Array 1 430-3 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AELX01000004.1 Methanobrevibacter smithii TS95A Contig36, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
       429	    32	 100.0	    37	................................	GAAATAGGATGGTGGAATGTATTATTCTTGATTTTGA	
       360	    32	 100.0	    32	................................	AGCTTGGGATGTTTACCTGATGAGGATATGAG     	
       296	    32	 100.0	    34	................................	AAAATCATTCCATGATTTTGAGGAAAAATTCTTC   	
       230	    32	  96.9	    36	A...............................	AATCAATTAACTAAAATAACATCCTCCTTAAAAAAA 	
       162	    32	 100.0	    31	................................	AAGAAGAAGCAAAATCTGCAATTATTAACCA      	
        99	    32	 100.0	    33	................................	ATCATAAAACTGATTGCAGTATTCAATTTTCCT    	
        34	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
         7	    32	  99.6	    34	TGTTAGAAATAAGACTATAATAGGATTGAAAT	                                     	       

# Left flank :   AAGCTAGTGAAAGCGAGTTTAAGATAATTCATGATGGTTTAATGAAAATAATTGACACAGAGGTTGATTCAGTTATAATTTATAAATTAAGAATGGCTGATGTGATGAATCGTGAGGTTTTAGGTATTGAAAAAGCACCTATCGATGAAATTTTATAAATTTGATATTTTTAATTTTATTTAAACTGTTAGACTTGATAAAATAAATTTTAAAAGCTTTGTTTATCATATATTTTATGTTTTGATTATTTTTTAGCTATTTGAAAAATTTTGTTTTTTTATTATTTTTTTAAGTTTTATTTATTTAAATAAGTTAATTCTCTTTTAAATAGGTTGATATTTTATTTTATAAATTTTTAAGTTTTATTTTTTATTTTAAGTTATTTAGATTTGTTTGTTGATACATATAAATAAAAAACATTTTTTGTTATCGACAAATTTAAGTGTATGAATAAATAAATTATAAATTGTTTTAGCCCTTTTTGAGAAAAAAATGTGGCC
# Right flank :  TGA

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGTTAGAAATAAGACTATAATAGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [1.7-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.77   Confidence: HIGH] 

# Array family : NA
//


Array 1 136897-136731 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AELX01000003.1 Methanobrevibacter smithii TS95A Contig37, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    136896	    32	  96.9	    35	T...............................	TTCAAAACTCTTGGGACAACTTCTCTGCAGAGTAT	
    136829	    32	 100.0	    35	................................	GTACTTCACCGGACTCCATGCCTTCAGACCATTCC	
    136762	    32	 100.0	     0	................................	|                                  	
==========	======	======	======	================================	===================================	==================
         3	    32	  99.0	    36	AGTTAGAAATAAGACTATAATAGGATTGAAAT	                                   	       

# Left flank :   TAAGGATAATCCTGATACTCTGAAAGGATTTGCT
# Right flank :  TCATTTTGCACCTATTGATATATAAATTTAATGATGGTTAGAAATAAGGCACTGTCAATAACTTTGGTGATGAATGCCTCGGAAGTTTCTCTGCACCCAGTATTTGGTTTTGAGAGAAAATCTTGTCCTAGCTCCTTCAAAAGTTCTTAATGTTTTTTTAATATGCTTAGGGAAAACTTTTTGAAAGAAATTTTCAATTTTATTACTTGTAGTTGGAACATTACTATTTTCAAGATGAAATGTTATTGTTTTAAAGTAAGGAATGATGAAAAACCACAATAAATTAAAAATAACTTTCGGCAAATTGTTTTGTATACTAATAAGATAATCTCTACCTTTTTTTAGCAGATTCTAAATCATTAGCATCTAAAACATCAAAAACTAATTGTTTACAATAATTTAAGTATTCCAATTCTTCATCAGAATAATTATTTCTTTTCTTATTCTCCCTAATGTTCCTGTTTATCTTTTGTTTTGTGTGAAACATACAGAATTGATGT

# Questionable array : NO	 Score: 8.31
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTTAGAAATAAGACTATAATAGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//