Array 1 5683720-5681102 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014999.1 Pseudomonas aeruginosa strain PA7790 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5683719 30 100.0 39 .............................. ACTTTATTGCCAGGGCGAGACGACAGCGAGCGGGCTGGT 5683650 30 100.0 37 .............................. ACCGTCGAGTTGCGTGATGGCAACAGCGTGACGGGGT 5683583 30 100.0 36 .............................. TCTTCGCATCTGGCGATCCGCGCGGCGAACCGAAGT 5683517 30 100.0 37 .............................. TGGTCTGGTGGATTCCTGGCACGAAGGTGTGCTGGGT 5683450 30 100.0 37 .............................. GCTTCTGACGTAGCGAGTTGCTGACTGGCGCGTGAGT 5683383 30 100.0 36 .............................. TTCGCGGGCTCGCCCATCTTCGGCTCCTGAGGCTGT 5683317 30 100.0 37 .............................. CGCCAGTTTCCAAGTTGAAGCGTTGTCGGTGTACGGT 5683250 30 100.0 35 .............................. TTGGCCGGCTCGCCGAAGGCCTTGCCGTCGTTCGT 5683185 30 100.0 35 .............................. ACGATCTCGCAGCAGTAAGCCAGTGCCGGGGTCGT 5683120 30 100.0 36 .............................. TGAAACGCGCAAACCGCTACGTCGGGGTCCACAAGT 5683054 30 100.0 37 .............................. TCATGCTGCAATTCTCCTGCGCATGTCAGCCTCAAGT 5682987 30 100.0 37 .............................. AGCAGGCACGTACCGCAGGCTCTCGAAATGTTAATGT 5682920 30 100.0 37 .............................. GACAAGCCACCTACCCACTCCTACAACCCTTTCGCGT 5682853 30 100.0 35 .............................. ATGGTCCTTGCCCTGCTTCGGCGAAGGCTCCTTGT 5682788 30 100.0 36 .............................. CCTGAACCGTTGCTGATCGAGGCCGATGGCCCAGGT 5682722 30 100.0 37 .............................. ACCACGCAGACGCTGGACGGTCTCACCTCCGCTGTGT 5682655 30 100.0 37 .............................. ACCGCCACACTGGAGTTGCGTGAGCGACCCATCATGT 5682588 30 100.0 38 .............................. GCTGCCTGGCAGGCCTGCTTGAAGCCGGCCGAAAGCGT 5682520 30 100.0 38 .............................. ATCGCCGCAGACGCTACGCAGGCAGAGACCACTGCCGT 5682452 30 100.0 36 .............................. AGGCCGAAGCGCCGTGACTTGAAGACCTTGCCGAGT 5682386 30 100.0 36 .............................. TATTACGGTTCTGGGTGCAGCATCTGCGGGGGTGGT 5682320 30 100.0 36 .............................. TGGGGCGAGCTGCGCGGCAATCCGGCCGACCCCAGT 5682254 30 100.0 35 .............................. TCGATCCGTCCTACGCGCTCGCCTACGCGGTTGGT 5682189 30 100.0 36 .............................. AACTATGAGGTCGTCGAGGTCAAGACGGTGACCGGT 5682123 30 100.0 39 .............................. CGGACGCCCTTCGGGCCGAGGAGGATCACCTTGAACCGT 5682054 30 100.0 37 .............................. TTGCGCGGCTGGCCGCCGGCGGCCTGGCTGTGGTGGT 5681987 30 100.0 35 .............................. ATCTGCCACCGCGCCGAACTGGTGCTGCAGACCGT 5681922 30 100.0 36 .............................. GCGTGCTGCGCGAAACCCCGAAAGCGCACATCGTGT 5681856 30 100.0 36 .............................. TATCGCCAGTGAAAACCAGTTTCCACACTGTTCCGT 5681790 30 100.0 37 .............................. AGCGCGAAATCCCCGTTGGGAGAGAGTTTCACCCTGT 5681723 30 100.0 36 .............................. TTTTGCTCGGCTACGACTGTTCGCTCGAGCACGGGT 5681657 30 100.0 36 .............................. CAAGTCAGGCCGAAGAAAGAGACGATATAGCTGGGT 5681591 30 100.0 36 .............................. ACCTCGCCGGTGCGCAGATCGAAAACGCCGGTAGGT 5681525 30 100.0 36 .............................. GATCCGTTCTTCATGGCGGTCGTCAAGGAGATAGGT 5681459 30 100.0 35 .............................. AGCGGCTCATGGCTCCTGCTGTTGCGGAACCCTGT 5681394 30 100.0 36 .............................. CTTCTTGAGATTGTCGAAGACGAATCCCCACTTGGT 5681328 30 100.0 36 .............................. GGCTACACGTTCTTCGCACCCTCGTTAGAGGAAGGT 5681262 30 100.0 36 .............................. GGTAGGTTTCATAACTGAAAATCTAGAAAACCGTGT 5681196 30 96.7 35 ...............T.............. ACGGTCGCGCTGGCGGGATGCGCCGGCCAGGTGGT 5681131 30 93.3 0 .......................G.....G | ========== ====== ====== ====== ============================== ======================================= ================== 40 30 99.8 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGGCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTGGATAGCGCGCAGTGGACATTCCTTAAGCATCGTCTGTGCAACCTAATCAATCCGGAACAAGACAGTCTACGTTTCTACTACTTGGGTACGAACTGGCAGCATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTTAATGGCCCGCTGATTCTTTAGCGCCGGCGCGAACCTAAAGCGACCGACCAAACCCTGGGGGGTTCGCAATTCTCTAGCTGATTGATTTATAAACTCTTTCTTTGAAGTTAGGAGTTTGAAGGCGCGCGCCTTGCTTAAAGAAGGCATGTTTCGCTGAAGTAAGAGGTTTTTTTCATGCTGATCAATAAGTTATAAGAGGGCGGT # Right flank : ATAGATTTTGGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCCCAGAGTCTGGCCAGGAACTCTTGTGTCACGGTGTCGCGGCCCCAGGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGGCTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCAAGGGGCGGTGAAGCCCCTCGGGGTGTAGTCCAACTGGTGCAGGGGAGCGTGGTGGCTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCCCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCGGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACTGTTGGTCCTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //