Array 1 203456-203846 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPSM01000016.1 Pectobacterium brasiliense strain CFIA1001 scaffold18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 203456 27 89.3 32 T.........-...C............. CAGCAGTGAAACAAGTACATCTACATCACTGC TA,G,C [203459,203462,203472] 203519 28 100.0 32 ............................ TTACCCGGATGGCAGTCGGCGACGGTGGCGGA 203579 28 100.0 33 ............................ TGGAAAGTGTCGGTTCAGAGAACGAAACGAAAT 203640 28 100.0 32 ............................ GCCAACACCGAGAACCAACTACGAACCAAAAC 203700 28 100.0 32 ............................ TTACTTTGCTGACCTGCCGGATTACCTGGCTA 203760 28 92.9 32 ...............A....T....... AGGGCGCGTGGGTGCGACTGGAAGATAAAGAG 203820 27 89.3 0 .............C.........-..T. | ========== ====== ====== ====== ============================ ================================= ================== 7 28 95.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ACGTCTTTAAAAAATACGTCGCTTCCTGCACAGTTAATATGGCATGAATGTTATCGTTATTTATTTCATTGAGTTGAGCATGTAATTTCTGATAGTTAATATCAGCATACTGCTTTTTAAAATCAAGATGATCTTCTAACCGATAGTCATCATCCACAAGCGTTTTTAAAACCGGATCGTATTTCACAGTCGCTTCACTCCTTTGAATTTTACTTAAGTCAACGCACTATTTCCCTGTAAGGCTACTTTAACGGAAAAATGATGATTTTTAAATGTTAATAACGTTCAATCCGCAATTTTCCATTCCCCACAAAGAAACCCGTTACTTAAAAATGTTACGAGAAAGGGAAATCAAAAACACGTTATTTAACGACGATAACACATCAAATACTGACGATGGTGCTACCTCGATAATAGCCAGACAGCAGCACTTAATGTCGTGGATAAACTGCCTGTACGGCAGTGAACCTGTGCTTCTAATTCGCAGACTACAGAGCGGA # Right flank : ACTATCGAAATGCGTCGCTGGTGCGACGCATTTTAGAGGCTTATTCCCCGTTGAGGGTAACCACCAGCGAGCGGCTGCCGCCATGGTTGCGGTGCTCGCACAGGTAGATGCCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGAATCGTTAGACTGTTGCCCAGCAGACTACCTTTTAGGTGCGCGGGCATGTCGTCGCTACCTTCATATGTATGGCGGTAATACGGCTCATCCTCCGGCACTAACCGATTAAAAAAGCTCTCGAAATCATGCCGCACCGTGGGGTCGGCATTCTCGTTAATCGTTAGCGCCGCCGAGGTGTGTTTGATGAACACCTGCATCAGCCCGACATTTATCTGGCGCAGTCCAGTAACCTGCGCCAGTATTTCGTCAGTCACCAGATGGAAGCCTCTGGCTTTCGGCTTCAGGCGGATTTCATATTGCATCCACATCGCCGCCCCCTGCTATCAGGCTTCGCGTGCCAGAATCGGC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //