Array 1 71014-72751 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRKM01000011.1 Raoultella terrigena strain C47 NODE_22_length_166845_cov_136.781, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 71014 29 96.6 33 ............T................ GAGCGGGCCAATAACGACCCGCGCGTCTTCCGC 71076 29 96.6 32 ............T................ CCGGTGCAGGGTGGGACGATGGTCGATTACGA 71137 29 96.6 32 ............T................ GTTGCACACCCGATTCATGGCCGCCCATTCAC 71198 29 100.0 32 ............................. GCTTCGCAATCTTCGGCACTGGGGTAACACGT 71259 29 96.6 32 ............................A GCACCACCATTATTCCGCCGAAGCCGGAAGAC 71320 29 100.0 32 ............................. GCATTAATCCGGCAGATTGAGCAGCTCAGGGT 71381 29 100.0 32 ............................. CATCAGACCTTCGAGGCTGAAGTTATAACCGG 71442 29 100.0 32 ............................. GCGATATGCGCAAACCATCGTGTCGATGATAT 71503 29 100.0 32 ............................. TAGTTGTTCAGAACTCTGGTGCTTTTGCGTTA 71564 29 100.0 32 ............................. GCGATAACTTCACGCTGGAAACGGCGGCCTGT 71625 29 100.0 32 ............................. ATGACCACGCGGCGCCATTCAGTCTGTTCTTT 71686 29 100.0 32 ............................. CCACCGGGCATTCACCACCAGCCCAATCAATC 71747 29 100.0 32 ............................. CCTATGACGAACAACGCGCCAGCGGCAGCCAG 71808 29 100.0 32 ............................. ATGGCCGCTGGCCAAAGCGGTGCTGCGATGGC 71869 29 100.0 32 ............................. CTGCCAATCACCGTCCAGATCGACGCGATTAC 71930 29 100.0 32 ............................. CCACGAGGAAACGCACACCGCGGGGGACAACT 71991 29 100.0 32 ............................. GCCTGGCGGATATGGTCACCTACATCTCATCG 72052 29 100.0 32 ............................. CGCTGCGCGTGCCCACTCGATAGCGGCTGTTT 72113 29 100.0 32 ............................. GCCAGCTTCTCCACGATGGCGCCGGCAACATC 72174 29 100.0 32 ............................. TTTTCCTTCCAGGCCTTGTCCAGCATCCAGGC 72235 29 100.0 32 ............................. CCCGTCCTCTTCACACTCTATCTTGCGGGCAA 72296 29 100.0 32 ............................. CTTGGCGGGGAGTTTGGCCTATGACCACGGAA 72357 29 100.0 32 ............................. TACTGATCAGTGATTTTGAACATGGCCTTTCT 72418 29 100.0 32 ............................. GAATCTCTATTTAACAATAGACTGCGGCTGGG 72479 29 100.0 32 ............................. TTCTGGTACCGTCCTGGCATCGAGCGGGGGTG 72540 29 100.0 32 ............................. CCCGGCGCAGCCGGCAACGGTTTGATAGGTTC 72601 29 93.1 32 ..........................T.A TGGGGACACATGGCGCACAAAACCTCAAAGCA 72662 28 93.1 32 .............T.......-....... CTCCGCAGCGTTAACCTCAAACCGCGCCAACG 72722 29 89.7 0 ...........A............G...C | T [72746] ========== ====== ====== ====== ============================= ================================= ================== 29 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTCGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGGGTATGCTGGTTGTTGTGACTGAAAATGTACCGCCGCGACTGCGAGGAAGGCTGGCAGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAAGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATTTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTTAGTGTGTTGAAAAAAGTCTTTTAATTCAGTTGCATAGCGTTAGA # Right flank : CTTCCTGGGAGACCAGCAAAACACCGGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGTTCGATGCGCCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGTGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCAAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAATACTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTTAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTGAGCTTGCGAATCGATGCCGGCGTGCTGCGACCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAGGTTGATCACCAGCAGGGTGTTTTTCTTCTCCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //