Array 1 147639-149794 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHSQ01000030.1 Bifidobacterium longum subsp. longum strain MCC10097 contig0030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 147639 36 100.0 28 .................................... TCCCCTTTAATAGTGCGTTTCCCCTACT 147703 36 100.0 28 .................................... CTGAGGAAGAACCTGACCAACAGGCAGC 147767 36 100.0 28 .................................... CACATACGACTATTCCAACGCGGATTTG 147831 36 100.0 28 .................................... GAGCGGGTCGGCGGGGTCGGAGAGGTCC 147895 36 100.0 28 .................................... GAGCGGGTCGGCGGGGTCGGAGAGGTCC 147959 36 100.0 28 .................................... GGGACATGTTGCGGTATTGCGGATACCG 148023 36 100.0 29 .................................... ACTATCGACAATAACATGTTAAATATCTC 148088 36 100.0 28 .................................... ACAGTTTCGGCGCGTTCATGCCGGGCTT 148152 36 100.0 28 .................................... GCGTGCGGGTTGTTGCCCCGCCCGTCGT 148216 36 100.0 28 .................................... GTTTAGTGCAAGTTTGTCGTACACTTTT 148280 36 100.0 28 .................................... GCCACCATCAGCACCGATGCCGGCGAAC 148344 36 100.0 28 .................................... TTCCAATTCGACAGGATGCTTCCAATCC 148408 36 100.0 28 .................................... CATTCGGAGGAGGTGTCTGTCTGATAAA 148472 36 100.0 29 .................................... CTGTGCGAGGTCAGCTCGCTGATTGTTGA 148537 36 100.0 28 .................................... GTTTTGCTCATTCCTCGTTTGACCCAAA 148601 36 100.0 28 .................................... ACGCGCCAGTATCCGCCGAGTTTCGCAT 148665 36 100.0 28 .................................... GGTCTGCTGAGGCTGCTGTGGCGCGTAC 148729 36 100.0 29 .................................... AAAGCCCGTCCGGGCTTGCGCTCGGACGG 148794 36 100.0 28 .................................... TGCGGTTCGACGTGCGGTAGGCTGTCCT 148858 36 100.0 29 .................................... GGCTATTCCGGCTCCATGCCGTCCGAGGT 148923 36 100.0 28 .................................... CCGTGCCCAGCATCCCGGTGCTGCGCGC 148987 36 100.0 29 .................................... TCTGACGCGGTGATGCTCAACCGGTCATG 149052 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 149117 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 149181 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 149246 36 100.0 28 .................................... GCCAACGGCGCGTACACCGGCAACTTCA 149310 36 100.0 28 .................................... AAGAAGACCGCGACTATCGGCTACCAGG 149374 36 100.0 29 .................................... GTGGGAATCCTGTTGAAGTGGGGTGAGGA 149439 36 100.0 28 .................................... AGGAGGTTCAACGCAAGTATTTCACGGC 149503 36 100.0 28 .................................... AGTCATTTGGTGTGCCTTTCACGATGAT 149567 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 149631 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 149695 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 149759 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //