 100.0 32 ............................. TTCTTTCAAGAAAGATAGATTCGCCGGTTTGC 107017 29 100.0 32 ............................. CAATACGGGATTGGGTGCAGTATCGATCAATG 106956 29 100.0 32 ............................. TTATCGGATTTGGTCTGTTCGGCTTCTGCCGC 106895 29 100.0 32 ............................. CCCTCCGGATACTGCTGCTTGTACAGCTCAGG 106834 29 96.6 32 ............................T TTTTCCTTTGCCAGTGGACCGACTGGCAGCGG 106773 29 100.0 32 ............................. ACTTGTTGAGACTGAGACAAGCCCAGCCGCTG 106712 29 96.6 32 ............................G CGTCCGCGAAAGCGGCGCGGGAATGCACGCGC 106651 29 100.0 32 ............................. GTCCAGACGTAGCACGGTGGTCCTACGTCAAA 106590 29 100.0 32 ............................. ACTTGTTGAGACTGAGACAAGCCCAGCCGCTG 106529 29 96.6 32 ............................G CGTCCGCGAAAGCGGCGCGGGAATGCACGCGC 106468 29 100.0 32 ............................. GTCCAGACGTAGCACGGTGGTCCTACGTCAAA 106407 29 100.0 32 ............................. TCCGGCTTGTACTTGCGCTCCTCGGTGCTGAT 106346 29 96.6 32 ............................G TCCGAATCCGCCTGCCGAGGGACTGCCTACCG 106285 29 100.0 32 ............................. ATGGTGATGGTCACCCTGACCTACCGGGGCGA 106224 29 100.0 32 ............................. CGGAGTTAACAATGATCCAAGTATCCGTGACG 106163 29 100.0 32 ............................. GTTGACGTGCTGCTGATCACCCAGAATTTCCG 106102 29 100.0 32 ............................. GCATCCCAGACGTGGGAGGAGTGCGTCAGGAG 106041 29 100.0 32 ............................. TCTTCGGCACGAAATTGCGGGGAATAATTCCC 105980 29 100.0 32 ............................. ATCTGCTGAAGGTACTTTTTGGTTGCTTGTGC 105919 29 100.0 32 ............................. GATGGAGCTATCAGCCAAGGTGCCTACGCCAC 105858 29 100.0 32 ............................. GTTTAATACTCCCGTAGATACATCTAAGGCTT 105797 29 100.0 32 ............................. TTAGCGGCTTGCGTTGCGGTCTTTTCCCATTC 105736 29 100.0 32 ............................. ACCGCCGCTGCGCCACCGGCCAGGGCCTTTCC 105675 29 100.0 32 ............................. TTGTGGCGCTCGGTGAAGCCGAACAGGCCGCC 105614 29 100.0 32 ............................. ATGGGGACCATGCCGGCACCGGATTGGCCGGG 105553 29 100.0 32 ............................. TTGGTCGAGATGAAGAAGGGGCGGCGACCAGC 105492 29 100.0 32 ............................. CAATACCGGTAACAGACAAACCGCTAAGGCCC 105431 29 100.0 32 ............................. CCTGCGGACGAACGTTTAGACCAGCTGCGCAC 105370 29 100.0 32 ............................. GTTTCGTCTTCGCCGGGTTTATCGTGGATAGG 105309 29 100.0 32 ............................. AGGCGTTGACTCCTCAGCAAGTAGAAAAGCGT 105248 29 100.0 32 ............................. TAACAATAGGTAATCATCATCCGTATCAATTG 105187 29 100.0 32 ............................. TTCACGGCAAGCTTCTTGAGGCCCCAGATGGC 105126 29 100.0 32 ............................. CAGCCAGCGCGAGCAGTGCGACCCAGATCAGC 105065 29 100.0 32 ............................. TGGCAATGCGTGCGGGAGACCTCTGACTGTGG 105004 29 100.0 32 ............................. GGGACTAGAAGAAATCACATTGTCTTTAAAGT 104943 29 100.0 32 ............................. AGGCTACAGCACCCGCACAGGCCCCGGCACCT 104882 29 100.0 32 ............................. CTCGGCCAGAGCCTCATGAGCGCCGGCGTTGC 104821 29 100.0 32 ............................. TACAACAACCTCGGCAGCGATCGCTACTAGGA 104760 29 100.0 32 ............................. CGCCCGCTCAGCGGATCAAGGCCCCGTAGTCC 104699 29 100.0 32 ............................. TGCAGTGCGATGCGGTGTGCGTGTCCCAAAGT 104638 29 100.0 32 ............................. TCGTACGCGCCGTTGGGCTGGTACCCCAGCGC 104577 29 100.0 32 ............................. TATAACGGCCCCGCCAATAGCCGCACCTTTCA 104516 29 100.0 32 ............................. AAAGAATATCCCGGTATGTTTGAATGGGCTAA 104455 29 100.0 32 ............................. AGGCTATCGAAGCCCACCTGGACGACATCAAG 104394 29 100.0 32 ............................. CGCCGCGGCCAGACCTACACCTACCAGGGCCA 104333 29 96.6 32 ............................G CATTTGTCTTTTCCGTTCAAGGCCGAGTGCGA 104272 29 100.0 32 ............................. CAGCATGGGGCCAGTAATTAGCGGCTAAGTAA 104211 29 96.6 32 ............................G TCATGGAAGACGGCGTGTGTACCACCCCAAAA 104150 29 100.0 32 ............................. GACTCTTTCGAGCTCCGATCGACGGCTGCCTA 104089 29 96.6 32 ............................G TATCTGCAGCATGAATTCCCCCATCGCCGAAG 104028 29 100.0 32 ............................. TGCAGAGCCGTATCCTGTTCCGTCGTGCTGAC 103967 29 100.0 32 ............................. CAGATGAGCAGCGGGATCAGCACCAAGCAGAA 103906 29 96.6 32 ............................G TAGCCCACGCCGTCGAGTGGAAGAACACGTCC 103845 29 100.0 32 ............................. TGGTGAGGTCCTTGCCGCCGAATTTGCGCCTA 103784 29 96.6 32 ............................G CCGCTCCAGCCAGCGCCAAAGCAGTCCACCTG 103723 29 100.0 32 ............................. GTCGAGGCGGAAGAATCCGGCCCACTCGATGA 103662 29 96.6 32 ................A............ CGGCTATGCCGAAGTCGGCTGCGACACGCCCG 103601 29 100.0 32 ............................. GGCCGGTGATCGACGTAGGCCCTGCACGCCGC 103540 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.3 32 GGTTGCCCCGCGTGAGCGGGGATAGGCCC # Left flank : GAACAGGTGAATGACTCGATAGACCGGCTGGTGCGACGCGAAGCTGCGACTACGTTTCGCAAACAGCAAGTAATTGGCGGGATGATCGACCGTATCAAGGCGGTTTTGCGGATGGAGGAGCTAAACCATGGCGTTGGTGATGATCGTGATCCGTGACGTGCCAGATCGTTTTCATGGTTTTTTGTCTTCGGTGATGCTGGAGGCAGCGCCCAACGTGTTCGTTTCTCCAAGAATGAATCCCGGCGTGCGTAGCCGCGTTTGGGATGTTATGAGCGATTGGCACGGATGCGAACCGCAGGGCAGTCTGGTCATGATCTGGCGTGACCTGAACGCCGTGGGTGGCGTGGGAGTCGCAAACTTGGGCAATCCGCCAAGGGAATTGGTGGAGGCTGATGGCATGTGGTTGGTCAGACGACGTGGACTATCATGCAAAAGCACTCCTTAAAATTTTGAATGCAATTGGTGCTTTCTCCTTACGGGGCTTGATGTTACATAGGAGG # Right flank : TTCTTCGTAAGCGTCCGACGAACACGCCCTTGACGCAGCGCGCCGCAGTGAGCTGATGGCAGAGGCTGCCACCGGTGCGGCAGCAGTTCAGCGACGAAGCGCACCTTGTGCGTCGGCAAGCGCTGCAGCACATCCTTCAGATACGCATGCGGGTCGAGCCCCTTGAGCTTGGCCGACTGGATCGAGCTCATCACGGCCGCGGCGCGTTGACCCGCGCGCAGTGAGCCCGCGAACAGCCAGTTCGAACGCCCGAGTGCGATCTGGTTCTCGACCCAGTTGTTGTCGATCGGGAGCTGCCCGTCGTCGATGTAGCGCGTTAGCGCAGCCCATCGCTTGAGGCTGTAGTCCAGTGCGCGCGCCAGACCTGTTGCGTCCGTCGCGCGCAGACGTTGCGCGAGCATCCAGGCGTGCAGCGAATCCGCCAGCGGGTGCGCCTTTTCTTGTCGCAGCCGCAGTCTCTGGCTCGTATCCAGGGTCCGCGCTTCGCGCTCGATCTCGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGCCCCGCGTGAGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //