Array 1 144627-143622 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAVSJ010000004.1 Escherichia coli strain EC141 4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    144626	    29	  96.6	    32	............................A	AATACAGGACCAATATTTTGATATATATAATC	
    144565	    29	 100.0	    32	.............................	GTGATTCTGGCAATACTGGCACTTCCGTTTTG	
    144504	    29	 100.0	    32	.............................	TCGCCTACGAACATCAGCCGGGTGCCTGTGGA	
    144443	    29	  96.6	    32	............T................	TCGCCTACGAACATCAGCCGGGTGCCTGTGGA	
    144382	    29	 100.0	    32	.............................	GATCAGGGTATTACACTCGACGGCGGCATGGA	
    144321	    29	 100.0	    32	.............................	CCACCTCAGCCTGCGCGCCCGCTGAATATTCC	
    144260	    29	  96.6	    32	...........T.................	GGACGCGTTCCATCAGGGCGGGTCCAGGGAAT	
    144199	    29	 100.0	    32	.............................	CAGGCGGCGCAGTGGCGCATGAATCCGTTCGC	
    144138	    29	 100.0	    32	.............................	TTCTTGCGGGCGTTGCAAATATTCTCCACGTA	
    144077	    29	 100.0	    32	.............................	GTAATTAAATGTGGCAATCGTACACAGAAAGC	
    144016	    29	 100.0	    32	.............................	AGCGAGAATGAGGCCGCTCAGGTGGCTAGTCA	
    143955	    29	 100.0	    32	.............................	TCGAGCGCCTCGCCTTTTAACTGATGCCGTGG	
    143894	    29	 100.0	    32	.............................	GCCCTTACCGCCGCACGGACATGCCGGACGGT	
    143833	    29	 100.0	    32	.............................	GCATGACGCCACGAGATAACAGTTACGGCGTT	
    143772	    29	  96.6	    32	............................C	GCTTCCAGTTCATCCAGCGCCGTCAGCGTTTC	
    143711	    29	  96.6	    32	............................A	GCCAATTGCCATATATGCCATCGCCAGCAGCC	
    143650	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  98.8	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACTCGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTTA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.24   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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