Array 1 83623-82929 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLOE01000019.1 Marinomonas spartinae strain CECT 8887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 83622 28 100.0 32 ............................ GTCATGGGACACGCGTAAAAACTTGTTACCGT 83562 28 100.0 32 ............................ TCCAACAGAAACTATATACACAGCGTCACCGT 83502 28 100.0 32 ............................ ATTTTTATACGAGCCAGCTCAAAAAGGCTTAC 83442 28 100.0 32 ............................ GCATTTTTAGGCTTTCTGTCTCGCCACTTTTG 83382 28 100.0 32 ............................ CCTCCGCAATATCGCTAACAATATCAGTAGAT 83322 28 100.0 38 ............................ TCATCATCATGAACATCAACATCAACAACAACACGACT 83256 28 100.0 32 ............................ TTATATTGAATCAAGAATTCAGTCAGTGACAT 83196 28 92.9 32 ....A.......A............... AGTAGTGGTATCATTGAACATTCGAATGTAGT 83136 28 92.9 32 ....A.......A............... ATGTAAGCCAATACAAACTTGGCATGAGTTAA 83076 28 92.9 32 ....A.......A............... TAAGCTATCAGCACCTACCTCATGACTTTCTC 83016 28 100.0 32 ............................ GTCAGGGAAGCTGCTAGACTCTCTATTTGAAA 82956 28 96.4 0 .....................A...... | ========== ====== ====== ====== ============================ ====================================== ================== 12 28 97.9 33 GTTCGCCGCCGAGCACGCGGCTTAGAAA # Left flank : GCGAATGAACCTTGGAAAGTGGCTAAATCGACTTGAAGACTATGTACATATAAAAAGTATCACCGATGTGCCAAATGAGGTGCTGGGTTATGAGTCCTTTAATCGTCGCCGAAAGTCTGGCTCACCAGATAAACACATTAAGCGACGTATGCAGCGCCACAATGAGACACGAGAGCAAGCACAAAAATACTTTGAAAGCTATCAAATGCTCAAGGAAGACAAAGAGCTCCCTTTTATTAGAATGAAAAGCCTACACAGTGATAATGCATTTCGTATGAGTATTGTCCGTAAAGAAGCCACTTCATCGAACAGCAGTGTTATGTTCAATACCTATGGGCTCAGCGCAGACGGTGTTTTACCTAAGTTTTAACCAATAAAATTCGCTCTTTAAAAATTTTATTAAAAAACAATGAGTTGCAATATGCAGGAAAAACAATGGTAAAAAAACTGATTTTTATCTAACTATATGTTGTAACGTGTTTTTTTTCGATTAGACTATA # Right flank : TACAAGTAGTAGTAAAAGTTACAACTCTGAATTTCACCGTCGAACAGGAAGGTTGCCAACAATAGATTTCCGCCTTCGCGCACTACTGTCCGGAATAACGGGTGGATGAGGGAATGACGGATGAGTGTGGATATAGTGGGGTAGTGAGTTGAGGAAATTGGAAATGATTAGATACGCTACTTGGAATCATTAGGTGTTTGTTTATAGGGTGGCCATGTCGAGAGATCGATAAGAGTCGATCAGTACATCCAGCATAGCGGCGGCGGCAACGGAGAGGTGGGATCTGGGTTTGCAGACGACGCCAACTTGCCAGCGGATATCGGGGGTGGTGATAGGGCGACAGATGGCCCCTTGTTCGTTGGCTTGTTTGCGACAAAGGGCGGGCACGACGGCGACGCCCATGCCTTCGCTGACCATGCGTCCCACGGTGGCGAGTTGGTGGGCATCGAAGGCGATATTTATTCCACTTGCCCTTCTATCAAACGGCCCTCTTCCTCGGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCGCCGAGCACGCGGCTTAGAAA # Alternate repeat : GTTCACCGCCGAACACGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.60,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 33986-33478 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLOE01000003.1 Marinomonas spartinae strain CECT 8887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 33985 28 100.0 32 ............................ TGTACGAGAACACCATCGGCCAAGCTGCATGG 33925 28 100.0 32 ............................ TAGAAGGTGGTTTTTTATAGTCTCAATCAAAC 33865 28 100.0 32 ............................ TGCCAGATTGGAACCAGCTACAGGAGCGCCTT 33805 28 100.0 32 ............................ TTCCGCGCTTGCTTGCATAACATGAGTTCGAA 33745 28 100.0 32 ............................ AGATAAATTCGTTAGGGTGACGCCTGGCATTT 33685 28 100.0 32 ............................ TTTTGCCGACATTTCAAAGCGGCGGCTTTTCT 33625 28 100.0 32 ............................ ACGGTGTTATTGGTGTCTCGTGTAGCAAGCTA 33565 28 100.0 32 ............................ TGAGTCCGCCTATTTTGAAACTGCCAAGAATT 33505 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 CTTCACCGCCGAACAGGCGGCTTAGAAA # Left flank : CCTTTTTTGTTTTTCTTTTTCCATATATTTTCCTTAAATTTTCCAAACGCTTCCATTTTTTCTCTATGTTTTCAGTATTTTTGGCTGAATTAGCGTGTCTGTAAATTCATCGAAATTACTGTCATTATCGTTCAGTCATAAAAAAGAGCGGCTAGTTCTCTTCTTCGTCGATGAGTTTAGCTAGTCCGCCTCATTTTTGGTCAAAAAATCGGAAATCCTTCTTCTTACACAAATTCACTTGGTGATTGCCTGTGCTTAAATCTATATTGTATATATATGCAGTATTTTAGCGTTTGGTAAGCAAGTAAAGGCGAAGGTCGACAAGTGGACGGGTATTACGGTGGGCGTGGGAATTACGCCTTGGTTTTAACCCTTTTTTCTCGACCTAATGCCAAGCCCTTATAAATAGGGGCTTGGCATTTCCTGTTTAAAAAAGGGTATTTTTGCTAAAAATACACAAAGCTCTTTAACAATCAAATAGTTAATGCCAATTTTGTCTA # Right flank : TAAGACTAAAAAGCCTACTAGAAATGAATCAGCCTCAAGTTTTACTTGCAAGTGATCCGCACCTTTGACGACGACCAACTCCAAAGCTCCCCCGTATGGGTAGATGAAACCATCGAACGTGCCAAAAACACCACAGGCCGAAACTTTGGAGAAGGTTAAATAAACGTCTGAGCTAGTCTATTTTGATAGTAGGAATCACCTTGCCACTTTAATAGGATTAAAATGAGTAAGTCAATTTTGCATACAGCATCGTTTCGTCTGAAACTTGGCTGGCCAAAGAGTATCTAAATTTAACGTTCATCCCGTTAATTGAGCAGTATTTGTCCCAATTTCCTGTAATATCCATTGCCTGAATGCTTCTGCATTGGGATGGGGGGGCTTGATTGGCCTTGCAAGATAAAAGGCTTCTGAGGTTTCTATGCTGTGTTCAAAGTAAACATTATTGGGACATACATCTTAAGAAGTCAGTGCTTTCAAGACTCTTAACATATATGTCCTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 397810-394662 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLOE01000003.1 Marinomonas spartinae strain CECT 8887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 397809 27 100.0 33 ........................... TCGCGGTCTGCGCGTACGATGTGTTTATCGCCG 397749 27 100.0 33 ........................... TGGCCGTACTTCCTACCGGTGCGGGTAAAACCG 397689 27 100.0 33 ........................... GCTTGTGTCGCTCGTTAGCGCCAGCAATACACG 397629 27 100.0 34 ........................... CTCAATGTTACCAGCAACTTTACAACCTACAATG 397568 27 100.0 33 ........................... TACTACTGTAGTTGGATTTTTTCTAAATGTAGG 397508 27 100.0 33 ........................... ACCGGGACGAACGGTGCGGACACCTTGTTCGTG 397448 27 100.0 33 ........................... TGATCTTTAACAACCAAGTCTGAGTTCGGGTTG 397388 27 100.0 33 ........................... GTGATTTTTCGAATGTTGAGCACAGAGCCAACG 397328 27 100.0 33 ........................... TTTACTCTCACTACTATGAAATATGTTTGATTG 397268 27 100.0 33 ........................... GTACGAGAACACCATCGGCCAAGCTGCATGGTG 397208 27 100.0 33 ........................... TCTTACCCAAATAGACCACGAACAAAAAAGCCG 397148 27 100.0 33 ........................... TCTTGCGAAAGCCGCCGAAGCTGTGGCGGAAAG 397088 27 100.0 33 ........................... TGTGAATGATTCGAGGAGAATTAACTCTGGAAG 397028 27 100.0 33 ........................... TATCGGCGTCTCTACGACAAAGGCATCCCCTGG 396968 27 100.0 33 ........................... GTGTTGTCTGGTTTGGACGAAAGTTGGTGTAGG 396908 27 100.0 33 ........................... GAAGCCATTGAAGCGTTAATGGATCTTCGTGAG 396848 27 100.0 33 ........................... CATGGCTCGCTGGGCGGTTTTCGCTAGCTTGCG 396788 27 100.0 33 ........................... TGTGAATGATTCGAGGAGAATTAACTCTGGAAG 396728 27 100.0 34 ........................... TTGTCTATCATTAGCGTTTTTGTCAGGCTTCTTG 396667 27 100.0 33 ........................... TGCTCGGCTTCGTAGTCGGGTTCTTGATCAAGG 396607 27 100.0 33 ........................... CACGACCCGAAGCGCTGGTAAAGTTGCGTTAGG 396547 27 100.0 33 ........................... TCAAGCAATATATCTATATCAATATCATAGTTG 396487 27 100.0 33 ........................... ATTGGTGGCTTTGTCCATGATGTTGTAGTCGAG 396427 27 100.0 33 ........................... AATGGCGAAGTGTGCCAGGTCAACGTCAACGAG 396367 27 100.0 33 ........................... ATCTGCACGACCGGATAAAGTGGATCCGGATTG 396307 27 100.0 33 ........................... AATAGGGTATTTCGTTAAATCAGTCGGATCATG 396247 27 100.0 33 ........................... AGTTGTGCCGTCCCAGTCATTTTTCGCTCCAAG 396187 27 100.0 33 ........................... TCTATGTCATCAACGTCAACGGATATTTTAACG 396127 27 100.0 33 ........................... GACCCGTCGACGACCCTGTTTATAACAGTTATG 396067 27 100.0 33 ........................... AGTTGTGCCGCCCCAGTCATTTTTCGCTCCAAG 396007 27 96.3 33 .................A......... ATCATGACCCCCTACCGTGAACCGATAGACACG 395947 27 100.0 33 ........................... AAGAATTGGGCGTGTACAAAATTGGTGGTGTAG 395887 27 100.0 33 ........................... CGTCAATTTTTGCTGTTAACGTTTGAGCCAGAG 395827 27 100.0 33 ........................... GTAAATATCTACAACTGCATCCCCTGGTACAGG 395767 27 96.3 33 ..............G............ ATACGCTTGGCCGAAATCGTATCGACTAACAAC 395707 27 85.2 33 ..CA.......A..G............ AAAGTTTGGATTCTCGCGTTAATAAAAGGTAAC 395647 27 85.2 33 ..CA.......A..G............ TTGGTGATCGTGCCGTTTTCATCTAGCGCGGTC 395587 27 85.2 33 ..CA.......A..G............ GTAAGGGGAGCCGTCGTGCGTCCATGATAATGC 395527 27 85.2 33 ..CA.......A..G............ ACAAAAAGAAGTGGTTCATGCTCGCCACACTAC 395467 27 85.2 33 ..CA.......A..G............ TCAGATAACAAAAACTACCGAGATATGACCATC 395407 27 85.2 33 ..CA.......A..G............ ATTTGGCCGCTTTTCCTTTAAACATGTTATTCC 395347 27 85.2 33 ..CA.......A..G............ AATAAAAGTTAAGTAACGCGAAGAAGACGCCAC 395287 27 85.2 33 ..CA.......A..G............ GTGTTTTCAACATGAGTTTTTAGCGTCTCTGTC 395227 27 85.2 33 ..CA.......A..G............ AGCAAGCGGCGCTGAATTGGTTACGTAAAACCC 395167 27 85.2 33 ..CA.......A..G............ AAAACTAAAGCCGCCAAGCGAGTTGTTACCGCC 395107 27 85.2 33 ..CA.......A..G............ CGCCACCGTGACCGTGTCCGTGTTTGTTTCAGC 395047 27 85.2 32 ..CA.......A..G............ AAAAATCAAAGGGTTCGTTGCTGATGAAGATC 394988 27 85.2 33 ..CA.......A..G............ AGTAACTCTGTATTTATGCGCGATAAGGGTCTC 394928 27 85.2 33 ..CA.......A..G............ GCGAGCGGGTATGGTCGTTTCTTGCAATGGTTC 394868 27 85.2 33 ..CA.......A..G............ TTGTGGCTGATTGAATCCACCTTGCTGTTGCCC 394808 27 85.2 33 ..CA.......A..G............ AATTTACCATTTTCAGGCGCAATGTTTGGATCC 394748 27 85.2 33 ..CA.......A..G............ GAATACCACCGCACCGATGCGGCGGCTCATTTC 394688 27 92.6 0 ..CA....................... | ========== ====== ====== ====== =========================== ================================== ================== 53 27 95.0 33 TTTGCCGCCGAGCACGCGGCTTAGAAA # Left flank : CATTTGAATCTTGGGAAATGGTTAAATCGACTTGAAGACTATGTACATATAAAAAGCGTTGCAGAGGTGCCAGATAATGTGCAGGGTTATGAAACCTTTAATCGTCGTTGTAAATCTGGCTCACCAGACAAGCATATTAGAAGGCGAATGAAACGTCATAATGAAACATGGGAACAAGCGGCAGAATTTTTTAAAGGCTACAACATGGAAAAAGCCGATAAAGATCTGCCTTTTATTCGAATGAAAAGCCTACATAGTGATAACGAGTTTTGTATGAGCATCACTAGAAAAGAAGCTGAGTTGTCCAATAAACACGTTATGTTTAACACCTACGGACTGAGTGCAGAAGGTGTTTTACCCAAGTTTTAACCAATAAAATTTGCTCTTTAAAAAAATACTTTAAAAACAGAAAGTTACAACATGCAGAAAAAACATTGGTAAAAACGTCTATTTTTACCTAACGGCATGTTGTAACTTGTTTTTTTGCAACTAGACTATTG # Right flank : AACGGGTCTAGATTAACGTTGCGAAGTTCCGTATGATTTTGGCCTGCCTATGGAAGAGGGATCATATTATGACTTGGAAACACTCAGGGAAAGTTGAGGCATTTGACGAGATTGGCTTAGATCAGCAGATGGCACAGCAGTATGGTTTGGCATATAACCCTGCAGATCTGATGAGTGCGCGTATTTTTATTTCTCGTCAAGCGCTTGCTATGCTAGCAAGCCTTAACCATTTCGATCAGCAAAAAGTGATCAAAGAAATCGCTTTTGTCTGTAATAACCCCAATAGTTGCAGCTCCACTAAGCACAGCTTAATGCCATTTAAGCGCTTCTATCGTACAAAAGATCAGTTTCGTTCTTATCATTACCTAATTGACTTTAAAATCACGAAAAATGATCAAGTAGTTATTCATGATATCTATCTTGATCAAACGCTTGTTGGTCCAAAGTCGAGACACCGTTTAGAACGTAATATGCTTTACAATGTTAAACGAATAGGTGGC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTGCCGCCGAGCACGCGGCTTAGAAA # Alternate repeat : TTCACCGCCGAACAGGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //