Array 1 121008-123134 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000011.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_163, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 121008 29 100.0 38 ............................. CTTTGATATGTGTATTTACTATGTACAAATTTATAAAA 121075 29 100.0 37 ............................. AAGAGTCTTTAAAAAAAGAAATAAAGAGTTTTCTAAA 121141 29 100.0 36 ............................. TAAGATAGAAAAAGCAATAAGAGATAAGTATTCAAC 121206 29 100.0 36 ............................. AATAAGATAGTGAATAATAAGGTTGATGGAAAACAT 121271 29 100.0 36 ............................. ACTTTTTTATTATTATTTATAACTTATATGAGCTTC 121336 29 100.0 35 ............................. AAAGAAGTACAAAAGAAGCTTGAAACAATGTACAA 121400 29 100.0 37 ............................. TTTCAAAAGAGAATAAAAAAAGCTCATGAGTTCTTTC 121466 29 100.0 37 ............................. AAAACTTCTAATCTGAACTAAAATGCGAGGAGTATTA 121532 29 100.0 36 ............................. AAAGTTGAGAAATGGGAAAGATTTTTAAATAATGAA 121597 29 100.0 36 ............................. TTCTAAAAGTAATTCATGAGAACCTAATTCTATATC 121662 29 100.0 37 ............................. TTTATTTCAAAAGTCAAGAACAAATACAACTTTTTAG 121728 29 100.0 37 ............................. TTTTATAATCATTCATTTTTTTCCCATCTAGTAATAG 121794 29 100.0 37 ............................. TCTAGGTAAAAATCATAAGCCATTTATATCCCTCCTC 121860 29 100.0 36 ............................. GATACGGAAGAATGTTTATATGTTGGGAAAACAGAA 121925 29 100.0 38 ............................. CAATTATTGGGGGCATGATTTTGCTACTGAGATAACTA 121992 29 100.0 36 ............................. CTGTCTTTATCAAAGTATGCTAAATTTAACTCCTCC 122057 29 100.0 36 ............................. AAGTAATGATACCATTCAATTTCAATTTTATGAAAA 122122 29 100.0 38 ............................. TATCTTTTTCTTCTATCTCTCTGCTTTTCTTTTCTATT 122189 29 100.0 37 ............................. ATGATATGGTTCTCTAATATATGTTTGTCCATATAAC 122255 29 100.0 36 ............................. GTACTTTTGTCTTGTTGAACATTATTTTTAGCTTCA 122320 29 100.0 36 ............................. TTAGAATAAAAACTATCATATCTTTTAATGTATATC 122385 29 100.0 36 ............................. ATTGTAGTTGAAGAACAAGTTTGTGGTTATATATGT 122450 29 100.0 37 ............................. GAAGTAAAAGTAAAAAATGCAGATAAAAGTAAAAAAG 122516 29 100.0 37 ............................. TATTAAAACTACATTTACTATCTTATAAAATATTTTC 122582 29 100.0 36 ............................. GTCTATAAAACGATAATAAACTATAATCATAAAAAT 122647 29 100.0 37 ............................. TCTTGTAACACTTTAACACTAGCGTCAGGTTCATTAA 122713 29 100.0 37 ............................. CCAAAATTTTTAGTTACTTCTTTTACTAATATATTTA 122779 29 100.0 36 ............................. GTCTGTAGCATTTAATGAAACAACTTCTTTTATTGT 122844 29 100.0 37 ............................. TCTTTTAACATACTTAATTCTTTTTCTAATGCTTCTA 122910 29 100.0 37 ............................. TCATTTAAATTATTAGTTGATGAAATATTTGCGCTAG 122976 29 96.6 35 .......................A..... GCAAGAGGTAAATTAAAATTAGGACTTTTAGAAGG 123040 29 96.6 37 ....................G........ AAGAGTTCTTTTTTCTGAATAATTCATATTATAATAA 123106 29 79.3 0 ...C............A.AA...C....T | ========== ====== ====== ====== ============================= ====================================== ================== 33 29 99.2 37 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : ATTTTATCAATGATGAAAAGTATAAAGTCTTAAAGGCATGGTGGTAAAGAATGTTTGTTATTGTTACTTATGATGTTGTTGAAGCAAGGTCATTAAATCGGATTAGAAAAATACTTAGAAAATATTTGACTTGGACTCAGAATTCTGTTTTTGAAGGAGATATTACCGATGGAAAGTTACATAAATGTATTTCTGAAATAGAAAATATTATTGATAATAGTGAAGATTCAATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATGGTATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGCATGTGATAACTATTATCAATTGCACTACTGATCGCTCACTGCAATTTTTAATATTTTTATTGAATTATAACTGCTTGAGTGTAGTATTTTCAATGTATTCAATTAGACATATTTTGGG # Right flank : TAAAACATAAATATTCTATAAATCTTGATAAGAAAGTAGTAAAAAATGAGGTGAAATAAAATTTATGATAAGAAAATCAAATAACAAAGATATAGAAAAAATAATGGAAATCTGGGAAGAAAGTACAATCAAAGCACATGATTTTATAAATAAAGATTATTGGAAAAATAGCTACAATACTGTTAAAAACGAATATATGCCTATATCTGAAACTTTTGTATATGATGATGGAGAAGAAATAAAAGGATTTATAAGTATTATAGATAATGAATTTATAGGAGCTTTGTTTATAAGTACAAATTATCAAAGTCTAGGAATAGGAAGCAAACTTTTAGATTATGCAATTAAAGAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTATTTTACAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAATATCTAATGGAATATAGTAAACAGCTTTAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14434-14209 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000001.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 14433 29 100.0 37 ............................. GTGTAAGTGGTAAGGAAAATGTAACAAGTGTTAAACA 14367 29 100.0 36 ............................. TTTATTTTACTTGTAATTCCTCCAAGTATACCACTT 14302 29 100.0 36 ............................. ATTGCTGCGACTACCGCTCCAACGCTTACAACAATT 14237 29 79.3 0 A..............T.....C.AA...T | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 94.8 37 GTATTATATTAACTAAGTGGTATGTAAAG # Left flank : GGAGGTACAAAGTCATTAGAAAACTTTCATCAAGAGCCCACAGATATTGAGGATTCTAAATCAAGTGATAATGTACAACAAGATGCCTAGTGAGATATTAAGAATTAAAGATGAATATACTTCTTTTTGTTTTGATGAAGCCTGTATGTTTTTAGTAGATGCTATAAAAAATGATAAAAAGCTTAAATTTGAAAATGATGAAAAGAAAACTATAGATAAAAATGAGAGAAAAACTTTTGTCCAAATAGCATTAGAGAAAAAGAAAAAAGTTAATAGGTAAAATATTCTAAATGAATAGAGTGAATTAATGTTAATTTATGATATAATGATAATATGGATATTTTGCAGTGTTCAATTTCTTGTATACATTGGATGTAATCATTGAAATTACTATGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTTACTCATTGTAATTTTAATATGCTTTTACATGTGTAAGGATTGGAAATGCTCAATTTATTTTGGG # Right flank : TGAATAAACGCACAAAACACCTACTTAAACATATAGGTGTTTTTAGTTCGTTTAAAATATTTTTAAGTAATTGGATAAATTTACTAAATCAATAGACTAAATTATTAATTTTAGATAGAATTATATTTGAATAAATAATTTAATGAGGGAGATTATATTATGAAATTAACAAAAAAAGTATTAGTTTTGAGCATAATAGCATGTTTTTCTGTAATGATGTTTGTGACAGGATGTACTAGTTCACCAGCATCTAAAATGGAGGAAGTTGGTCAAGAAATACCAAAAGAAGAGGAAGAGATACCAGAAGAAAGCATAGATAAAGATAAATTAAATCCAGATGAATTTTTGGATTATCAGATGAATGAATTTAAAAAGAGTTGGAAGACGCTACAGGGAATAGAGAAAAGTGCAAAAGAAGGAGAAATAACTAGTGATAACTTAAAAACGGGGGCTGATTTATACGAAAAACGTTTTGGGACTTTATACAAAGAAACTCAAAA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 16619-16780 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000020.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_172, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 16619 29 100.0 37 ............................. AATTGTGATGGAGAACAACTTCAGAGTGTTATAAAAA 16685 29 100.0 38 ............................. AGGATATAATTTTTTATCATCAATAAATTCCTTTTATC 16752 29 79.3 0 G...................A.AAC.G.. | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 93.1 38 CTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : TAAATAAACAAGATAATATTATCGAAATTTTTACTAACGAAAACTCTTATTGTATATATCTAAAAGCTTTAAGCATTGAAAGTGAAGAATATCTAATAAGTAGACTAAAATCATTTTTTTGATTGTATATATTTTATAAGTAGAAAACAGAGTAGTTAAAACTACTCTGTTTTTGCAATTAAAATTTAAAAATGCATTATAGCTAAAGTGTATATATACGTTATAAAATAACTTATAAATAAAATTATTGATAATGTTTTAAAAAGTTGTTTTCTATATCTAATTTAATTATCAAACTGAGATTCTTATTAGATAAATTATGTTATAATAAATGTATAAATATGCAGTGTTCGATATTTTGAAAATAAAAACTGTAATGCTTGTAAACACTGCGTTACAAGGTGTTTTTGGAAAATATCAAAAAGCACTACTTGTGGCTCACTGCAAATTTATATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGC # Right flank : GTGGTTTTAAACTACTCTGTTTTTATATAAAGTAAAAATAGAAATATAAATTAAGAAAGAAGTGTACATATAATTTATAAAATAAATTAAATAATAACTTTTATAAAATGTATATATAAATTTAAATAATTTTGGTTCTCTATACTCAGTTTATTTAATAAACGAAAATTTTTATTAGATAAATTATGTTATAATAAATATATAAATATGCAGTGTGCAATATTTTAAAAATAAACACTGTAATGCTTGTAAATACTGAGTTACAAGGCGCTTTTGGAAAATATCAAAAAACACTACCTTGCGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCCCAATTTATTTCGGAGTTTTATATTAACTAAGTGGTATGTAAATAGTTCATCACGTAATATTTTCAAAGTGGTTTTTTCTGTTTTATATTAACTAAGTGGCAAGCAGAGTAATTTTTAATTGCTCTGTTTTTTATTTACAAATTTAAGA # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 5816-5397 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000004.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_156, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 5815 29 100.0 36 ............................. TGACACATATTGCTAGCAATTCTGATGCTTCAGAAC 5750 29 96.6 35 ................C............ TTACAATATTCCAAGCTGCTGCGAATACATCATAG 5686 29 100.0 37 ............................. AGAAAATAGAAAGCTCCCACAATTACTCCAGTTGCAG 5620 29 96.6 36 ............................G GCTGGAATTAATGCGACTACAGTAGAAGAAAAGAAA 5555 29 89.7 36 A..............A............G GTTCTAAAAACATTTGCTATTCCAACTACACAAATA 5490 29 89.7 37 A............A..............G CGTATTGCTATGTTTGCTCCATCTATGAATGCTTTCC 5424 28 86.2 0 A...................-..T....A | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 94.1 36 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : CAATCAAAGGAGACAAGAAAAACTACTATATATTGTATAAAAATAATTAGATTTTAGTTTAGTTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATGAAGATGTAGAATACTTTGTGAAGTTTGCTAATGCGTTATATGAACTAAAACAGAATAGTGAAGAAAAATTTCAAGAATATGTAGAGATATTGAGAGAAATACTTAGAGAGCAAGAAGAGAGAGAAAATAAGTAAAATAATATAGATAAAGCACTTGGATATTTCACTGTTTCAAGTGCTTTATTTGGTATAAAATGGTATAATAGAGATAAAAGTTTTGCAGTGTTTGATTTTTATGTTTAAGTATGGTTTAACAATTGGAACACAAGGTATTGAGAGTATACGATAAGTGTTATCAATTGCACTATTAGCCGCTCACTGCAAATTTAAGAGAGTTGTATATGTGTAAGTATTGAAAATGCTAAGTTTATTTTGG # Right flank : TTAAAAATAATAAAAAACACTTACTTGAATAGTAGGTGTTTTTTAATTGAAAGGATGTGATTATAATGTAAAAATTTTACTTATATAGTATAATATTGCTATAAATTCATTATAATAAAGGGGGATATTATGGGATTATTTAGTGGAAATGAAAGTTGCTGTATATGTGGAGAAAAAGGTAAACAAAAAATATCTGATGGTGTAATATGTTCTGAATGTTTAAAAAAATATAAAGATACATTTTCTATAGTTGAACCAACAGATGTAATTAAAAAAATATCTTCTGAGGAAATAAAAAAATCAATAAGATTAACACTCGAAAATAAAAAACAATTTGAATCTTTTAATGCAAGTAAAAAAGTAGGAATTTATTTATTAGTAGATGAAAATAAAAAACAATTAATTATGTCTGATAAAATAAGCAATTTAAATAAGAATAAGAGAGTATATGACTTTAGGGATATTATTTCATTTGAACTTTTAGAAGATGATGAATCTAT # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 8874-7537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000004.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_156, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 8873 29 100.0 35 ............................. TCTAATCTATCTAAAACAATTACATATACTACTTT 8809 29 100.0 38 ............................. ACATCAATAGTCTCGTGTTTCACGACCCCCTTTAACAG 8742 29 100.0 37 ............................. AGACTCAGAAACAATATCTCCATAAAAATATAACTCA 8676 29 100.0 37 ............................. GATAAAAGATTCGACAGACCTTTAGACTTAGATACTT 8610 29 100.0 38 ............................. AATTTTTACATAATTAAATTATAAAGAAGTCATGACTA 8543 29 100.0 35 ............................. TTTAAGGGAAACATTTAGAGGAGGAACTAAAATGA 8479 29 100.0 36 ............................. ATAGAACCCCATCTGTCAAAACCTATCTCTTGAGTT 8414 29 100.0 36 ............................. TATCTACGTCTAAGTCTCTTATTAATGTGTGACCGA 8349 29 93.1 37 ...............A............T ATACGACTCACTATTTGTGCAGTATCTAAGTAAGATG 8283 29 100.0 36 ............................. AACATCATCAAAAGCATTGCGGATTATCTTGATGTC 8218 29 93.1 36 ...............A............T TAAAAAAATCCATTACGAAAAAACTTATTAAAAAGT 8153 29 96.6 36 ............................T TTGGTGAAGCTGTCTTGCCTCTTTTAAACGAATTTG 8088 29 96.6 36 ............................T ATTAGTAAAATTACTATTACAACAACTACTATGTTA 8023 29 96.6 36 ............................T ATAAGAGTAGTTTTAAGAGTAGTTTAAAAAAATAAT 7958 29 100.0 37 ............................. TACACTAATACCCCAAGACATTATTTTCCCTAATGCA 7892 29 100.0 36 ............................. TATCCAGATCCACCATTATAACATGCAAAGGAACGT 7827 29 96.6 37 A............................ AGAGAAGGACTTTAGAAAATTGCATAATACAGGTGAA 7761 29 86.2 37 ......G.........A...A.......T TGTGATTGGTCTGTAAAGAAAGTTACAAGATTGTTAG 7695 29 86.2 37 ......G.........A...A.......T AAAGGCAGTAGAATAACTATAAGATTGGATGAAGAAT 7629 29 93.1 37 ...............A............T TAAAACATTCTTTGCTAGTTCTAAGTCATTGTCTGTT 7563 27 82.8 0 .............A......-.-.A...A | ========== ====== ====== ====== ============================= ====================================== ================== 21 29 96.2 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : ATGTAGTTTATAAAATTGAGTAAATTCTATTGTATTAAATAATTTAGTTTAGTTTATTTTAGTTTTGAGGGGGATTAATACAATGATTGAAGATTTACTTAATGAATATAATATAAAGGATGATAAAGAGAGAGAAAAGTTTATAAAGTTTGCTAATTTACTATATGAACTACAAAAGAATAATAAAGAAAAGTTTCAAGAATTAACTAATATAATAAATAAACTTTATGAGAAAAAATTAGAGAAAAATAATGATTAAATAGACATATAAAGCACTTGAATATTTCACTGTTTCAAGTGCTTTATGTAGTAAAAAATGATATAATATAGGTAAGAGTTTTGCAGTGTTCGATTTTTCTACTCAAGTATAGTTTAACAATTGGAATACAAGGCATTGAGAAGGTTTGATAAGTGTTATCAATTGCACTATTGGTCGCTCACTGCAAATTTAAGAAAGTTATATATGTGTAAGTGTTGGAAATACTCAATTTATTTTGAGG # Right flank : CTAAATAAACAAAGAAGCACTTACTTAAATAGTAGGTGCTTTTGTTATTCTTTGCTAGATAAAGTAACAAGTTCGTTAGGTGTACATTCAAGAACAAGACAAAGCTTTTCGAATAAATCTAATTTTATAGAACTTGTTTCATTGTTAGCTAATTTCATCATGTTAGGATAAGCTATACCTACTTCTTTAGCTAACCAATATCTAGTTTTGCCTCTTGATTCAAGCAATTTATCAATATTAAAATACATTTTTTCACCTCTTAAATATATTATACATTGATTATATAATGTTTGCAATATATAATATGCAAATAATATAATTATATAATGTTGACATTATATAGTGTGTACGATATAATATACTTAAGGAATAAAAAATAAGAGCCACTCGCCCCTACCAAGTTTGAGTAACTCTTATTGACATATACTACATATGCATTAATTATAGTATATGCCATTCCTTAAAAAAAATCAATTAAGGAGTGTGTTTTTATGAACAAT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 39885-39059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDA010000004.1 Clostridioides sp. ZZV14-6150 ZZV14-6150_156, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 39884 29 100.0 37 ............................. AAAAATTTAAAAGTCTAAATACATCCTCTATATCTTT 39818 29 100.0 38 ............................. GTTATAGCAGAAATGGTAATTGGTCTAGATGAGTCTGG 39751 29 100.0 39 ............................. TTTAGAATATTTTCATTATCTATATCATTTAATTCAAAG 39683 29 100.0 37 ............................. AGAAATTAAAAAAAGATAAAGTAATCTAGTTTAATTA 39617 29 100.0 37 ............................. TAATGAAGTACAACAGAAGATGTGGTGCGACAATAGA 39551 29 100.0 37 ............................. CAGCAGATATAGAACTAGAAGATTTAGGAACATCAGA 39485 29 100.0 37 ............................. AATTTTAAAAATTTTAAAAATATTTATACTAATATAA 39419 29 100.0 37 ............................. TTTATCAAATCATTAGATAAAAATAATTTGGAGGAGG 39353 29 96.6 38 A............................ AAATACTTAATTTAAAGCAAGTACCATGTTTAGTGCTA 39286 29 100.0 37 ............................. TGTTTGGATGCAGAAAACATACTTGATTATGTTCAAG 39220 29 100.0 37 ............................. TTTTTAGTAGGATGTTTAAATTGGTGGTGGTCACCAA 39154 29 96.6 37 ............................T GTAAATTTATTTGCTAGAAAGTCACAACTTAATTTCG 39088 29 86.2 0 ...............A......AT.T... | G [39067] ========== ====== ====== ====== ============================= ======================================= ================== 13 29 98.4 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : CTTACCTTTAAATATACTAATAATAAGATTAAATATAATAAATCCAACCGTTGAGCCCAAAGCACTAACAGGTACTGATGATATATTAGAGAAATTATTCAATGCTGATAGACATAACATTACTATAGAAACTATAACTAAATAAGATATGACTGTAAAAAATGGAATTGAAATACTTATATTTAACTCTGCTTCATATTCTTTCATAATATAATTCCTTTCAAATTAATTTTATTTAACTTTATTATAGCATTTAAACATAATTAAATGTAAAAATACAGTCAGAAATTAACTAAAAATATCAATTATATGTTATGATATAATAAAAATATAAATAGTTTTGCAGTGCGCGGTATTTTTGATAAAGTGTGGCTTAACAGTTGAAATATAAGGCATTGAGAACATATGATAAGTGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGTTGTATATATGTAAGTATTGAAAATACTTAGTTTATTTTGGG # Right flank : AAGTTACAATGAGTAGAAGAAGATTTCTATTTATTGTAACTTTTTTATTGCAAATTTAAAATTATAATATATTATAAAAATCATTATAAAAAGATGATTTAATAAAAAAATATAATTAAAAACTTGATTAATAATATATTAAATTGTAAGAAATATCCAACTGTCTACAAAATCTGAGTTTTTTATTACAATTACGAGTTTTTTATTGCATTTGAAAAATAAAAGTATTATTATAAAGGTAAGATAATTATCAAAGACAATTCTGAATAATCTAAAAACATTTCTAGAAATGAAAGGGTATAATTACATAAGTTTTATTAAAATTTATTGGGAGTTTTTAACTAAAAATAAGAACGTAAGTTCTTGTAACAGGGGGATAGTAATATGGAAAATGAAAAAGACAAACTCATCTTATCTTTAATTGAGTTGAAAATAAAGGATGAAGAAGATTATGAACTCTTTGCAAAAATGATTAAAGAAATTTATGAAAAAAATATAAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //