Array 1 14513-10459 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEP010000012.1 Anoxybacillus tepidamans strain DSM 16325 Ga0415324_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 14512 30 100.0 37 .............................. GATTCGACAAGTGGAAACGCGCAAGAGCAAATGCCTA 14445 30 100.0 38 .............................. TCGATCTGTGTTTCTGCTTGGCTAATGATAAACAACGT 14377 30 100.0 40 .............................. GCTAGAGACAGTGTGATGGATCGCGTCATGGGACTAGATA 14307 30 100.0 38 .............................. TACTTGTCATAGCAAATTTCTTTCACCGAAACGCCGTG 14239 30 100.0 35 .............................. AATACAAGCTGGTCACCGCCAGGTAAAGGTGGCTT 14174 30 100.0 38 .............................. CGTAAAGGGACATTGATATCGACTAGTCCGCGTTTTAA 14106 30 100.0 37 .............................. CTCAACGATAGACGCAGCGACCAATCGACACGTATCG 14039 30 100.0 36 .............................. AAAACGAGACAGTCAATATGACAAGTCCAACACTAC 13973 30 100.0 35 .............................. TCTCAAAATGATGGGCTGGTAAGGAGGTGAGAAGA 13908 30 100.0 35 .............................. GCTAATTGCTGCAAAATCTTCAATGCCTCGTTAGC 13843 30 100.0 36 .............................. ACGATAAAGGTATCCTCGGGACGAAGGATAAAATAT 13777 30 100.0 35 .............................. CCCATTGTGGGTATCGACAATTGTTATGTAGACGA 13712 30 100.0 37 .............................. ACTGGATATTGCGTGCAATAGATTAAGCGGTATCCCA 13645 30 100.0 35 .............................. CAAAAACAAGAAAGAAAAAGCGTCAGTTCGGAAAA 13580 30 100.0 35 .............................. AATCCAAAACATAAAATTCGGCGTTCTCCGGCTGA 13515 30 100.0 36 .............................. TGATCGTTCGGACTGGCAAGGAATCAAGGTTACTAT 13449 30 100.0 38 .............................. CGCGAAGCATGGCAGACCGTTTAATGAATACGGTCTAA 13381 30 100.0 37 .............................. CTTGCCGAGATCACCCAGCAAAGAAAGCAAAAGGTGT 13314 30 100.0 38 .............................. GTAGAAGGTCTGAATGTCTTTTTCATTGAAACTAAGTC 13246 30 100.0 37 .............................. CCCATTGTGCTAATGCCGTGATTTCATCATCGCCTTG 13179 30 100.0 39 .............................. CACTTTCCACCGAAGATTGGAATGAACGGGTAGCACTGC 13110 30 100.0 38 .............................. TGGCGATGACGTATGCCGAACACAAAAGATGGGTGGAC 13042 30 100.0 35 .............................. AAGATCACCTTCCGCCTGCCGACTGGCTATGCCTC 12977 30 100.0 38 .............................. CACCTTGCATGACGAGCATTTCACACGACAGGTATGCG 12909 30 100.0 37 .............................. CAGCACAGTCCACCTTCGCCAAAGCAATGGTATCAAC 12842 30 100.0 37 .............................. AATTCATCTACAAAGTCAGCAAACGCAAATGCTTTCA 12775 30 100.0 35 .............................. CGGAAGTAAAACAAGGCAAAGAAGGCGTGTCCATC 12710 30 100.0 38 .............................. TCTGTCCTCCGCTTTGTTGGCTTTGTGGTTCCGTCGAC 12642 30 100.0 37 .............................. AGCTGATTTCCCGACGTTCAAGAGGATAGATGTTATC 12575 30 100.0 35 .............................. TATTGAACAGTTGGAAGAGTTGAAAACACATGACC 12510 30 100.0 37 .............................. CCTTGTATCGCGTTCTTTTTGCTCTCCGCTACCTTTC 12443 30 100.0 37 .............................. TACGAGTTAGCGCAAAATTATGCGCGTCTAATGGAAA 12376 30 100.0 35 .............................. TTGTAAAGGTAAAATACTTCTCTTTCGTTTTGAGA 12311 30 100.0 36 .............................. CGTTCTAAATGTCTTCCTAATACTATACCATTCAGA 12245 30 100.0 37 .............................. TGTACTGGATTCGGCGTGAGGCCGCAAATGTAATATC 12178 30 100.0 39 .............................. AGTGTCCGGTGCCATCTTCTCACTAAAACCGTAAAATTT 12109 30 100.0 39 .............................. TAATGTCTTCACCATTCATTGATCGGCTGATAAGTGTTT 12040 30 100.0 40 .............................. ATTCACCTTCTCCCTGTCCTGCGATGTAACCGTAGTTCTT 11970 30 100.0 38 .............................. AAGTAAAATTTAATAAAGGAGTTGGTAATGATGAAAAT 11902 30 100.0 39 .............................. TTTGAATGTAAAAAGATGACAAATGATATAGAACAAGGA 11833 30 100.0 36 .............................. TAGTATTCCATAAGTCATTCAGAGCAGAACCTATAC 11767 30 100.0 40 .............................. TATATATCTTTACATTTTTTTCTCATTTCTCTCAATGTCC 11697 30 100.0 35 .............................. ACTTTTGCTCGGAAGGAAAATATGCAAAAGTATAT 11632 30 100.0 37 .............................. GCCCTCACCTCCTTTCACTCCATAGTTAGCACCAAGC 11565 30 100.0 37 .............................. GCAAAAGCGCTAATCGGAATCAAAAAAACAGCAAAAA 11498 30 100.0 35 .............................. AAGCATATGCATTCACGATGGATTCTTTAATAGTG 11433 30 100.0 37 .............................. AATGCGTTTGGTGTGGTCGTTGGCATTCCAAACCATT 11366 30 100.0 37 .............................. CCGTTTTTGACCAAGGTATCGAAAGAAAATGGGAAAC 11299 30 100.0 37 .............................. GTTGGTCTGCTAGTCCGTCCCATGTATAGCGCTGCGG 11232 30 100.0 35 .............................. TTTTATCCATCATCATCTTTTGGAAGTCGGTCCGC 11167 30 100.0 38 .............................. CCGTTCACAACGGTTGTGGTATTCAGAAACGATTGCGT 11099 30 100.0 35 .............................. GTTTCTAACGTTTGTAAAAATTCATTGTAAAGTTT 11034 30 100.0 36 .............................. TCCAAAAGAAGTAGCACGTTTTCGAAGATATGCAAC 10968 30 100.0 39 .............................. TACAGTTCCGTGAGTTTGGCTGTTTTGCTCATACCGTCA 10899 30 100.0 39 .............................. TAAGTCTGATACGTCTTATACCTGTTCAAAAAACGCATC 10830 30 100.0 39 .............................. TCACCTCCTATAAAACAATGCCATCTGTATATGGTACAG 10761 30 100.0 36 .............................. CATTTTTGACATGATACATCATCGAAACTACCGATC 10695 30 100.0 36 .............................. TGAAGTTCGATTGGCAAATCACGTTTAAAATTTGCA 10629 30 100.0 39 .............................. CCATCATCAGCGTACAAGTTGCCATCTTGTACGGACAAG 10560 30 100.0 38 .............................. TATCCCTCATATCATCTTTTTTAAGGATAATAGGCTTG 10492 30 93.3 0 ...................T......C... | C,A,AT [10461,10465,10470] ========== ====== ====== ====== ============================== ======================================== ================== 61 30 99.9 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AGAAGGTGCGATTGCTATCCGCTTTTGTATAGCCATCTCAATGACACATAAGCGATAGATGCCGCAAAGAGCGGATTGTATATGGCTTGCTCGGTCGTGTCAAATTTAAAGTATTGCATTATCCAACGGAAAAACACTTCAATTGTCCAACGCTCTTGATACATCTCAGCGATCTTTTCTGCTGATGCGTCGAAAATGTTTGTGACGACATGAATGTCCTGATCATTCTCACTTGGGAAGGTGACGATACGGTAGTGTTTTTCTTACGTATGGATATTATTTACTAATAAACACGTACAATCGAATAGAGATTTTGTTCAATAATTCACAACTGTCGTCGACCTCCAATCTTGCAAAAATCCCGGGGGATCGACGACACTTTATTTTTTTCGGCAATTTCAGTTCTATCAACGGATTGAACATATTGACTGAATTTTTCTGCGATTGTATAATAGCCTTGTATATGATTTCCATATGCTGATTTATCAGCACTTTTTTGG # Right flank : TATTTCAGAATTACTTTTTCAAATTATTTTGGATGAAAATCGGAAATACAGCGCAAAATGTTTGCGAATTCTCTCGAATTTTACACGCTTTTTCCGATCCTTTGCACATTATCTCAGACGAACATTGGAAAAAGAAGGAGGCTGACTCCAAAAGTCCGCTAAAAAGCGGACTTTTGGGTCAGCCGCATGTCTAAAAAATGAGAGATATCCTTTTTCTTTATCTGATGGGCACGAACTGATGTATGGATAGAACGACTTTTAACACTAAACTTGACGGATATGGGGACAAGGACATCAAAGGGACGGCAGAAAATAACGAAAAAAGAAAAAGCCGATTTGATTTTTGCGGATACGGTAGCGATGATTAAGCCGAAGAAGGACAAGAAGAAAAGCTAAAAGGAATCAAAAAAGGATAAATAAGGGTAATATAGAAATATAAGGGGCAAAAAGCGGACTTTAGTTGGAGGTTGCCTTTTTGTCCCTTCGTAAAAGTAAATTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 26170-25941 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEP010000012.1 Anoxybacillus tepidamans strain DSM 16325 Ga0415324_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 26169 30 100.0 40 .............................. TCATCATTTTCTTGTGTATCTTTTGTATTGGTAACGTTCC 26099 30 100.0 34 .............................. ATCGACGAAGCGGGTATCATGTTCAACTCGAGGG 26035 30 100.0 35 .............................. TAAAACCGCTTTGCTAATCCTTTTCTAAATATATC 25970 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 4 30 100.0 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : CATCGCCCCCATCCAGTACAAGATTTCAAGATCGTCGTTTGTATCGTACCTATGAGGAATTGAAACTCTTTAACTGCAAGCAATAACTTAAATGCTGTCGATTTGTTTGTATCGTACCTATGAGGAATTGAAACAAATAAAACTCTCTATCGTGATCTGTAAAACCACTACCAAGTTTGTATCGTACCTATGAGGAATTGAAACATCCAACAATATCGTAATAAACACTACCAGCATATCGTTTGTATCGTACCTATGAGGAATTGAAACTTCCACGTTGGCAATTGGTTTTGGTCAAAAGGCATATTGTTTGTATCGTACCTATGAGGAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTATCGTACCTATGAGGAATTGAAACTACGGAGCGGTTGGATATGTAAAAGGTTGCGATAGTG # Right flank : AAGGCTACCTTAAAAGCAGGCAGACATCACGTTCTGTTTGCTTTTTTGTTTTCGCTTTATTTCATTAATCATATTATTCAGAAAAGTGTTGCATGCTATTTAGCGAATTTTGTATGATGAACATAAGGATATTTTTTGAAAAGGTGGATAGTTGATGAAATTGTTAACATTTCTCGGTACGAATACATATCAAGAAACCGCCTATCGTTTTCGCGATCGTGTGTACGTCGCAAAGTTTTTTATGTCTGTACTTGCTCAAGAACTTCAACCAGATTCCATTTGCGTATTTATGACGGATGGAGCGAAAGCGAAAAACGAAGGAGCTTTGTTCGATGAACTGAAACAATGCGGGATAGACGTAGCTAAAGTTCAAGCAGTACATATTCCAGATGGACAGACAGAAGAAGATTTGTGGCGAGTTTTTTCGATTATTGCTGATCAAGTGGATGAGAATGAGTCGATCGTTCTTGATATTACGCATGGGTTTCGTACGTTACCGC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 28646-26400 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEP010000012.1 Anoxybacillus tepidamans strain DSM 16325 Ga0415324_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 28645 30 100.0 38 .............................. ATTGGTAAAATAAAAATAACATCGACGTATAAAAAAGC 28577 30 100.0 37 .............................. TATTACAATTTGGACAAACCTGTCTCATGTTTTATCA 28510 30 100.0 37 .............................. ATATTCGTTCGATGTCTTTCGGATCATCAATAACACC 28443 30 100.0 36 .............................. ACTCATTCCATAGCAAAATTGTGGATAAGTTAATGA 28377 30 100.0 36 .............................. TTCAACGTGGTGAGCGCGGAATAGTCGCATTGCTTT 28311 30 100.0 34 .............................. TCGTCGTTCGGACGTAACTTTGCTTCCGCTTCTT 28247 30 100.0 38 .............................. CGGCGCTAGCAACGCTACCAATCCTTCTGCCGGATATT 28179 30 100.0 37 .............................. TTCAGGTCTAATTTCTTTCCCGCAACCGCAAGAGCAA 28112 30 100.0 39 .............................. CAAAACACTGTCAGACCAAATGATAAGAGACGGGTATTT 28043 30 100.0 37 .............................. AAAATGTATCAGAACACGGAAAAAGGCATCGTGAAAA 27976 30 100.0 36 .............................. AAAATCAGCTTGAAGAGTCAACAACCATTCATTGGC 27910 30 100.0 40 .............................. TGGGTTCAACAAGGATGGATAACAGCCACTCCAGGAGCGG 27840 30 100.0 38 .............................. ATCAAAAATTTGCTGTCTTTGGTCAGCTTGGCGACACT 27772 30 100.0 38 .............................. TTTATTTTGTTTATTTTAGATTTTTTTGATTAATGTAA 27704 30 100.0 37 .............................. TTCCATCTTTCCTGCGTTTAGCTTATATGCCACCTTT 27637 30 100.0 35 .............................. AAGTTTTGAATCGTGTAGCGGTCGCCTTTATACTC 27572 30 100.0 35 .............................. CCCATATTGGGCGCACATTCCCTTGTTTGTCGAGT 27507 30 100.0 37 .............................. AATAATCCATTCGTATGCGTTGTGAATGTCGGCTAAA 27440 30 100.0 39 .............................. TGCTTGAAAAGAGGTGTTCTGACGAAAATATGTTCTAAC 27371 30 100.0 38 .............................. CTCGATTGATTCAAGTAAACAACCCAATCCCCGATATC 27303 30 100.0 39 .............................. CCCAGTGACCTTCTTGCTCGTAATAATATTCAAGTTCGA 27234 30 100.0 36 .............................. TCTCTCCAACCTAATTGTTTCAAACTGAACACGGCC 27168 30 100.0 36 .............................. CGACTTGACTTGCAATTCTTTTCAGAAGAAACACCA 27102 30 100.0 36 .............................. AAATTGGCAGAAAAAGCTTGGATAATCGCAGAAGAA 27036 30 100.0 39 .............................. GTTTGGCTGCGTCATTGGTATTGTCAATGAACAAGTTTT 26967 30 100.0 36 .............................. TAAAAATGGCTATTGTCTATAATTTTGCTTCTTACT 26901 30 100.0 38 .............................. AAACGTACAATGAAGCATTTAACTATGCTATAGAAAAT 26833 30 100.0 38 .............................. TCGCTAACAATTACGCTATCCCTTACATAGTCCACTCT 26765 30 100.0 36 .............................. CTTTACGTTCCACTTTTAACATAATAAACAACCTCC 26699 30 100.0 36 .............................. CATCGCCCCCATCCAGTACAAGATTTCAAGATCGTC 26633 30 100.0 38 .............................. TCTTTAACTGCAAGCAATAACTTAAATGCTGTCGATTT 26565 30 100.0 40 .............................. AAATAAAACTCTCTATCGTGATCTGTAAAACCACTACCAA 26495 30 100.0 36 .............................. ATCCAACAATATCGTAATAAACACTACCAGCATATC 26429 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 34 30 100.0 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AACAGTGGATGGAAAGAAAAAAACGCAATTTTTCGATCCGAGCGATGAAGTATTTCTACATTTAATTGAACGAAATTTTCACAATAAATATGAAGCATATTACGGCGTTCCGCCAAGTGAGCGTCTGATGATCGAGCCTGTCGATGTTCGGAAAAACGACCGCGTCGTAACGAGCTTTAAAGGCTTTTATATTACGGCGTGGAAAGGACGATATAAGCTTATTTCATCGCCGGAAAATTTAACGTTTTTATACCGTGTAGGCATCGGCGGGCGAAACTCGCAAGGATTTGGCATGTTCCGCATGATAAAAGAAAAGTGAAACATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAATCCCGGGGGATCGACGACAGTTTATTTTTTCCGTCATTTTCAATGCTATCAATGGATTGAACATATTGACTGAATTTTCCCATGATTGTATAATGAATTTGTATATGATTTCCATGTGTTGATTTATCAGCACTTTTTTGG # Right flank : TTCCACGTTGGCAATTGGTTTTGGTCAAAAGGCATATTGTTTGTATCGTACCTATGAGGAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTATCGTACCTATGAGGAATTGAAACTACGGAGCGGTTGGATATGTAAAAGGTTGCGATAGTGGTTTGTATCGTACCTATGAGGAATTGAAACTCATCATTTTCTTGTGTATCTTTTGTATTGGTAACGTTCCGTTTGTATCGTACCTATGAGGAATTGAAACATCGACGAAGCGGGTATCATGTTCAACTCGAGGGGTTTGTATCGTACCTATGAGGAATTGAAACTAAAACCGCTTTGCTAATCCTTTTCTAAATATATCGTTTGTATCGTACCTATGAGGAATTGAAACAAGGCTACCTTAAAAGCAGGCAGACATCACGTTCTGTTTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 39239-37665 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEP010000012.1 Anoxybacillus tepidamans strain DSM 16325 Ga0415324_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 39238 30 100.0 38 .............................. ACAAATGAGGATATTGAATCGGTGTTAATTGGTAAAAT 39170 30 100.0 36 .............................. TGGATCGTTGAGAAGATGCGTGCTCGGTGCCTAGCA 39104 30 100.0 35 .............................. GCTGAAAACAAAATTGAGGAAGCAAAGCAACTGAA 39039 30 100.0 35 .............................. TTCTTTTCGTAGTTTGGCCGTTCTGTTTTCTACTC 38974 30 100.0 39 .............................. CTTTCGATTCGATAAGATGTAGTAATTTTTTAGCAACGC 38905 30 100.0 39 .............................. ATGCACTCTAACAATATAAAATCACTATTTTTAGCTTTA 38836 30 100.0 35 .............................. TAGATACATTTCAATTTCTTTGTCTAAAAATCCTT 38771 30 100.0 36 .............................. CTCGTTCCTGCTCGTCTTTTGACATTTGCCAATATG 38705 30 100.0 37 .............................. TAAAAATAACATCGTTTTAAACGCGCATAAACGGCTT 38638 30 100.0 37 .............................. ACACATCCAATCCACATACACGGACATGACTTCCGGA 38571 30 100.0 37 .............................. GATTTGGAACTGTTAGTGATGGGTAAGCGCTCCGGTC 38504 30 100.0 37 .............................. TCAAAATTGGGACACAATCAAGGCGAAAGCAATTGAA 38437 30 100.0 38 .............................. TAAGATATTTGCAGAGTTTGGGCTTCATTCGTGTTATG 38369 30 100.0 39 .............................. CTAGGACCCCGGCTTAAATTCGTAGACATAGATTCACCA 38300 30 100.0 38 .............................. TGATGAAGAATTGATATGGGATTTTATTAGAGAAGGTT 38232 30 100.0 39 .............................. TCTTCTGAATCGACAAACATTGCTCCTAAATATCCACCG 38163 30 100.0 37 .............................. AACCTATACCATCATATGGAGCAAAAACGATAAAAGG 38096 30 100.0 35 .............................. CGTAATGAGTACACAAGGTCCGAAAAGGTTTTTGC 38031 30 100.0 37 .............................. ACAATCTACTTTTAGAAAGAAATACTTCTCCATTGTG 37964 30 100.0 37 .............................. AACGCTCCAGTCGATTTTTTCTTTAATGTCACACTCT 37897 30 100.0 36 .............................. TGCCTTCCTTTCATGTTATGAAATCCCGTTCCTAGT 37831 30 100.0 36 .............................. CTTCCGTTCATCCGCGCTCCCACACGCTTTACCTCA 37765 30 100.0 39 .............................. CATAGTCCATGCATCCACCATCTCACTTGTGCGAATCAG 37696 30 86.7 0 .................T....T...TT.. | T,A [37670,37677] ========== ====== ====== ====== ============================== ======================================= ================== 24 30 99.4 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GCTTTGACCATATTTTTTTCACGGGAAGCGTACCGGTCGGAAAAATCGTCATGGCGGCGGCTGTATCAATGACACGATTATGCACATCGCCAACCCACATCTGCCATTTGGCGGCGTCGGGCAAAGCGGAATCGGCGCTTACCACGGCAAAGCAAGCTTCGATGCCTTCTCGCACTACAAAAGTGTCTTAATAAAACAAACGACAAAATTCGATATCCCAATCCGCTACCCGAACTTCCCAAATGCGCTGAAGTGGGTAAGGAAGTTGAGGGGGCTATGTACTTAAGAAAATGCATTTTCCTTCGTTTTTAAATAGTGAATATTTTCATATATGTCGTCGACCTCCAATCTTGCAAAAATCCTAAGGGATCGACGACACTTTATTTTTTCCGCCATTTTCAATGCTATCAACAGATTGAACATATTGACTGAATTTTCCCATGATTGTATAATGACTTTGTATATGATTTCCATGTGTTGATTTATCAGCACTTTTTGGG # Right flank : TATCACCACTTCTACATTGATGCTTCTTTTGTAGGTTTTGAGCTAAGAATTGCTCCCTTATTTTTTACTATAATTTCTAATTTCATCCTAATATTTAGACCGACACTTAATCATCCTCAGTTTTTGTTTCCTTCCAATCCATGTTTTTATGTCGTTGATTTCAAAAATTATCTTAATTAGAAGGAATATATTTCTTTTATGTCGTATTTTGTAAGATAGACCAGTTTATTTATAAGTGAGGTGGAATTTTGTTAGCTGAAGCGATTATTCGAGTCGGTAGACCGATTGCGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTGGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCATGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCTTTTCCTATCATT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 76854-82386 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEP010000009.1 Anoxybacillus tepidamans strain DSM 16325 Ga0415324_09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 76854 29 100.0 37 ............................. GTTATAGATCGGTTACTTGCTAAACATCGCTTGAAAG 76920 29 100.0 38 ............................. ATGCGGAAGAAGTCGAGCCAGTTATAGATCGGTTACTT 76987 29 100.0 38 ............................. TTCTTTTTGTTCTTGTTTTTTCTCCCATTCCTGAAACT 77054 29 100.0 39 ............................. AGAAATGTATTTATTGTAAGCACTGCAATCAGTATCAAT 77122 29 100.0 35 ............................. GAGTGTGAAAGGTTGCTTTTATTATTTTGACTAAA 77186 29 100.0 36 ............................. GATGTACATTTTGACATTGTTTTAGGAAATCCACCG 77251 29 100.0 38 ............................. TTAAAAATATCAAAATTCCTATCATTACTCTTAAGAGT 77318 29 100.0 37 ............................. ATCGATTTTATCACAATTACAACACGACAAAGAAAGT 77384 29 100.0 35 ............................. CATAAATTAAAAGAATATAACGGATTTCAAGAGCC 77448 29 100.0 36 ............................. GATGAATACGAAGCATACAAGCAACAATACGGTGAC 77513 29 100.0 36 ............................. CAAGGTAAAAAAGTGTTTATTTATCGTACTGACAGC 77578 29 100.0 36 ............................. TGCTTTAAAGTCTGAATATGTAACTGAATCGGAACA 77643 29 100.0 35 ............................. TACATTGATATTGATGATATTGAAACTTATGTCAT 77707 29 100.0 35 ............................. TTTGTTGAAGGTGAAATGTTTGTATGGTTTTGGTG 77771 29 100.0 37 ............................. AAAATGGAAAACAAATATCTGATATGGAGCGATTAGA 77837 29 100.0 34 ............................. CGTAAAAGATGGCTTATAGCATTAAGGCAAAATA 77900 29 100.0 37 ............................. AATAAATACTATATGAAGCCGTTTCCGATGAACAAAC 77966 29 100.0 38 ............................. CAATCAACACGAAAATTATAATCAATTGCCAACAAATC 78033 29 100.0 38 ............................. TCAGTAATAACACTGGTGTTGTCGCTACAGCGATTCAA 78100 29 100.0 35 ............................. ATGACGGACTGGCGTGATTTCTTTGAAGTTCGGAA 78164 29 100.0 38 ............................. GTGTCAGTATCCAGCACCTGTTGCTGATCGTCATTTTA 78231 29 100.0 35 ............................. CTATTTTTGTTTCTTTGAGTATGTTTGGAAAGTTG 78295 29 100.0 37 ............................. ATGTGGAAAGCGAAAAAGATTTTTAAGCTCGGTCTAT 78361 29 100.0 35 ............................. TTAGAACATTATACCGACTGGTACAAGGTAGCTGA 78425 29 100.0 40 ............................. CAGCACTATAAAGAAAAAGATCCGCGTACATTGTTGTATC 78494 29 100.0 37 ............................. TACAAGATTAAGACGCTAGCCGAGCGTGTGCCGTTTG 78560 29 100.0 37 ............................. CGCGAAGTTTATTTTCAACTTAGAAACGTGAAGCGCG 78626 29 100.0 37 ............................. TAATAAAGTTTTGCAGAGCGTCTTTACTTTCACGATA 78692 29 100.0 37 ............................. CGCTAATTAAGGTAGTCAGTAATGCGTCGTCATCCGT 78758 29 100.0 39 ............................. CATGAAACTATCGATAGTAAAGAAGGGAGAAACCTTTTC 78826 29 100.0 37 ............................. CAGAGCGAAATAAAGCGTCTAGCGAGGTGATAGGATG 78892 29 100.0 36 ............................. TAGGATGACGTTGACATTAAATTTAAAAAAGTAGCC 78957 29 100.0 38 ............................. ACGTATTGACAATGGCTTCTGTGCTGTCATTTAACAGT 79024 29 100.0 38 ............................. TTAGAAGAATTAGAAGGACTTGAGTTTGAACAGCTCGT 79091 29 100.0 37 ............................. CTTCCACCGCGCGGAACGTACACTAAACTGGCAAGTG 79157 29 100.0 35 ............................. TTCTGTGCCGATTCTTCTGTCGATACTCTCGCGTA 79221 29 100.0 37 ............................. TCCAGTACGTTCCGTTTGTTTCAAACATCGGCGTATA 79287 29 100.0 35 ............................. TGTCATTGAGTCTGTTAACCAAACATACGACAAAA 79351 29 100.0 37 ............................. AAAACTCTTCTGTCAGTTTCAATTTCTGGTGTATTTG 79417 29 100.0 35 ............................. AAATGACACATGAACATATCTGTATTTGGCCACCC 79481 29 100.0 39 ............................. TTGCTGGTATTTTGTATCCCGTTTCTTCAAACGTTCCGA 79549 29 100.0 36 ............................. ACATTGACCAACACAGCATCTTTTTCATCACCTTGT 79614 29 100.0 38 ............................. TAATTTTATCAATCGTTTCTTTCTCAAGCCCTAAACTT 79681 29 100.0 39 ............................. ATCAATTTTAACGTGTCACTTCGAGTATTCATGAATATC 79749 29 100.0 37 ............................. TACTCCACGCTCCCTTGGCCTTTCTTGGCGCCTTTAA 79815 29 100.0 35 ............................. GATGCCTCCCAGCTTTCAAAGTCGCTTCCAATAAG 79879 29 100.0 36 ............................. CACTTTTTGAAATGTCGGCGTGAACACTTCTGACAA 79944 29 100.0 35 ............................. TCGGTTGATAGAATGTCCTCTACATCACCGACACC 80008 29 100.0 39 ............................. TATAAATTCCCCCTAATCTTAATATTTTTCTGGGAAAAT 80076 29 100.0 35 ............................. TCGGTTGATAGAATGTCCTCTACATCACCGACACC 80140 29 100.0 37 ............................. CGATACACTTCAATCCGCAATGCAAAAGCAAGCTTGT 80206 29 100.0 40 ............................. ATACTTGAATACTTCCGGTAACTCGTTTGCTAATTCTCCA 80275 29 100.0 38 ............................. AATAAAAAAGCACCCCGAAGGATGCTAAATCCCTTTTC 80342 29 100.0 36 ............................. CGTTGTGTTGCTTTTGATCGTTGAAATGTCCTCTTT 80407 29 100.0 37 ............................. TTGCAATATTAGTTAGTACCGCACACCAGTCGCCTGC 80473 29 100.0 36 ............................. TGTAATCATGTAATGGATTGATCGCTGTCTCGAATG 80538 29 100.0 36 ............................. ATAACTCTTCTTCAAACGCAAGCAATATATCTTCAT 80603 29 100.0 37 ............................. ACTTGATACGTAAAACGTGATTTTACCTTGTATGAGC 80669 29 100.0 35 ............................. TGAATTACTATCTTCTCTAAGTTATGGTCATTATC 80733 29 100.0 36 ............................. TTGGAATTAAAAAAAGCCATCAAAGAACACAAATAT 80798 29 100.0 35 ............................. CAGTGAGTGGCAGATCTGTTGTAAAAGACAACAGC 80862 29 100.0 36 ............................. GTATTAAAGCAAATTCTACAATTAATTTAATAAAAA 80927 29 100.0 35 ............................. GTGTGAACGTGACTTTGCTCATCACTCTTCCTCCC 80991 29 100.0 36 ............................. AATGATAAACGATAAACAAAACGCAAATCATTCATC 81056 29 100.0 35 ............................. CGAATTGTTCATAAGTTTTTCTAATTCGCTTGTTT 81120 29 100.0 38 ............................. AAACGAACGGGAGAGTATGCCAAAACGTTCACGATTAC 81187 29 100.0 38 ............................. ACGAAAATGTGTAATAGGAGGAGATTTAAAATGTCATA 81254 29 100.0 36 ............................. AAGGGCCGGAACGGAGTGAAGGACTCGCGCAGCGAG 81319 29 100.0 36 ............................. ACATTTTCTTTAACATGCTCAATAAATTTATCTACT 81384 29 100.0 35 ............................. GCAACAGATCGCCGTATTTTGTTTTATGGTAAAAA 81448 29 100.0 35 ............................. TTATTCCCTACCTTTATTATAATGTATACATGTAT 81512 29 100.0 38 ............................. GAACGAATACAAGAATTCCAACCGGTCGCTGACGTTGA 81579 29 100.0 35 ............................. CGGAAAACTCATATGATCGCATATCAGAACTTTCA 81643 29 100.0 35 ............................. TTAGAGGATGATTTGACGGCAGGGAATTTAAAACT 81707 29 100.0 36 ............................. AGCGATTTTCGCAGCCGGAATTGATACGGGCACATG 81772 29 100.0 36 ............................. CAAGCAAAATTCGACTTGCAATGGCGAAAACAAGGC 81837 29 100.0 37 ............................. TTTCCTCGTAGTCCGTCACCCACGGTCCCGCGTTCGC 81903 29 100.0 36 ............................. ATGTAGAAGGGCTTCCTTCTACAGCCAAAGGCCCAA 81968 29 100.0 36 ............................. ATTGATATTGTGGAAGAACTGAATTTGTTAGTGTCT 82033 29 100.0 35 ............................. CGAAATACGGCTTTTGCAATTTTGATACTTTGTGG 82097 29 100.0 36 ............................. ATGCGCAACGTTCGGGGAAACATACGAACCTACCGG 82162 29 100.0 35 ............................. CCTTGTATTTCAATGACATCATTTGTTCCGGTTTC 82226 29 100.0 37 ............................. ACCGAATATGTCTGAGCGATTCATTGAACAGCAGTTT 82292 29 100.0 37 ............................. GCGGAAAAGACGCCTCTTTCGGTGATGAAGCTTGTCC 82358 29 75.9 0 .......C..............GAG.TTT | ========== ====== ====== ====== ============================= ======================================== ================== 85 29 99.7 37 GTTTTATTTGAACGTAGTGGGATGTAAAG # Left flank : GCATTTCATTGGCGATGAACCTTATAGACCATTGAAGGCATGGTGGTAATATGTTTGTAATTATTACGTACGATGTTGGAGAAAAACGTGTAAATAAAGTGTGCAAAAAATTAAGGGAATACTTAACATGGACGCAAAACTCCGTGTTCGAGGGGGAAATCACGAAAAGTTTGTTAATGAAATGTTTAAACGAAATTGATCAAATCATTGATGAAGATGAGGATTCCATTTATATTTACGAAGTGGCTAATCCAAAGAACATTAAGAAACAGGTATTTGGACAAGAAAAAAACTTTGACGAACTGTTTCTTTAACATTTGCAGTGAACCTATAATTTTAAAAAATGGGTCAAAATGCTTGATATATCAACGAAAAATGCGGTATTTTTGAAGAAGAAGAAAAACACAACTGGCACTTTACTGCAAAACGTAGAAAATTGTCATATCAACCATTCTCCAAAATCATTGATATGACAGTACTTTGTGCTTTTGGATTTTAGG # Right flank : TTTTGGCGAGGTATATAGAAACCTTTAGTTATTCACGTTTTGAAATTCACAAATTGTTCAAAACCTTGCGCCGGAGCTGCCCGTTTTTCCGTGTAAAATAAAAATAAAGAACCGGCGAGAGGGAGGAAATAGGGATGTTCGCAATGGTGATGGGGATTGTCATTACAGTATCAATTGCATTAATTATTAGCGCAGAAGTAAGCGTAGAAGCATAATAAGAGCGGCCTCTAAAAAGGGGCCGCTTTGTCGTTTGTGCACAGTGATTAGATGGCTTCCATGTGTGGAATGGTACAAGGGCGAATGGGCACATTATTTCTGTTAAGTGTTGTCGTTCTCTGCCTGAATAAGAATGCTTGTTGCAGTAGAGTGTTAGTTCATTCCGATGGTCGTCTTGACCGGATATCGATTGACATGGCTATTGCTTGCAGTAGATTTGTTGCTATGGCAATCTTGTTTTTAAAATGGCTAATGGTACTCGAAGTAATAGCAATGGACAAAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //