Array 1 113585-113154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHY010000006.1 Parabacteroides distasonis strain BSD2780120875b_170604_D7 NODE_6_length_253724_cov_31.4139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 113584 47 97.9 30 A.............................................. CATCCCTTCGGAATGTCAATGACCTTGCTT 113507 47 100.0 30 ............................................... AAAGATAATAGGTACTTTCTTCACTCGCAA 113430 47 100.0 29 ............................................... ACATATAACGATGTAATACAAAGGGGGTG 113354 47 100.0 30 ............................................... TACTCTTACAGAATCTATGCTACGGCGAAA 113277 47 100.0 30 ............................................... AAGTGCTTCCGAATACAGGACGCAGCAACA 113200 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 99.6 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : ATCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGGCTTGCTTCCAAATTCAAAAATATTTTTTTACAATAATCTATTGAACAACGTATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACCAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTTTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGATAGGAAAAGAGACATTTTGAGGACATCAAAGAGAATGGCTTATTTTTGGTGCAATTGCCCCAATATTTTGCAATATTTA # Right flank : GCATCCTCTATTAAAAGCTATTAATCAATGGATTACAAAGCACATCAGAATTAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCAGGATTTTTCTTTTAAAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCATCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTTCCATGCTCTGGAAGAAAAGATTTAATTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGACGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTCTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCACTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 61357-61514 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHY010000010.1 Parabacteroides distasonis strain BSD2780120875b_170604_D7 NODE_10_length_195368_cov_32.5128, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 61357 26 100.0 40 .......................... TAGAAACAACCGTGTCATGAAACCCGTGATCGCATGCGCA 61423 26 100.0 40 .......................... CAAAAACAACTACTTTATTCATATACTACTCGTCCCATTG 61489 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ======================================== ================== 3 26 100.0 40 GTTGTATTAGCCTTTAGTTTGAAAGG # Left flank : TTAAAGAAGGCTACTCCCGGAAATTATTATGATTTTAATGAGCTAATTACAGAATATGAGAAACGAACTAAACAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAAGGCTACTCCCGGAAATTATTATGATTTTAATGAGCTAATTACAGAATATGAGAAACGAACTAAACAAAAGATAGATAGTTCTTTTCTCATTAAAACTCGGAATATGTTCTTACATGATAAATACGAAGCTGAATGTATCAAAGAGATTTCTGACGATTTCGTATATGCAAAAAAGATTATAGCTGAATTTAAAATGAAGATAGAAAATATAAAATTAGAAGACCTTTCGAATGACTCATCAGCATAAAAACATTTTATGCTCTTTGGTTGAAAGGTAGAAACAACTTTCGAGGATTATTTTTATGCTTTACGGCA # Right flank : GCAAAAACAACACAGGCATGGCTATCCGAAAATAATTTGGATTCATCAAGAACTTATTCTATCTTTACAAAAAGATTAGATATCAAATATATCGAGGCCATGCGAGATATTTGAAAAAGATAAACTTCATTGAAGGAAAAGCCCGCAAAGTAGGATCATGGCCGGTCTGAAATGCGGGCTTTGTTGTTTATGGAACTAAAAGAATTTATTAAATCCGCTATAACCCAGCTTTCGGAAGCTGTTTATGAATTAGATGATGAATTGAAAGATAAAGGAGTAGTGGTAAATCCATGCTATGCAGAGAATACAAACTTTGAGACGATAGACAATAGTGAAGGTGTTATTGTTTCATCAGTAGAGTTTGATCTACAAGTCAGCACCTCTGAAATAAAGGAAAATAGCGGAAAGATCGGTGTATTAGCCAGTGTAGTAGGTATAGGCGCTTCAACCAAAGAAGGAAGCAATGGAAATGAGGCGAACCGAATAAGGTTCAAGTTACC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATTAGCCTTTAGTTTGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //