Array 1 46917-44967 **** Predicted by CRISPRDetect 2.4 *** >NZ_FEVA01000014.1 Neisseria meningitidis strain 2842STDY5881229, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 46916 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 46850 36 100.0 30 .................................... TCAGGGCTATCGGGGCTGACCGGTTTATTG 46784 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 46718 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 46652 36 100.0 30 .................................... TCCATGTGAACTCGTTGGCGCGTTCGATGA 46586 36 100.0 30 .................................... TAAACCTCTGTCGGTTGGTTTGCTTAGATT 46520 36 100.0 30 .................................... CGAATTGGAAAAGTTGCCCTACCGGTGGGG 46454 36 100.0 30 .................................... GTCGCATGGTAAAATAACCACCGCTTTACA 46388 36 100.0 30 .................................... AAACTAAAACTTTGGAAAGTTGGAAAGTTG 46322 36 100.0 30 .................................... CGGCGCATCCCCTTTAATTTAATATCACTT 46256 36 97.2 30 ............A....................... ATAGAACCTATGGCTGCTACGGCGTTGACA 46190 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 46124 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 46058 36 100.0 30 .................................... AAACGCCGGTAGGTTTCGTCTGTCTCCATA 45992 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 45926 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 45860 36 100.0 30 .................................... CATCAAATCATCCGCCGCGATTCGATCGCA 45794 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 45728 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 45662 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 45596 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 45530 36 100.0 30 .................................... ACCAAGATATATCAAAATTGTAGATGAAAA 45464 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 45398 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 45332 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 45266 36 100.0 30 .................................... AGTCAATGAATCACTAAAAGCCAAGTCAGA 45200 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTCCTTTACA 45134 36 100.0 30 .................................... TTTTTCGATTTTTTATATTGAGCGTTTTTG 45068 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 45002 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //