Array 1 185682-185921 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDR010000002.1 Anaerovorax odorimutans strain SL.2.09 ILCIMCIL_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 185682 34 100.0 34 .................................. GGCGATCCTATGTATCCAAATATGCTATATGTGT 185750 34 100.0 34 .................................. CACCTACAACGCCGGACGGTACGTGACACATGTT 185818 34 100.0 36 .................................. TACAATCTTTCTTGCTTCTTCCTTGCTGTGAGCTTT 185888 34 94.1 0 .................A......A......... | ========== ====== ====== ====== ================================== ==================================== ================== 4 34 98.5 35 GTCGCATCCCTGTATGGGGTGCGTGGATTGAAAT # Left flank : GCGCACAAATCGAAAATAGCGGGAATTGAAACCATTATCTATGCCTGTCAGAGTGTCATCAGAGGAAAAGAGACTCGCTATGAGTTGAAATATACAGTGACGAATTGTCAGTGGCAGTTGTATAAGATATGACGGCAAAGGCGAAAGTCAAAGCATTCGGGTCCCGGGAATAAAAATAGGATAATCTGATCTCCTTTTTAGAAAAATGAAAATATTATAGTGAGTAAGGATGGTAAGGAGAAAATAAAATTTGAAATTATAATGATTATGGCTCGTATTCTTGATATAATCAGGGAAGAGGATCCTGATTGGGAGGAGAAAGCGGCTTTTCTTTATTCTGGTGCGAAAGGTAAGCACACATAGAATCTCCGGATCTTTCGCACCAATAAAAGACTGGCTTTGGTCATAAACGTAGGACGAATTAAGAGTATGGCACAAACACTAGCAGGTGAATAGCAAACTAGTGATCAAAAATAGGGATTTTTTTTAATAGGTTTGCA # Right flank : TCGCCTTTTTCCACAAGGAAACCCCGAAATGACCCACTTATCGGTCCTTTTTGCTGCATCCTATATGAGGACGCTGTAATGTCGCCGAGACATTCAATCCTTCGATCGGTTATTGCTGATTCCATACCAGATTGGAATTTAAAGTTGTTAATGCTGAAGGTTTTGGTGAGAAATCTTTTGATTAAATAAGTGCCAGATTGGAATTTAAATGTGCGTAGCTGCGAGGATGTGGATGAAGCAGCGTTTTATTAAATAAATACCAGACTGGAATATAAAGGTTCATAGCACCATAACAGTGTGGTTTTTCTCTATTCATTAAATAAGCACCAATTGCAATATACCGCTGCTCCGCGGTAGTCAGATCAGGACAGCAGGGCGAATGAAATAAAACCGATTGGTAGATTTGAAAAAATATCTGCCATCATTCCGTAGCACGATGGCAGATCAATGAGGACCGCATACTTTTACAACGGCTATATGAGATGTGAACAAAGATTTAT # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTGTATGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 345818-344648 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDR010000003.1 Anaerovorax odorimutans strain SL.2.09 ILCIMCIL_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 345817 33 100.0 35 ................................. CGCTTTAACCAGGATAAAAATGCAGTCGGGTTATA 345749 33 100.0 35 ................................. CGGATTCGCAAATACCGATGCCGCCAGCATCAGCC 345681 33 100.0 34 ................................. GTTGACTGGTCTTGATTGGAATGTAATCAATAGC 345614 33 100.0 34 ................................. ACCTTTCAGCAGCTTTTTATAGTCGCCGTTCTTT 345547 33 100.0 34 ................................. TGTGACACTTGTGGCTGAAAATGCAAAGGCAGAA 345480 33 100.0 35 ................................. GGGAACGGTATTTTGACAACGTGGCCGGCCAAGAC 345412 33 100.0 33 ................................. TGCTGACTGGTCTGGTACAAAAGCCAGTATCGG 345346 33 100.0 33 ................................. AGCGGCACGATGGAGAAGCAGTCAAATAAACTT 345280 33 100.0 35 ................................. AGTATATTTCCAGATTTCTTGACCGTCTGGGCTAA 345212 33 100.0 35 ................................. CCGTCTGCATGTGTCGTCGATATATACCCGCTCAT 345144 33 100.0 33 ................................. CAATTCTAAATATCGATCAGAGTCTTTATAGTC 345078 33 100.0 34 ................................. TCTTTCCAGGTCTTCAATCTCTCGTGGCAACCCT 345011 33 100.0 33 ................................. TTAATTGACCAAACACCCGCACATAAGCGTCAA 344945 33 100.0 33 ................................. AATGATGGATTTTGGGTAAAAAACGGTGATTAT 344879 33 100.0 33 ................................. ATCCTGCTGATTGCATCTACAGCTATGTTCAGC 344813 33 100.0 33 ................................. AATGATGGATTTTGGGTAAAAAACGGTGATTAT 344747 33 100.0 34 ................................. AAACATCCCGATCGGCGTTTTGGTCACATCCGAC 344680 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 18 33 100.0 34 GTCGCATCCCATACGGGGTGCGTGGATTGAAAT # Left flank : TCCAGAATAGATTCCTACTTGTTTTTAAACGCTTTCACTGACCAGTTTTGCCTTGTGGGATCGTCATCATCCGAATTTTGCTTATCCCAGAGGTACAGGCCAATTATTGCAGCTTTAAAAATCTCTTCGAATTATTTGCCGAATCAATAGATAGATATGGTACAATAAGATGTATTGAATATTCTTTGCTTAAAGAGATATTCCAATTACGGCAGAGAAATTGGTAAATATCGTGGTTGAAGCGGATAGACGTGCCGTTTTCTCTGGTGTGCGTGGTGCGCTCTGCGGAGGAACTTGCTGATGAGGAGCAGTTGAATGAATAAGGAACGCTTTAGCTGGTGGTGCGAAAGGCAAGTGAACATGGATTCCCAGGGGCTTTCGCACCAGTTAAAAGGTGAAATTGGGGTATAAATGATAGTAATTTTGGAGATGTTATGGAATTTGGGTAGGTTAAAAACAAACTAGTTATGAATATATGAGGTATGCTTTATAGTTTTGCA # Right flank : TGGAGTATGATAATTTTTTAAAATTCCAGTTGTTATTGAATCGTTTCGTTACCAATAACTATCAGAATAAGCGCTTCCTGGCAGCAATCACGATATTGGGCCAGCTGACATACAAGTGATCCTGCTTTTCCACGAAGTATATCTTGAACGCCGGATTGAAAAAAGGGTTAGTAGAAACCAAATAAAACTTGCTGAGATGCGGCCCGTAAGGTATCCTATTCTTAACCTCTCAGTAATGACGGAATCAGCGGTAAAATAAGATGCTGTCAATTCCATCTAAAAGCCAGCCGCAACCAAACAACTGACCAACACCAAAACAGAAACTTGAACAATGAGAAGGCGAAGCCCCAACCGGATGTTGGGTGCTGGATCTTTACATTCATATATTAGGAGGAATAAATAGTAGGATGAAATGGACAAAACAGCAACAAGAAGCCATTAACCTGCGCGACCATAATATACTAGTCTCCGCTGCCGCCGGCTCAGGAAAAACGGCGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCATACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 349417-348504 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDR010000003.1 Anaerovorax odorimutans strain SL.2.09 ILCIMCIL_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 349416 33 100.0 35 ................................. AAACGAACATAGACGACTCCACGGCGTTTGATGTG 349348 33 100.0 34 ................................. CACTCCTGGTTCCATACAGGCCATTGGAGCGTTA 349281 33 100.0 35 ................................. CTCATCTTGCGGCGGACTTTGGTATAGCCCCCTGG 349213 33 100.0 34 ................................. ATACATTACAATTACGGTAAAAGGGAGGCTAAGA 349146 33 100.0 35 ................................. CAGCAATTTACTTTTTGCCCATTCTCCCTTATCCT 349078 33 100.0 33 ................................. TGGTAGGCAATGTCTGCCACCTTGCTTCTTGGG 349012 33 100.0 35 ................................. AGCAATGTCGACCGCAATCTTGATCATACTGTTTC 348944 33 100.0 36 ................................. TGGGACCTATGCAGTGAAAAAAGGCGACTGCCTGTG 348875 33 100.0 36 ................................. CGGTTGTAAGCAGTCAGGCAGCAGACGCTGTAATAC 348806 33 100.0 34 ................................. TGCTTAGGTACCGATTGTTGTGACGTGTAGCCTG 348739 33 100.0 34 ................................. AAAGATATCGACCTTTGTCATGAGAGGCCGGAAG 348672 33 100.0 35 ................................. TTAATGATGATCTGATACATCAGCTAATCCCCCAT 348604 33 100.0 35 ................................. GTACAAACCGCTACATCTAAGTAATTGCAATAGGC 348536 33 87.9 0 .C................GTA............ | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 99.1 35 GTCGCATCCCATACGGGGTGCGTGGATTGAAAT # Left flank : GCCGTTTTTATGGAAATAAAGGAGTGATTTTATGTTGATATTGATTACTTATGATGTATCCACTCAGAATAGCGGCGGGAAGCGGCGACTACGGAAAGTGGCCAAAGAATGTGTGAATTATGGGCAGCGGGTGCAGAACTCTGTGTTTGAATGCATCCTCGATCCGTCTCAGGTGCTGCTTTTGAAGGACAAGTTGTTATCTATTATTGATACGGAAGTAGACAGCCTTCGGTTTTATTATCTTGGAAATAACTATGCGAATAAGGTTGAACATTTTGGGGCCAAGGTGGGTTATGAGGCAGAAGGCGTTTTAATGGTCTGAAAGCAGCCTGATGCGCTTGGTGCGAAGGCCAAGCGAACATGAAATCCCCGGGTCTTTCGCACTAAAATTCGATTGAGTTTTTACAGAAAATGGTTAGTTATTCAGGGAATTGAATTGAAAGTTTCGTATTTAAAGCAAGATTGTACAGAATCTATTTGAAATTTTGTATTGTTTTGCA # Right flank : GCAAGCGGGATCTCATAGCAGTTTGCGAGATATTTGTGCCGTACCATACTACAGGGTGTATAAATACTAGATTTGAAATACGAACGCAAAATATGATAGCATAAACCATATAGAGGCTGTATCGTATATGTGACCAAAAAGGATTTATATACTGATCATATAGTTCTTGCTATTTTTTAACGACATTGTCGAAGGGAGAGCTATAATTTGCAGCGACGTGATTTGCATATTGGGTCAGCAGAAAAAAGCAAGTCTTTAGAATCTGTCAATATCGAAATTTCAGATAGGAAAGAATTAGTTTGATAGTTTACTGTCCCAAATCACATCGATTGGAAGTAAGCAACTTAAAAATTGTCAAAGATTGGTTTGAATTCTTCCAAATTTGATACTTTGCCGACTTTCTTCAAGCTTGTATAGAAAAAGTATCAATATAAAGATAATTACTCTTAAATCCTGATAGTTTTGGATGAAGCTGAATTGGATCACTTCGCATGTCTAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCATACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 3 358483-357788 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDR010000003.1 Anaerovorax odorimutans strain SL.2.09 ILCIMCIL_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 358482 32 100.0 35 ................................ AAAAACAGATTAAAAGAAGTTGTTGATATCATTGC 358415 32 100.0 33 ................................ CTGCGTGATCCGCTTGGAGCGGCGGCACATCTG 358350 32 100.0 35 ................................ AGAACACAAAATATGTGATCCCAGCCAGAATTGAG 358283 32 100.0 35 ................................ AACTTTCTTCCCGGTGATACCTTGGGCATCACGAA 358216 32 100.0 34 ................................ CGCCATTGGTAACCTTTTCGGTACGCCAGTTCCA 358150 32 100.0 35 ................................ TGGGCGCAATGCCGGTGGTGATCGTAGATGATGTC 358083 32 96.9 35 ..................A............. AGAAAGAACTGAAAAATTTATTGAACCAGCTGGAT 358016 32 100.0 33 ................................ CTTCCAGATCCTTAACCATAAACCACCATGTTA 357951 32 100.0 34 ................................ CGGATTGGATCGGCTGCTGTCGCTTTTGGCACTC 357885 32 100.0 34 ................................ GTAATGGCTTCGATTAAAGCAGCTTCCATTTTAC 357819 32 96.9 0 ......................A......... | ========== ====== ====== ====== ================================ =================================== ================== 11 32 99.4 34 GTCGCACCCTTTGTGGGTGCGTGGATTGAAAT # Left flank : GAATGAAAGGATTGAAATTATGATAAAGATTGAATTGCTAAACGTTTCCGGACAAACCATACAAGGGCTTTCGATCAAAGAACCCGGCGGTGAAGGACACCCCAATATGCTGATTTTACTTTGCAAAAGGGGATATATTATGTGTGGATATTTGAATCAAGCCGCAGCGGAAAAGTTTAGCGACGCCGCTGCGATCATCAGTGGCAGCAGCTTTGATGAACTGTTGGAAAACGCTGTAAAAACGGTAACTCCCGAAGCTGAAAAACTGGGTGTTACCGTTGGGATGAAAGGCGCAGAGGCTGTTGTAAAACTAAACGGATAAGGGAAATTGTAAATGCGAGGTGCGAAAGGCAAGCGAACATGGATTCCCTGGGGCTTTCGCACCTAGAATAAGCTGAATTTAATCGTAAATTGTAAGAGATTTGGGAAAGTAGTTTGAAAACAAGTAGAGTAAAAGCAAAATAGTAATAAATATCGGAGATATTTTTAACAGTTTTGCA # Right flank : GGCAAAATCTCACAGCCGAGTGCACTGCAGGTATGTAATTAGCTCCCGGCATCCCCATATACTCCAAGTTGCCGGTACCCTGTATTGTAGATGCTTTTGAATTGTTCAAATAAGGCAATATTCAGCATGCTATGAGCATGGCACCAGACAAGATCGTTATCTCGTAACCCAATCCCTCCAATAATCGTCATAATAGACGAAAAATTTCACTTTTTATCCACGATTGAATTCCATTTATGGTATGATACAAGTAAGAAAATTATGGAAGCGAGCATGGGTATGAAAAACAGCAAACTATTCGCGCATATTACAAAGATCAATGAACAGCGAAACGAACAGACCATAAAAGAGCACTCTGTAAAAGTCGCTGAATACGCCGGGGAAGCGCTAAAGGGAATCGGACTCTTTTTTATCAGTTATCTTGGCGGGCTGCTTCATGACATGGGTAAGGCCAGAGAGAGGTTTACCAAATACCTTGAGGAGCAATATGCAGGTGGACA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTGTGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 404108-405033 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDR010000003.1 Anaerovorax odorimutans strain SL.2.09 ILCIMCIL_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 404108 34 100.0 36 .................................. CCGGAAGAGGGGCCGTTCATGATGAATCGGGGCGAG 404178 34 100.0 35 .................................. GGGAGCGGTATTTTGACAACGTGGCTGGTCAAGAC 404247 34 100.0 35 .................................. TCCTGCGCCCCGGATCACTGTTGATGCCGCCATAT 404316 34 100.0 34 .................................. CGGGAAGTTTACGAGCAAAACATTGGGAGGCTAT 404384 34 100.0 34 .................................. ATCTTTTCCGCTGACATAATAGCGCTTACCTTCA 404452 34 100.0 33 .................................. GAGATAGCTGTGGTGCGGCGGTATGTGTTTTAA 404519 34 100.0 35 .................................. ACAGACCCGAACGCATTTATAGCAGCTATGGTCTA 404588 34 100.0 36 .................................. CTTTGATAACAAGTGGCTGACAGAGAAAGGCATGTA 404658 34 100.0 35 .................................. CAGCGGCGCTATGGCCTTGCTGTAGATGGCTCTGT 404727 34 100.0 35 .................................. TTGTACGGATCCCATCGTTTTTTACTGACGTCCTT 404796 34 100.0 33 .................................. TGCAGCAAGTGGCGGAGGCAGTTTTTCCGAGGT 404863 34 100.0 35 .................................. AGAGCCTGCATGATTTTTTAGAGCAAGGTGTGTAT 404932 34 97.1 34 .................................G ACTCGAAAAGAAGAGTCTTTAAAGGGAGTTAAAA 405000 34 85.3 0 .G......T.......A.A.A............. | ========== ====== ====== ====== ================================== ==================================== ================== 14 34 98.7 35 GTCGCATCCCCATACGGGGTGCGTGGATTGAAAT # Left flank : TGTACCTTTCGAAAACGAAAGCCAGAATTTCATAAGCTGTAAGATGGGCACTTGGTGCGCTGTCAAAATGTAAATTACTTCCTTTTATATTCGAAACGCAGCAATTTGGAAGCGATGTCCATATAAATTCCGCTTTCTTGCGCAGAATCAGCTCCAAAATCATACAGTTAAACCCATATTTGTGCAAATTTATATGTATGATTCCTGAAAACAAAGCAAACTAGTCTTTAAGCAAAATCAATAATGGTAAAATGTGGTAATTTTCTATGGACATTCACTCTCGTTTTACCCATTTCGAATATAAATCAGCAAAATAAATGCAAACTGGCCACACCAACACTAGTGCGAATGGGAAGCAAACATAAAATCCCTAGGTCTTTCGCACCAAGTATGAACGCTCTTACTATCTTAAAACCTACCGAATATGTACATTGGGCTCAAAACATGGTATACTATGAGCAAAATAGTATGAAAAAAGCTATAAAATGTACTATTATGCA # Right flank : TTATCACTATCATATTATCACATACCCTTTTCCAGTCGCATCCCCAGGGGCATGTATGAAATTCCGCCCTCCCCGCCAAAACAGGATCAGAACCGTGTTATTTAACCCCTTTGAATTCAGATCACGCAAAAAACAGGCCTGCAGGAAAGCAGCACCCGTTTTTCGCATGTATCATTTTTATGTTATCACAAGTTTTACTTAATGCATTCAGCCAGCACCTCGAGGAATTTGTCGCAATCCTCGGGGTAAATTTCACCCATGTTGGCAACCTGGAACATACCCATTTCCACGTATTTGCCCTTGCCGCTGTAAACCACGTAGCCCTTTTCTTCCATTGCTTCCAGGAACTTGTTCAGATCCTTGCCTTCCGGCAGGAACACGGAAGTTACCGTATTGGCCATGTGCTCAGAAAGCAGCAGCTTCAGCCCCATAGCCTCCATGCCTTTTCTCAGGATTCCCGCGCACTGTGCATACCGATTCAGCTGATGCTCCACGCCTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCCATACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : NA //