Array 1 17712-16664 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVDU01000081.1 Pseudomonas aeruginosa strain PABL019 NODE_81_length_17829_cov_69.2158, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 17711 28 100.0 32 ............................ GATGGCCGGAAGCAACGGCAAGGGCTGCAACT 17651 28 100.0 32 ............................ CAAAGCGTGGCGAATATCTACACCCGCTCGCA 17591 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 17531 28 100.0 32 ............................ GCAATCGATCAAGCTATGACCGCCGAAGCCTA 17471 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 17411 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 17351 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 17291 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 17231 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 17171 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 17111 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 17051 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 16991 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 16931 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 16871 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 16811 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 16751 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 16691 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //