Array 1 221739-223478 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDBT01000003.1 Nocardia shimofusensis NBRC 100134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 221739 28 100.0 33 ............................ CTGCGCGATCACCGGGGCCAGGGCGAGAGCGAT 221800 28 100.0 33 ............................ CTGGATGCTCGGGAAGGGGTTCGGGCACAAGTG 221861 28 100.0 33 ............................ CACCTCGGAGAGCACGTCCTCGTCCCAGGCGCC 221922 28 100.0 33 ............................ CCCGCTGCACAGCAGGAAGCGCCTACCCCTAGG 221983 28 100.0 33 ............................ CGCATCCACCACCCGCATCGGCCGCGACACATG 222044 28 100.0 33 ............................ CCGTGCGTCCCGGTCTCCGTCCCGAATCACTGA 222105 28 100.0 33 ............................ CTCGGCGACCAGATTGTGCTTCATCGCGAGGAG 222166 28 100.0 33 ............................ CACCGGGTCGCGGCGCTCAAACCGCATGCCTTG 222227 28 100.0 33 ............................ CGCGGGCGAGACCTGGGCGCGGATCGCCACGGC 222288 28 100.0 33 ............................ CTCCGATGAGGACGCCGTGCGCTCGCTGACCGG 222349 28 100.0 33 ............................ TCGGTCGCGGTACTCGTCGAGCGTGAACCCGTT 222410 28 100.0 33 ............................ CTGGGCAGTCGCCAATGCGGTGTCCACGTTGAC 222471 28 100.0 33 ............................ CTCACCGCAGTTCTGCAACGAGCGCGCGACGAA 222532 28 100.0 33 ............................ GTTGTTGGATGCGAACGACACGCGGGCGCCGGT 222593 28 100.0 33 ............................ CCGGCAGGTGCCGATGATCCACGGGTAGTCGTC 222654 28 100.0 33 ............................ CGGCCCGTGACGTCGTAGGACTCGAACTGTCCA 222715 28 100.0 33 ............................ CTTGGACGGCACGTTCAAGCCCATTCAGATCAG 222776 28 100.0 33 ............................ CCAGCAGCCCCCAGGGCGTCGCGAGCATGTGCA 222837 28 100.0 33 ............................ CGGCAAAGCGCCGACCGGCCTGCACGGCGACTA 222898 28 96.4 33 ...A........................ GCGGCAATCACCCCATGCTCCTTGAGCCAGTCA A [222919] 222960 28 100.0 33 ............................ ACAGACCGAGGCGCAGGCCATCGCCGGCGACGT 223021 28 100.0 33 ............................ GGACAGAATCATGCCGATCAGGCCACCACCCAG 223082 28 96.4 33 .........................A.. CAGATCAGACATGGTGCCTTCCGCTCCTGGTGC 223143 28 100.0 33 ............................ GTGAATGCCGGTGCTGATGCCCTCGGCGGCCCG 223204 28 100.0 33 ............................ CGCGATCTGCAGCAGCCGCTCACCATCGGTGGT 223265 28 100.0 33 ............................ CTCCCAGGTCTGGATCCCCAGGCCGGTGTTCTC 223326 27 92.9 33 ......-...T................. GGTGTCCGGGATCAACCTGGACGAGGCCGTGAT 223386 28 92.9 33 ..........T..........A...... CGCCTACATCCCCGGCGAGGGATCGGTGGCCGA 223447 28 82.1 0 A.......G.........C..AG..... | TTTT [223464] ========== ====== ====== ====== ============================ ================================= ================== 29 28 98.6 33 GTCGTTCCCGCGCACGCGGGGGTCGTCC # Left flank : ACTGGGTCAAACAGTACGACCACCACGCCACTACCCCACGTGCAACCGGTGAGCATGTCAGCTTCACGGTCGAACTCGCCGCCCTCCGTACCCCACGTGTCCACGTCGACCCTGCCGTACATGCCAAGCTCAAAGCAGGCGCCGACGGCACAGCCCGACCACCCGGCCAGGGAAAAGCCTACCGAGCCAACAAGGTCCCGGTGCCCCGCGACCAACTGGATGAATGGCTGTCCACAAAGCTCACCCGGCACGGAATCGCAGCCGAACGTGTCGAAGTCCAGTGGTACCGCACCATCCGGCTCCCCAACCACCGCGACTCGCTCCCGATCACCCGAATTCACGCCACCGGAGTCATCACCGACGCGGACACCTACAACGAAACGAAGCAAGACGCCCGCAACCTAGGCAAAGGGAAGTCGTACGGCGCAGGGCTCATCGTCGAAGACAACGAACTAAATGAAAATCGACCATAGTGTCGGCATCGGCGCAGGTCAGGAAGT # Right flank : CCTGCACTGCTGGTGGCGAAAATGCGCATGGTCAGCTTTCATGGGGTCAGGAGGATCAGCAGGCGCCACATGAGACAAGGCCTGACAATGCCTCCATCAAGTCCTCGTACCACCCGAACTAGGTCATCCGACAGCAGTCGCGAGCTGCGCACCGGATCGCCAGCCCCTGAAGAACACGGCCAGCGGCCGGGCGATCGGGACATGTTCTCGCAGAACCGCTCTGAAGCACTCGATTTCGATGCGGTCTTCGCCCTCGCTCGCCCCGCTGGCCATGCCATGAGTATCCCGTTCGCATTCCCGGGCCCGACCAACTCGCCGCTTAGCGGATTGCACTGTGCAGGCGCGACGATCGATGATCACGGCCGTCTGTCGAATCGGTCCACCGTGCGGGCCCTCGGATGGGAGCCGGGTCAGCATGTTGTGTTCGGAGGCGACCATCGGATGATCGTGGTGGGGTGCGCTCGGCGGAGCCGGTGGTCGGTCTCGCGGAGCGGCTATCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCGCGCACGCGGGGGTCGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //