Array 1 80327-80622 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQRB01000036.1 Anaerostipes hadrus strain MCC006 NODE_53_length_81127_cov_64.319031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 80327 30 93.3 36 C.....G....................... CAAGCTTTCAAGAACTAAATCTAATAAACTTAACTG ATA [80340] 80396 30 100.0 34 .............................. CACTTAGGAAACTACAGGACAGCCTGATTCCAAT 80460 30 100.0 35 .............................. AAATAAGAATTTATCGAACAGATCTGTTTTGACAG 80525 30 100.0 38 .............................. TGGCGGAACTGTATAATGTTTAGAAAGGGGTGTAGATA 80593 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCAAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCCCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATTGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAATTGAACAACTACTCAACTATTATTATACTTATTTTTAAATTTATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTCCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCAGGGGTCGACAGAAACCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACAGCTATTTTTAGGCTTATTTTATTTATTTTGCTTTACTGGCTCACCCGTAAACGGGGCAATATACTCTTTTAATGTCATCTGATCATACTCTAAATCATTT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 5505-4404 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQRB01000007.1 Anaerostipes hadrus strain MCC006 NODE_7_length_41492_cov_69.848503, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 5504 32 100.0 35 ................................ ACTGTTTGTTATTGTTATAAATCCCTGTCTTTCCC 5437 32 100.0 35 ................................ AATAATAATAGGTTTTATATCTACAACATCGTAAA 5370 32 100.0 35 ................................ TCTTGTACACTAGATACAAATTCCTGCGATGGTAC 5303 32 100.0 36 ................................ TTATTATTGTAGTTATTAATGTTAGAATAATTTACA 5235 32 100.0 34 ................................ TGTTGTGATTAACATTGTAGCGTGTGCCTGGTAT 5169 32 100.0 33 ................................ TATGTAAAGAGTGTAGATGGAATGGGCAGTGCA 5104 32 100.0 34 ................................ GACTTGTCAATTTCAGAATCATACTGAGAAAGAT 5038 32 100.0 33 ................................ CGATCAGATCAAGATCCGGAAAGGGAAAGACAT 4973 32 100.0 36 ................................ CCTTGATCATGTGTCTATGCTTATCTGTTTCATACA 4905 32 100.0 37 ................................ TTTGTCATTCACGAATCGTCTTACTTTGTATCCGTCC 4836 32 100.0 35 ................................ AATCCGTCAACAATACTTCCGTTTGAAACGGATGT 4769 32 96.9 35 ......................A......... AATTAATAAAATTGGAGATGAACTTTTCGGTAAAA 4702 32 100.0 35 ................................ CCCATTCCTGGCGAATTTATACTCTGTAACTAATA 4635 32 100.0 34 ................................ TAAGGATACAAATTTAGGAAGTGATATAAATACG 4569 32 100.0 36 ................................ AAAAAAGTAAAAAAAATAATGTTAAATTAGCATTTG 4501 32 100.0 34 ................................ AATTTTAAGATATAATCCGACCAATTCCCCACTT 4435 32 75.0 0 ....A.........AA..A..CA....C..T. | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 98.3 35 GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Left flank : ATCCAGCATTTTTGTGGAAATGAGGTGATAAAATCAAATGTTAGTATTAATTACCTATGATGTAAATACAGAAACAGCAGCGGGGAAAAAGAGACTGAGAAAAGTGGCAAAGCAATGTGAAAATTATGGAAGGCGAGTACAAAATTCTGTATTTGAATGCATTGTTGATAATGCACAGTGTGTGATGCTAAAAGCACTCTTAAATGATATCATAGATGAAAATGTGGATAGCTTGCGTTTATATTATTTAGGGAATAAATATCAGACTAAAGTAGAACATTTTGGTGTAGACAGAGGAACACAAGTTGATCAGCCATTGATTTTATAGTGATGCGAGGATATAGCAAACATAAAAAGAGTGGGAGATTCGCACTTAAAATATGAAGTAAAAAATAAATTTGTATCTAACAATAAATAGTATTTGAATGATTTGTAGATATAAGATAAAATTTATTAGTGATATTGAACAAAAAATTAGAAAATTATTGGTTAATATTGCA # Right flank : ATATTTTACTTGGTGTGGGTTATATTAATATTTATAAATTGTCATCAATATTGTAGTAACGATAAGCGGATATACATACAATGGAAGCACAAGAAAGGAAGAAATCAATGAAACGATGTAAAATTACCGCAGTACGGAAAACAGAATATAAAGATCTAATGGAAAAGTATGAAAATCCAATCCAGCATGCCTGCGATATAGAAGAAGGACAAGTGTTTATCACAGAAGGATGGAAACGACCAGAAGGATTTTGTGAAAGTGCATGGGAGAGTATTTCACCATTTGTTATGACATTAGCATATGGAGGCAGTGATATTTATGAAGGCTGGATGAAAAACAAAAACTCAGCGATGATCAGTTGCAATGACGGGTTTAGACCGGTAAGTTTTTACATTGAAGTGTTAGACGATAAAATATATTGACGAGGAGATATGACAGCGCTGGTTTATTCGGAACATCCATATTACGACAGGAAAGAGATCAGCATTGAAGATCTAAAA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 273852-275181 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQRB01000008.1 Anaerostipes hadrus strain MCC006 NODE_8_length_308598_cov_62.981976, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 273852 30 100.0 33 .............................. AACAAAAATAGATCATGGCAGTATTCCAAATAT 273915 30 100.0 34 .............................. ACTATACCGTCATTTCCAGATGCATTGACGCTGA 273979 30 100.0 34 .............................. CTGTTTTTTTCTTTGGTATGTTGTCTGATATGTC 274043 30 100.0 35 .............................. ATCGTTAAAAACTTTCGATTCCCTGTCAGAACTGG 274108 30 100.0 36 .............................. TGCCTAAGCACACTTTTTTGAACCGATTCAATGTTA 274174 30 100.0 36 .............................. CGATTTCACAATCATGAATGAGATAGTCAACAACCT 274240 30 100.0 36 .............................. ACAGAACGATGTTAATTTGGTTATGAAAAGTATGTT 274306 30 100.0 35 .............................. ATAAAATATGTTATACCTTCATATTCTACAACTCC 274371 30 100.0 35 .............................. ATTTTTAACATCTCTTGAAACATTTTATAGTTTTC 274436 30 100.0 36 .............................. TGGTTATTGACAAATGGGTTTAAATGGGAAAAGAAG 274502 30 100.0 36 .............................. CGAGAAACGAAATAAATTTTTCGTGAGGAAGTACAT 274568 30 100.0 36 .............................. TTTGTTCAACAAAAGTTGAACTTGCTTTTCTCTCAG 274634 30 100.0 35 .............................. ACAAGAACTGGTATTTGCGGAAAATTACCAAAAAT 274699 30 100.0 35 .............................. TACTTCACAGTCTGGAAGTACAAATAAGAAAAAGA 274764 30 100.0 34 .............................. AGATATGCAGTGTTTGAACCAAAGGATGGAATCA 274828 30 100.0 35 .............................. ATAAAAGAGTTGGCGGCGATTATGGCGTAGAATTG 274893 30 100.0 36 .............................. ATAAAAATGGGGGTGTAGGGGATTGTTCTTCTTTTA 274959 30 100.0 34 .............................. CGTATCCTTCTTTCTGTCCGGCCACGTATCCTAC 275023 30 96.7 34 ........A..................... TCCGGCTGGAGATGTCCAGACGTATGGAGTTCCG 275087 30 96.7 35 ........A..................... TATTACAGAATCAGATTTCTTTTTGAAGAGGATTT 275152 30 96.7 0 ........A..................... | ========== ====== ====== ====== ============================== ==================================== ================== 21 30 99.5 35 GTTAAACAGTAACATGAGATGTTTTGAAAT # Left flank : GATGATAATAGCTGGAGCATGGATATTGTTTTGTGTCGTAGACTTCAATTAGAGGATGGAACTGTTTTAGATGGCGAAGAAGTTTGGAATGAATACAAAAATATATTGGAAGATTTAGATATGGAATATGCAAAAAAGCAGATAATGCTTTCGGTTGCTCGAAGCAATCTTAAATATTTTACATACAGAATCAAAAAAAATTCAGAGTTAATATATAATGATATTTTAGGAGAACTTCGATGTATCTATGATGGAGAACAATATTTTGAAAATGGAAAGTTAAACAGAAAGTTGTTTGAACAATCAGGAGGATTATTTATTGACATTTAAAAGTATAAGATTTTACCAAGTGATTTCCAGAAAAAGTGTTAGAAATGGCTGAAATATGTACTTTTTTTGAAAAACAGTAAATTAAGGGTGCACTTGGGAAAAACAATGGAAAGCACATAAAATCGTTGTTTTTTTAAAAAAGACAATTAAAAAATGGCGTAAAATCGTTG # Right flank : TACCTCTAAGGTCGGGGATGAATTCGCTCTCGCCATTAGTTAAACAATAAAATAAATTTATAAGCACATTTGATTAATTTCTAATTTTAAGGAGGAGTCTATGAGAGTTAATGGAACATTAATCAATTATTATTTACATTGTAAAAGACAGTGTTATTTACATGGAAATAGGTTGAATCTTGAAGATAATAGTGAAATCGTACAAATTGGAAAGGCAATTCATGAAGAACGATTACAAAGTTCGAACAGTGAAATAGCAATTGAAAATATTAAATTAGATAAATTAACAAAAGAGTATTTAACAGAGGTAAAAAAATCAGATGCTGATGTAGAAGCAGCAAAATGGCAATTATTATATTACCTAAGTGTTTTAAAAAATAAAGGAATTTATCGAAAAGGGAAACTAGAATTTGTTGAAAAAAACAAATCTAATAAAAAAGTAGTAATTTTGGAATTAACAGAGGAGAGGGAGAATGAATTAAAAAAAATTATTGAATCAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAGTAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //