Array 1 48802-47578 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXSL01000022.1 Eikenella longinqua strain NML02-A-017 Eiksp_contig000022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 48801 36 100.0 30 .................................... ACACGGTGCTGCTGGACGAGCGGGACTTCG 48735 36 100.0 30 .................................... AACAAGCTTTAGCCATCCGCTTTCTCTGCC 48669 36 100.0 30 .................................... GTCAACAAGAAATGGGAAACCGAAGACAAG 48603 36 100.0 30 .................................... GCCTTGGGCTTTGAGGCGGGTTAGATGTTG 48537 36 100.0 30 .................................... GCTTGATATTGGCTAAATTGCTGTTGTGCC 48471 36 100.0 30 .................................... AAACGTGTTGAAGGTAAGCCTTACAATCTG 48405 36 100.0 30 .................................... GAATCATTTGTACGATATTGCCATTTCGTT 48339 36 100.0 30 .................................... TACCCAAGGCAATGCGACTTATTCCTTGTC 48273 36 100.0 30 .................................... CTATCACGCCGCCAGTATGGAATTTACCGA 48207 36 100.0 30 .................................... ACAGATGTTGTACTATGGGAAATCGAACCC 48141 36 100.0 30 .................................... ACGGCCACGCCCAGTATCGAGTTCACCAAG 48075 36 100.0 30 .................................... TGCCATCGAAAGTACAATAGCTTTTCGAAC 48009 36 100.0 30 .................................... CAAAGCCAAGAAGGTAATTGCCATCATTAG 47943 36 100.0 30 .................................... CCATCTATGCCCTGCTTGAAGAATCCGGCA 47877 36 100.0 30 .................................... GAACACAGGGTCGGTATGCGCATACTCGAA 47811 36 100.0 30 .................................... TCCAAGATGTTGTCGGCGTGGCGGTCGGTA 47745 36 100.0 30 .................................... ATGATGCCGAAATTGAACGTAGTACGATTC 47679 36 100.0 30 .................................... TGTTCATATTGGCCTTCGTAGTCGATATAT 47613 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTGTAGCTTCTTCTCTTATCTCGTAGTGTTACAAT # Left flank : TGTTTGTCGCCATCGATGACTTTTCAAGGGAACGGTATGCCGCCATCCTGCCGGACAAAACCGCAGACAGTGCCGCCCAATTTCTGACCGAACAGCTGATTGAACCCTGCCCATACCTGATCGAATGCGTCTATTCCGACAACGGGACGGAATACAAAGGCTCGGCCAACCATGCTTTCGGTGTCGCCTGTTATGAGAACAGGATTGGCCAAAAGTTTACCCGTGTCGCCCGTCCGCAGACCAACGGTAAGGCGGGACGGGTGATCCGTACCTTGATGGAGATGTGGCACGATAAGCAGGAGTTTGACAGTCCCGAACACCGGCAGAAGGAGCTGTGCCGCTTTGTCAATTTTTATAACACGGTAAAGCCGCACCGCAGCTTGAACGGTGATACGCCGTTTGAGGTGTTGCAGGCTTACTTTTCCCAAACTGTGGTGTAAACAACGCGGTTATTTCCTACATGTTACAATAGTAACAACAGTTTCAGGGCTGTTTTCGTA # Right flank : AGACAGGCAGGAAGTTATTGTTTAATAATGACTTCCTGCTTTATGTTCATCTAAAAATTTGCACTAAAACAGCAAAAGTTGATCTGCATTGACCTTTTTTTCACGAGTTTTCCGTTCTCCGAGCAGTATAGACATTCCTGCAAACTGCTTTTCAGTTACCTCCAAACACCGAATAGATCCTTCGCTGGGCAATTGAGCGCGTAATCGTTTGTGGTGTTTTTCCAACGCATCACGGCCACGTACAATTCTTGCATATACTGATAATTGCAACATTTGATAACCATCTTTTTGCAAGAAATGCCGAAACTGGTTTGCAGCCCTACGTTTTGATGCAGATGTAACCGGTAGGTCGAAAAAGACAATTAACCGCATAAATTTAGCCTCACTCATAGCCGTGTACCTTCAGATCCAACATTTCAGGTAGCCTGAGCATTTTTTCTCCGTACATTAAAATAGCTTGAAATGATTGGATTGTTCGATCAATGGCTGACAAAACCGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTTCTTCTCTTATCTCGTAGTGTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTGTAGCTTCCTCTCTTATCTCGTAGTGTTACAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //