Array 1 23727-20893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUR010000008.1 Lactobacillus delbrueckii subsp. lactis strain FAM 22092 FAM22092-i1-1_scf8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 23726 28 100.0 33 ............................ AGGTGGACGTTTTCCAAGGGGGCCAGGGCCTCA 23665 28 100.0 33 ............................ TGGTAGGCCTGCAATGCTACGTTGTTAGTCATG 23604 28 100.0 33 ............................ TATAACAAATGGAATGTTATAACGGCTATGTTT 23543 28 100.0 33 ............................ TTGGACACGCTCGTTAATGATGACGGGACACTG 23482 28 100.0 33 ............................ AAATCTTGGGTGCTCTTCCAAGCGGCGGCACTG 23421 28 100.0 33 ............................ TTGTTACCGTTAAGCGCCAAGTTGTCGAGCTTG 23360 28 100.0 33 ............................ TAGGTAAAAGGGTAGCTATACGGTTTCACGTGA 23299 28 100.0 33 ............................ TTGGCCGGCGCCGGAGTGGTTTGTAGCTGAGGT 23238 28 100.0 33 ............................ TGGATAGCCGCCGAGGCAAATGGTAGCCCAATT 23177 28 100.0 33 ............................ TCGAGACAGTAAAAAACAGGAGGTAAAAAATGG 23116 28 100.0 33 ............................ TACCAAGGCGATCCTAGCCTTTATGGATGCAGT 23055 28 100.0 33 ............................ TTTTGTCCCCCGTCAAGCTCTAAGAAAAAACGG 22994 28 100.0 33 ............................ CTAAAAAGTTGATCTACACATACCGAAAAAGCT 22933 28 100.0 33 ............................ TTCGCCATCGCTACGGCGGTGGGCCTGACGCCG 22872 28 100.0 33 ............................ TGTTCGAAGAATATTGCTACTTTATGCTGCAAA 22811 28 100.0 33 ............................ TAGTTAGGGTTACGCCGCCAAGCCTTGAGCATG 22750 28 100.0 33 ............................ TTTTCAGAGGAGCGTTAACTTTTTTGGAAAAAG 22689 28 100.0 33 ............................ GGGCGTTGGTTTGAGGGGTCGATGTTAGACGAG 22628 28 100.0 33 ............................ TTGTAAAGAAAAAATGAATTTAAAAGAAATTTT 22567 28 100.0 33 ............................ TACCAAGGCGATCCTAGCCTTTATGGATGCAGT 22506 28 100.0 33 ............................ TTTTGTCCCCCGTCAAGCTCTAAGAAAAAACGG 22445 28 100.0 33 ............................ CTAAAAAGTTGATCTACACATACCGAAAAAGCT 22384 28 100.0 33 ............................ TTCGCCATCGCTACGGCGGTGGGCCTGACGCCG 22323 28 100.0 33 ............................ TGTTCGAAGAATATTGCTACTTTATGCTGCAAA 22262 28 100.0 33 ............................ CTACTTATAAGATTAAGGAAACATTTGTAATCG 22201 28 100.0 33 ............................ TATTATAACGGCTATGTTTGAGCAGTATTGCCT 22140 28 100.0 33 ............................ TTTTCAGAGGAGCGTTAACTTTTTTGGAAAAAG 22079 28 100.0 33 ............................ GGGCGTTGGTTTGAGGGGTCGATGTTAGACGAG 22018 28 100.0 33 ............................ TTAAGCGAGTTCGGATTAGTGAAAATGATCGAT 21957 28 100.0 33 ............................ CCACCTCTTTACTCACGCGTATCACTTCGCCCG 21896 28 100.0 33 ............................ TAATTGCGGTGGGTTAGCAAGTGAGCACTGCCG 21835 28 100.0 33 ............................ TTTCGCAACCAGTTCAAAGGTATATCTTGAAAG 21774 28 100.0 33 ............................ CTTATCACTGTAACTATTGCGGGCGCTATCACG 21713 28 100.0 33 ............................ TAAGCAGCTCAAAAAACCACTAGATTTAATCTA 21652 28 100.0 33 ............................ CACTGCTTCTTCCTTGGTCAAAGAGTGGAAAGA 21591 28 100.0 33 ............................ TCGGCCCCGTCATGATCAAAGTAGTCAACGTGA 21530 28 100.0 33 ............................ TTTTGTAGCTATCGACTTGAAGACCTTGACGGA 21469 28 100.0 33 ............................ CTCTTTTTGTGTAGTATGTAAAAGTGTAACACG 21408 28 100.0 33 ............................ TAGTATCGACGGTTGGACTACGGACGACGAAAA 21347 28 100.0 33 ............................ TCCCGGACTGCTTCATCCTCAGACGTCCATAAA 21286 28 100.0 33 ............................ TGATATTTTACCGCTAGCCCTTGATCATGTCAA 21225 28 100.0 33 ............................ CTTTTTTTGAAAAATCTATAGCGCCTTGCAAAT 21164 28 100.0 33 ............................ CGATGTTCGAAAGCTATTGTAGTGATCTGCTTG 21103 28 100.0 33 ............................ CGACTGAGCTATATGATGAGTACAGCTCAGACT 21042 28 100.0 33 ............................ TGGTCTTGATCAAGAAAGTCAAGCTGCCACAAA 20981 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 20920 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.7 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //