Array 1 13279-7656 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJPO01000039.1 Rhodovulum strictum strain DSM 11289 NODE_39_length_22099_cov_42.0574, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 13278 32 100.0 35 ................................ ATGGCTGCATATAGCAGCGAGGCCGCAGAATGAGC 13211 32 100.0 34 ................................ ACCTGCTGGGCGGAATGCCGAAGGCCGCGGCCGT 13145 32 100.0 35 ................................ TGCCGAACTTGGGCTTCTCGATCGCGAGCGATCAG 13078 32 100.0 33 ................................ ACCTACGGGGCGTCGCCCACGCGCTACGCCCTG 13013 32 100.0 36 ................................ GATGTGGACGACTGGCTGTCCCGCATCGAGGACGAC 12945 32 100.0 34 ................................ CACCGGACAGTGATGCTCCAGCTCCGCGGGCCGC 12879 32 100.0 34 ................................ AGAGGCGATATTGAAGGCCATTTTTGCGTCCTCG C [12875] 12812 32 100.0 33 ................................ GAGATCAGGGCGTCGGTCTGGCCGTCGGAAGTA 12747 32 100.0 34 ................................ GCGCCGCGACGGCGCCCTGCTCGATCAACAGGAC 12681 32 100.0 34 ................................ CCGGCCGAGCACGACTATGTCGCGGGCGGGTCGA 12615 32 100.0 35 ................................ TACATGAACGGCCGAAAGCTGGACTGGAACAATCC 12548 32 100.0 34 ................................ CCCTCATGATGCGCCAGCAACAGCGCGCCCTTTT 12482 32 100.0 34 ................................ GGCCTGATACCCACACAGGAGGCCATGATGGCTG 12416 32 100.0 33 ................................ ACAGCCGAGCTGACGCCGAGGGATCGGCTGGTG 12351 32 100.0 33 ................................ CGTGCTGACCAAGCTGCGGCAGGAGGCGGCCGG 12286 32 100.0 35 ................................ GCGCCGTCTACCATCGAGGTCACGACGACCGAGGG 12219 32 100.0 34 ................................ CCGCGATGGGCGAGCTTGCGACAGCCATGACCGA 12153 32 100.0 34 ................................ CGCCTCGGCATTGTTGAACTCGAACGGCTCGGAC 12087 32 100.0 34 ................................ CTGACGGAAGCACGGCGGGCCGAACTGCGCGCGC 12021 32 100.0 35 ................................ TGACAGCCGACGACCTGATTGCCGCCGCCACAATC 11954 32 100.0 35 ................................ CTGTCTGAAAGGGTGCGGTAGAAGAAAGGGGCGAC 11887 32 100.0 36 ................................ GACGACGAGGCGGGTGGCGTGGCCCACAACTGGGCG 11819 32 100.0 34 ................................ AGCCGCAAGACGCTGGAAGACATGGCCCAGATGG 11753 32 100.0 34 ................................ TGGCGTCCTCGTGATGTCTGACGGCTGGGAGCGC 11687 32 100.0 35 ................................ GCGGACAAGGGTCCGCAGATGGCCGAGCGGATGCA 11620 32 100.0 36 ................................ GAGCCGTCCTCGGATGGCACCTATACCCTGGTCGAG 11552 32 100.0 35 ................................ CGCCATCAATGCGAATTTTGCTTATGTGGATGCTC 11485 32 100.0 35 ................................ TCGCGTGGCAGCTTAGGAAGATCAGCACGCCTAAC 11418 32 100.0 34 ................................ CATGATCCGGCGAAGATGCCGGAATTCAGGGAAG 11352 32 100.0 35 ................................ ACTGCCCATACAGGCATTCTCGGTGCTGACCAGTT 11285 32 100.0 34 ................................ TCGATCATGCGGCGCCGATGGGCCAGCCAGCCCG 11219 32 100.0 34 ................................ CAACAGGATAGCGGCAGTCGGCGCGATGCCCGTC 11153 32 100.0 34 ................................ TCCCCGGCCAGGAGCATGCGGATCACCCGGGCGG 11087 32 100.0 34 ................................ TACGGACCCGCGGGCTTCGGCAAGTCGATGGCCG 11021 32 100.0 35 ................................ ATCGGCCAGTTGGCATTCCTGACGGTCGACAACGA 10954 32 100.0 35 ................................ ACATCGCCTCGTATGCTCTGGGGGGGTCTGACGCG 10887 32 100.0 36 ................................ GTCTCGACTGGATCATCGTCGGCGGCGAGAGCGGCA 10819 32 100.0 34 ................................ TGCTGGGCGTCCCCACCGCGCCACCGCCCACCGC 10753 32 100.0 36 ................................ TTCCGCGTGCGTTTGACGATTGTCTCGCTCTCGAAG 10685 32 100.0 33 ................................ AGAGCTGAGTACGGCCAATTCCAAAGGAAAAAT 10620 32 100.0 35 ................................ CAGGCCAAGGCGGGGCTGCGCGTGGATGGTGTCGT 10553 32 100.0 36 ................................ CTGCGCGACCGCCTGACCCAGCCGGACGGCTACGAA 10485 32 100.0 34 ................................ GATCCCGACCAGATCGACGCGATCAAGGCGTTTG 10419 32 100.0 36 ................................ AGCCCCTGCGCCGGCCTGCCGATCGAGGCCCGCCGC 10351 32 100.0 35 ................................ GGCACGTTCCTGATCGCCAAGGGCGGTGCCGGTGG 10284 32 100.0 34 ................................ GACCAACTCGGGTGCGTGCGGATGCAGGTAACAA 10218 32 100.0 35 ................................ AATCTGAAAATCAAGACGAGGTTTATCAATGCCCC 10151 32 100.0 35 ................................ GTCGGCGCGAATATCCTGTGGGACGAGGCCACCGG 10084 32 100.0 34 ................................ CCCAGTATGCTGCGCATGTTCGTCGGCGCGAATA 10018 32 100.0 35 ................................ CGCAGCGTCCTGCAAACCGCGCCGGAACCGATCTG 9951 32 100.0 36 ................................ CGGGTCGACCGCAGATGTGGTCCTGACCATGGGCGC 9883 32 100.0 37 ................................ ACGATGGCCGCCGCCGCAGTCCCCGTGTCTGGGGCAG 9814 32 100.0 35 ................................ ACCGAACAGAAGACCCATGAGGATCGCGAGTTCCA 9747 32 100.0 35 ................................ GGTGCCGCCGCCGAAAATGCCATCGGCCGGCAGCC 9680 32 100.0 35 ................................ GTGTCGTGCGGCGTGATCTCGGCCAGCCGCTCGGC 9613 32 100.0 35 ................................ AACAATGTGCTGTCTGAACGTCTGTCCGCGACCTA 9546 32 100.0 36 ................................ AAGCAATCGCTGCCCCGGATCATCAACCAGCCGGGC 9478 32 100.0 34 ................................ TGCCCTACCCGGCTACGGGCGGCGATTACACGAC 9412 32 100.0 33 ................................ TTGGCGTGGAGCGCCATCACTGCACATCGTCCT 9347 32 100.0 35 ................................ TCCAGCTCGGCATTAGCGCGGGCCAGAGTCGCGGG 9280 32 100.0 34 ................................ CGTTTGTCGTGATCGGAGCCACCCCCACCGCTGG 9214 32 100.0 34 ................................ AGGCGCACCGCGCCGGTGGCGCTGGGGTTGGCCG 9148 32 100.0 33 ................................ AACAATGTGCTGTCTGAACGTCTGTCCGCGACG 9083 32 100.0 34 ................................ TACACGTCGCCGCCTGAGTTTGAATGGCTTGGCA 9017 32 100.0 35 ................................ AGCGCGCGGTGGCCTCTGCCGGGCTGACGGATGTC 8950 32 100.0 34 ................................ ATCTGGCGCAGCGCCAGACGGCCGGCGGCCACGG 8884 32 100.0 35 ................................ TGGGACTGGCTGGATGACGACCTGGCCGATGACGG 8817 32 100.0 34 ................................ TCCATCACCCCGACGCAGTTCCGGACGGTGAGCC 8751 32 100.0 34 ................................ CGGGCGCATCTGGCCGATGTTCTGCCCGCCCCCG 8685 32 100.0 34 ................................ AAGTTAAAGGCAGAACGATTGCCGTTGCCGCCAA 8619 32 100.0 36 ................................ CGCATTGTTAATGGGGCAAACATTAATCCGACAGAC 8551 32 100.0 34 ................................ GCGTCAGCCGCAGCCGCGCGGACGGGATCGGGGG 8485 32 100.0 34 ................................ AGCGCCGTTACGGCGCAGGTAATCGCGCGGTCGT 8419 32 100.0 35 ................................ CGGCTCGACCGCAGATGTGGTCCTGACCATGGACG 8352 32 100.0 33 ................................ CGGCCGCCCGAGGCCGAGGCGCGGGCCGCGTGG 8287 32 100.0 35 ................................ ACGTCCCCCAGCAGCGCCATGGCCGGGGGCAGATC 8220 32 100.0 33 ................................ GCCCGCCAGCGCCAGCAGGCGCAGGGTGTAGTG 8155 32 100.0 35 ................................ CACTGGCTGTAGGAGACGGCATCTTCCGTGGCGTC 8088 32 100.0 34 ................................ GCGAAGGGCGATGCGGCGGCACTTGGGACTATCG 8022 32 100.0 35 ................................ GCCTGCGCAAGGAATGGGTGGAGTTCGACCCGCGC 7955 32 100.0 35 ................................ ACGCGAATCGACGTGATCCGCTAACCGAAGGGAGT 7888 32 100.0 35 ................................ GGCGCTATGCCCAGCGCCCGCGCGAAGGCGGCCCG 7821 32 100.0 35 ................................ ATGCAACGCGGCGAATGTGGGACGGGCTGCACACC 7754 32 100.0 35 ................................ CATCGCGAAGTCGGACTGCCAGGACTTTCGAAAGC 7687 32 93.8 0 ..............................CT | ========== ====== ====== ====== ================================ ===================================== ================== 85 32 99.9 35 GTCGCCCCCCGCGCGGGGGCGTGGATAGAAAC # Left flank : CGACGGCTATCCAGCCTGGATCTGGAGGTGACATGCTGGTTCTGGTGACCTATGACGTGCGCACGGATACTCCGGCCGGCCGCAAGCGCCTGCGTAAGGTGGCGTCGGCTTGCGAAGACTATGGCCAGCGAGTGCAGTATTCGGTTTTCGAGTGCGATCTCACCCCGGCCCTGTGGACGTCCTTGCGCGCCCGGCTCGTTGGCCTCATCGACCCTGAGCACGACAGCCTACGCTTCTACATGCTCGGCGCCAACTGGCGCTCGCGGGTGGAGCATGTGGGCGCCAAGCCGGCGATCGACTACGACGGGCCGCTCATTTTCTGATACGCGAACCATGAGCGGCCACGCCGTCACGGGAGTGTTCGCGCGTCGATTTTTCCTGACGATTCAATATGCTTATTTCGCGAAGGTTGATTTTTGGCCGCATTTTGGGCCGCGCGCAAGGAGGTTCGCGCAGAGCGTCGGATTTCCTGTTCGCCCGGAATGCGCTAGACAGACGCC # Right flank : CGATCATCACCGCGGCTGCTCTGATGGATGCCTGGGGGCGCTTCGCCACCGGCAAGAACGGCCAGGTCGTGAAGCTTGTCCGGTGATGCGGGCGCGCTTTCTCACTTCCCGGCCTTCTCCTTCGCTTCGATCTCGAACGCTGCGCGCCCCCAGTCGCGCCAGACCTTGCGCGCGTGCTCGCCCTGGTCGCCCTCGAGCCGGTCGGCGATCCACAGGAGCGCGCCGAAGATCAGGGTGCGGTCGTCGCCGGTGATCTCGACGATGCCGGCCTTTTTCACCAGCCCGCCGAGTTCGATCAGCTGCCGCGTGCGCTTGCGCCGGTCCATCTGCCAGTCCTGCCGGTCATGCCGCGCCCGGGCCGCTTGAAGGCGGTTGCGTGCGGCCCGGTTTCGTTTCAGCGCCGCCGTAGTCGCCGCCATCCGTCGCAGCAGGTCTCCGCGACCCGCCCCGAAACATCGCCGCCCCGCGCTTCGCCCAGGCCTCCCGTTTCGCCGCGTCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCGCGGGGGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //