Array 1 1310-2375 **** Predicted by CRISPRDetect 2.4 *** >NZ_VETH01000072.1 Escherichia coli strain KCJK8767 NODE_72_length_19370_cov_5.592995, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1310 29 100.0 32 ............................. TGTCGGACACCATAATGATACTAAGTGTCGGA 1371 29 100.0 32 ............................. ATCGGTAACTACGGCACAAAACAGGAGCACAG 1432 29 100.0 32 ............................. TTTTGTGATTCAGTAATCGTTTGAGTATGTAC 1493 29 100.0 32 ............................. CGAATCCCAGCCTTGAAATTTTGGCTCATGGA 1554 29 100.0 32 ............................. CGCTGACGCAGTAAAAAGCGGGGCGTGATTCG 1615 29 100.0 32 ............................. AGTGCCAGCGCCGCGCACGCCTGATCATATGT 1676 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 1737 29 100.0 32 ............................. GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT 1798 29 96.6 32 ............................T GTGTTTGCGGCATTAACGCTCACCAGCATTTC 1859 29 100.0 32 ............................. ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA 1920 29 100.0 32 ............................. AGCAGATACACGGCTTTGTATTCCGTGCGCCC 1981 29 100.0 32 ............................. AATAAATAATAATCCAGTAGCCCCATGTATTA 2042 29 100.0 32 ............................. GTAATAAAAAATATTCTATTTCTGCTGAATCA 2103 29 100.0 32 ............................. CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC 2164 29 100.0 32 ............................. CGATAACCGCGTCAGTATTGGACAGGATATCA 2225 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 2286 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 2347 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGATTAGA # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //