Array 1 160526-158083 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000017.1 Streptomyces spiralis strain JCM 3302 sequence017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================= ================== 160525 37 89.2 37 .....A......T......A............A.... TGTGGCGTCACCCCGCTCGAGGCCGCAGGGCTGTCAT 160451 37 100.0 36 ..................................... CCCGGGCAGCGCGTCGGTATCTACACCAGCGCGGAC 160378 37 100.0 38 ..................................... TCCGGTGACGGTGTGTACGGCGACCCGACGGATACCGC 160303 37 97.3 35 ..................C.................. GACGCGCACGGGCCCCGCGGCGCGGCGGCCTGGTG 160231 37 100.0 36 ..................................... GCCGGGAACCCGGTCATCAACCAGATCGGCGTCAGA 160158 37 94.6 35 ........T................A........... GGCTACGAAGTCACGCACCTGAAGAACGGCAGCGT 160086 37 100.0 37 ..................................... CTCCAGCCCTTGTCGCAGACGTAGACCCGCTGAGGCA 160012 37 97.3 34 ........T............................ CACCTGCACCTGCACCTGGTGCCCCGCGCCGAGG 159941 37 83.8 34 ACT...................T..T........G.. TCCTGAGCGGCGTTGAACGCCTTCATGGTCGGGT 159870 37 97.3 38 ..................C.................. CTCGGCGACTACGAGGCCCGGGAGCGGCTGGCCCGGCA 159795 37 100.0 35 ..................................... ACCGCGCTGCAGGGCGCGTCAATCCCCGCGTCCAC 159723 35 91.9 39 ...........--.......T................ TCGTTGGACCACTCGACGTACCGAGCGACCTGCTTCTGA 159649 37 94.6 35 .................C..T................ GCTGAGATGGCGGCGTACAACCCGGAGAAGACCTT 159577 37 94.6 36 ............T............A........... ACCATGTACGCCCACAAGAAAGCCACCCAGCCGCGC 159504 37 94.6 35 ...................A..A.............. CTATGGGACGTGACCGTGTCGGAGGCGGGTGTCGA 159432 37 100.0 38 ..................................... GTCATCGGCTCCGACGGAGGCACCCCGAGCGCGACCAC 159357 37 97.3 35 ................T.................... TTGCGTGCGCGGTCGTACCGGCGGGTGGTGCGCGG 159285 37 100.0 35 ..................................... ATCTGGCACCACACCGGGGCCGCCGTCTCCAACGA 159213 37 94.6 35 ..........A...T...................... TACACGCGGGACTCGATCACCCACACGCGGGGAAT 159141 37 94.6 36 ...........T....A.................... GACCCACGCCGCCTGCTGGACACCAGCGCCGGTGCC 159068 37 100.0 37 ..................................... ACCACGATCATGGCGGCGAACCACAACAGCTACAAGG 158994 37 89.2 36 .C.............A......A......G....... GACGACCTCTCCGACAACGACCGCATCGTGCTGCGC 158921 37 97.3 35 ............................A........ GTCGTGCGCATAGGGGAGCGGTCGATCTCCTCCTC 158849 37 91.9 35 ..........TG................A........ ACCGAGCTGATCACGAAGGCGGACGACGACCCCGA 158777 37 97.3 37 ................C.................... GACACGGGCCCCGGCCCGGAGGACCTGGTGGACGGCG 158703 37 97.3 39 ..........T.......................... TACTGGCTGCCCGACGGAGTCAGCGTCGAGTCGCCTGGC 158627 37 89.2 36 .......C..............A.T...A........ CAAACGTCCGACTCGGCGACCATTGAGGTCGAGCTA 158554 37 89.2 35 C...................T.A.T............ TTCACAAAGACGATCCCTGGCTGGGCCGGGTCGCT T [158540] 158481 37 89.2 37 .....T.CT.T.......................... GGCGGTATCGCCGACTACGTCATCAGCATCGGCACGG 158407 37 91.9 105 ..........TT.........A............... AAGGCGCTTGGCCTGAACGCCGACGACATGGCGAAGTGGCGGTCGCCCGGGGCGGCCGAGGATCGGAACAAGGTGACGCTGGACCATAACGACGGCGGCAAGTGG 158265 37 100.0 36 ..................................... CCCATGGCCGCGCGCAGCGAACCGGAGAATGCGTCT 158192 37 94.6 36 .G............T...................... GACGTTTTCGCCAGCCACTGGAGCGACGAAATCGAA 158119 37 89.2 0 .......C.................A.......T..A | ========== ====== ====== ====== ===================================== ========================================================================================================= ================== 33 37 95.1 38 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : GTTCGGCATCACCCGCGTCACCCCCACCAAGCCGGAGGACCTCGCCAAGAAGGACACAGAGATGGGATCCAAGCACATCGTCCCCTACGGCCTCTACCGCGGCGAGGGCCACTTCAGCGCCCCACTCGCCGCCAGCACCGGGGTCACCAGTGACGACCTCGCCATCTTCTGGCGGGCCTTCACCCTCATGTTCGACCACGACCGTGCCGCTGCTCGCGGCGAGCTCAACCTCCGCGGACTGTACGTCTTCGTCCACGATGACAAGTTCGGCAACGCCCCGGCCCGCCAGCTGCTCGACCGCGTCACCGTCAAGGGACCGGGCGACGCCACCGCCCGCTCGTTCAGCGACTACCAGGTGGACGTCCATGACGCCGACCTGCCCAAGGGCGTCACCCTGACCACCTTGATCGGATGACCATCACACTTCCACAAGGCGGAGAGGGAGACCTACCTCAGATCTCCCTCTCCGCCCTGGAGCACTACGCCTACTGCCCAGGCGA # Right flank : GCCCGCAGCTGCTGCTCAGCCCACCACCGCCAACCGGGACGGCTGGCCCGCCCCTCGCCGCTACCGCATGCGATTCCGGTAGCCACCGCTCGCCGAACCGGTCACCGGATCATGCAGTGCCATCATGTTTCTCAGCGTGGGGGCGCGCAGCAGCGGAAGGAATCCTGCCGGTGGGACGCCCCGACAAGGCCGCGCGCGCCGCCATCGCACAGCGGCGAGCGGACGCCATCGACCTGCGCTTGGCCGGCGTGGACTGGCTCACCGTAGGCCGCAAACTCGCCGCCGACCCAGCCGTCAACTCCGACCGGGTCGCCTACCCGCAGGGCTACGGCATCGACCGGTATAACAAGGGCCTCGAACCACCCACCGACGACCAGCTCATTCACGCCGCCTGCAAGGACGTCCGCCAGGCCCTCAAAGAGCGCACCACCGAGCAGGAGGAGAAAGCCGACGAGCTGCGGGCTGTGGAGAACCTGCGCTTGGACCGGCTGTTCTTCGTC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-18.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 166900-167369 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000017.1 Streptomyces spiralis strain JCM 3302 sequence017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 166900 36 63.9 36 CT.GCAGT...GCTGC...G................ CAAGCCGCCGACCTCATCGCCGAAGGCCTCGTCGAC 166972 35 94.4 36 ...........G.......-................ ATTTTCAAGTAGTGTCAGACGCCACCATGTACCGGC 167043 36 100.0 36 .................................... CTGCGCTGGATGACGGGGGTCATGACCCTCGCCCTC 167115 36 91.7 37 ........G....T.....T................ CTGGTGCAGTGGTGTGGATCGTGGTCGGTGCCGTGGC 167188 36 94.4 36 ........G..................A........ GTGACCGGCACGCGCACCCTGGAGTCCGAGACCTAC 167260 36 97.2 38 .........................G.......... TACAAGGACATCTCTCACGTCGGCCTGTACGCCGGCGC 167334 36 91.7 0 ........G..GC....................... | ========== ====== ====== ====== ==================================== ====================================== ================== 7 36 90.5 37 TGGCGGTCCCCCTCCGGGGCGACCGAGGATCGCAAC # Left flank : CTGCCTTTGCCACCCCGCGCCTCGACAGCCTTGAGCTTGTCCTGCCAGGCGCACGCCCCCTTGCCCACGTCGTGTACCAGGGCCAGATACTCCGCCAACTCCCCGGCCCCGAACACCTCCCCGAAGCGCCGCGCCAGCGCAGCCGAGCCACGTAAATGATCCTCCAGCGCGTGCCGCACCCCCGAAACCCCACTCATGCTGTGCGCATACAACGCACCCCCCATAGTTGCCACTCCCTCCCCCTCCACGCCGGGCGGCGCCCTCCACACCACACCGTGGCCAAGACCGTAGCCGCCCTATCTGACATCAGCCGGCCAGTGTGCCGAACCAGTAGGCTCCAGACTCCGTGGCTCGTTCCGGGAGCGCCTTGCCTCGGAACCTCAAGTGGACACACGACACGCGGGTCGCACCGAAGCCGAATGTCCGTATTCAACGGCTCTGTCGCTCGCTGCTCGCCCACACAGCAGCGAGCGATACGCTGTTTCCACTGCTCAAGCAGC # Right flank : CGTCGTCTGGGAGCACCTGATCGGAATCCCTGGCCCACTGGCGGTCGTGATCAACAGAGCAGCACCGTACGGCCCGGCGGCCGACCGCGCGGGAGGCTGTGGATAACCCGCCCCGGGTCGCGGACCGTCAGCCGTGCCCTTAGACCAGACGTATGAGCAAGGACAGCGAACGGATCTACCACCCCGGCGAGATCGTCCCCGACTCGGGCATCTACGAGTGCGACTGCGGACAGCACCAGTGGAGCACGGACGTCAAAGGGCACCGCTTCCCGCCGATGCACGAGGGGTGCAGCGGCAGCGGCTGGAAACTGAAGGCCGCCGCCCACCCCAGCTGACCGTCCGGGGGAGCGGGATGGTCCTCCGCCCACCGATAGAGCCGATGTTGGCGCAGGCCCGCGACAGCCTGCCGCCGCCCAGCGCACTGCCCGGCGACCCGGTGTTCCAGCCGAAATGGGACGGTTCTCCGGACACCTCGGGATGTCTCATTCGGCCAGGTCTTT # Questionable array : NO Score: 3.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCGGTCCCCCTCCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 19011-18432 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000070.1 Streptomyces spiralis strain JCM 3302 sequence070, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19010 28 82.8 32 ........T....G-..AT.......... GACCTGCCGAGCAGCATGGCGAGGTCGGCCAC 18950 29 86.2 31 ..........G...A...A......A... AGGGCATCACGCAGGGCGACGACCTGAAGGT G [18941] 18888 29 100.0 32 ............................. CACCCGCCCAAGCCGCCCACCCGGCTCCAGCC 18827 29 100.0 32 ............................. AGGAACGCCCAGCCCTTCGGGCCAATCGCCGG 18766 29 100.0 32 ............................. CGGACGGTGAGGGTGACGCTGTCGTCGTTCAT 18705 29 100.0 32 ............................. GACGTCAACCGCGCCGGGCTCGGCGGCATGAT 18644 29 100.0 31 ............................. GCCCTCGACCCGATCGACGGCGTCGGCCCGG 18584 29 100.0 32 ............................. GAGAACTCCGTCACCAAGGCGGCCGTGGACAA 18523 29 96.6 32 ..............T.............. ACTGCCATCGGCGGCACGGGCTACATCGCCGA 18462 29 86.2 0 ..A...................G..G..G | CA [18447] ========== ====== ====== ====== ============================= ================================ ================== 10 29 95.2 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CGGTCCGCAGCATTCCGCCCGCGCCGGGCTCACCGCTGAAGACGCGCGGCACCCGCGTCGCCCATACCCGCCCCGAGCACGTGAGGACGTGGTTTTCGCACCGTCTGCAGCCAGCCGGCGAACCCGCGGTAGCCCCCAACGGTGTCACCCGCATCGGGGCCGATACGGACACCGAGCGACTCGCTTTGCGCATGCTCCCGCGAGTCTCCAGTCCGGCACCGCACAAGGGCCTGCGCATCGCTCGTGCGGAGATCAAAGGAACCCTCACGGTGACCGACCCGAAGACGTTTGTCGCCGCCCTCACCCAGGGCATCGGCCATGCGCGTGCCTACAGTTGCGGACTGATCCTCGTGAGGTAAACAGGGCAGAGCCTTCTGCGCGCGGTTCCGGCGCATCAACCGACAGTAATGGTTTCCCGTCATGGTGGGTGCCGGCGCAGCGGACTTGGCGAGGCTCGTGGGTGCGGGGTGGGACAGGGGGCCGTGCCTGAGCCGTTTTAT # Right flank : CCTCGGGCTCCCCGAACCACGCCCGCCGCTGGGCGCTTGTACCTCCTGGATATTGTCTGGCTGGGCTGAGCACGACTCCGCAAATCCGCTCCGACCGGGGTCGGCGCACCGGAGGAGTGGCATCAACTGACCAGATTCCTTCGGGCGGTGACTGGCCGGAGCCGTTCTTCTACGCGCACGAGGAGACAGACCTGGCCTGGCGGGCGCTGGAGGCGGGCTGGAAGGTGCTCTATGAGCCGGAGTTGGTGCTCCGGCATCCGTGGACGTCGCCGACCCGGCACGCGGTCTTCTACCGGATGGTGGCCCGCAACCGGGTCTGGCTTGCCAAGAGGCACCTTCCCGCCCTCCTCGTTCCCGTCTATCTGGGTATCTGGACCGCTGTGACCGTGGTCCGCACACGGTCGGCGGCGGGGCTGAGGGCCTGGTTCGGCGGGTTCGCCGAGGGCGTTGGCACCCCGTGTCCGCCGCGTCGGCCGATGAGGTGGTCCACGGTGTGGCGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 34911-34518 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000061.1 Streptomyces spiralis strain JCM 3302 sequence061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 34910 29 93.1 32 ..............T.............C TTGCCGGTCATCGGCCCCGTACAGGAAAAGGA 34849 28 86.2 31 ..CA.....-..................C CAGTGGGGGGATGGTGCCGCATCTCGGGGCG 34790 29 93.1 32 ............T...............C GCCCACTTCTACGGCGTCGAGATCCAGTACTC 34729 29 100.0 32 ............................. CCGCTGGTACTTCGACCTCTTGGGACTCGTCT 34668 29 89.7 32 G.............T.............C AAGGGCGTGCCCAAGTCCCGCCAGCTCGCCTA 34607 29 89.7 32 .................A...G......C GCCATAGCGAGCACGACCAGACACCGCGGCGG 34546 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 93.1 32 CTGCTCCCCGCACCCGCGGGGATGGTCCT # Left flank : TACGGCTCCCACCGCCTCAAGGAGATCCTGACGGAGCCGAACGTCGTCCATGCGCTGGCGCAGGCGGCCGCGGCCCTTCGCGAGGGGAGCGCGGTTGCCGCATACCGGGTTCTGCACGGAGCTGTCAGGGGACTGGGTCCGGCATTCTTCACCAAGTTCCTCTATTTCCTAAGCCTGGCGATGGACGTTCAGAGCGCCCCTCGGGCTCTGATCCTGGACCAGAGAGTTGCGCGCGTCCTGCGCGTTCACGCCACACGGGTCGGGCTGAGTATGGGGCTGGCGTCCGCGGCAGATGTCGCAGCCTGGATCTGGTCTGACAGTGGATGGACCCCACACCGCTACGAGGTGTACTTGCACTGGATGACTGCCGCAGCCGGACAGCTTGCATCATCTGGGATCGGGGGGCCTAATCCAAGCCCGGACCTGCTCGAACTAGCTCTCTTCCAGGGCGTTTGGGATCCGATGGCCTGAAAAAATCATGCATTGGGGTCTTCGGCCTG # Right flank : TGCTCCAGATTTCGCTCTTGCGCATCGGGTCCTGGCCCTACCCCCAGGTACGGTCCCAAGGTCAGGCTGCGAAGCCGACGGTGGTGACGTACTCGTATTGGCCCCACTGCGACCCGAGGTCGATGATCTGGTCCACCCACGCATCGTCCAACCCCTGATCATCGCCAGTTGACCAGGCCTGCACGATCTGGTCCCAGCGGCGCACGTTCAACGTTCGGAACTCCACGACGCGCTGGCGGGGTCGGTCGACCTGGGACTGGTTGAGCGGGTGGATCTCCACCCGGGTGCCGCGGCCCTCTCGGTTGAGGCGGGCGAGCAGGTAGCGGGCGACGTTCTCCCGCCGCACCGTGCGGTAGGCCTGCTCGATCCGCTCCAGGTTGGCCTTCGAGGGCGACCGTTTGCCGTCCAGCCAGGCTTTCAGGGTGCGGTCGGTGACGGCCAGGCCGGCCTCGCGCGCTCGCTGCTGGGCGTGGTCGGTGCGGGTGAGGTAGTGCAGGCGG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCT # Alternate repeat : TGCTCCCCGCACCTGCGGGGATGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 38057-35891 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000061.1 Streptomyces spiralis strain JCM 3302 sequence061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 38056 29 100.0 32 ............................. CACCAGCGGCCGGAGTACGGCGGCGAGTACCT 37995 29 100.0 33 ............................. CTCTCCCCGTACGGCTACAACGAGACGTGCGAC 37933 29 100.0 32 ............................. GCGGCGAGGTGTCCGCGAACGACATACGGGCC 37872 29 100.0 32 ............................. CATATGGCCACACACTCCGCCCGAGGCCTCGG 37811 29 100.0 32 ............................. GGCTGGGCGAGACGATCGGTATCAACGCCGCG 37750 29 96.6 33 ........................A.... GAGGCGCCGACCGCGCCGACCCTGAACGGAACG 37688 29 100.0 32 ............................. ATCAGCGCCCCTGCAGGGTCTTGTCGATCTGC 37627 29 100.0 32 ............................. GGCATCAAGGGCATGGGCGCGTGGCTACGGAG 37566 29 100.0 32 ............................. GACCAGCGGACCTGCAAGCCCTGCAAGGCCAT 37505 29 100.0 32 ............................. AGGTCCGGCCAGGTAGCGACCTCGCCGTCGAC 37444 29 100.0 32 ............................. GGGACAAGCAGAAGCTCTTGGAGAACACGAGT 37383 29 100.0 32 ............................. GAGGACACCGGCCAACTCGAGTACCCGCCCGG 37322 29 100.0 32 ............................. CCCTGACCAGCTCACCGCGTACACCGGGCAGC 37261 29 100.0 32 ............................. GAGCAGGGCGCCGGCATCACCATCGCCCAGTT 37200 29 100.0 32 ............................. TTTGGTAGGCGACGGATCAACACCTAGAGAGG 37139 29 100.0 32 ............................. GACCTGACGATGACCGAGATGGTGCGCCTGCA 37078 29 100.0 32 ............................. ATCCTCGACGAGCAGCACGAGCGGCCCGTCCC 37017 29 100.0 32 ............................. GACCACTGGCTCGGCTGCCCCACATGCCTCGA 36956 29 100.0 32 ............................. TGCTGCGTCTTGTCCAGGTTCGACGGACGCGC 36895 29 100.0 32 ............................. ACCTGCAAGGCTCTTCGCTGCCACTGCTCGTT 36834 29 100.0 32 ............................. TACGTCGGCGCCGACGCCTTGCACCCCACGGA 36773 29 100.0 32 ............................. GGCGGCGAGTGGATCGGCGCCGTTGTGCGCCA 36712 29 100.0 32 ............................. ATCTTGTATTCCCAACCCCGTTGCATGGTTAG 36651 29 100.0 32 ............................. TATTCTCGGTGACCTCCCGCCTGAACTGTGGT 36590 29 100.0 32 ............................. ACCACCGGCTACTCGGTCGCGCTGCCCGGCGA 36529 29 96.6 32 ..................A.......... GTGCCAACGCCGTTGGGGTCGATGGACGCCTT 36468 29 93.1 32 ...T......A.................. GGCGCCTCGCCGCGCTGAAGCGCAAGGTGCTG 36407 29 96.6 32 ...........G................. TACAGTGTCCGGGGGACAGTCATGCCCGAGTC 36346 29 96.6 32 ...........G................. GCCTACGAGGCCGAGGCGATGACCAGCACGGT 36285 29 96.6 32 ...........G................. TGGATCTGCGACCCGGACAGCTGCCCGGTCAG 36224 29 96.6 32 ...........G................. GAGTACATGGCGACGATCGACTTGGACCTGCG 36163 29 96.6 32 ...........G................. TACCTCAACGGAACCGGCACGGTGGAAGTCGA 36102 29 96.6 32 ...........G................. GGGGTCTTGTTGCGGCGGACGCAGAAGACCTT 36041 29 96.6 32 ........................A.... GCGTTGATGCCGTGCCACAGGTTGATGCCGGC 35980 29 96.6 32 ...........G................. GTGGGCCGGATCGACAGCATCTGGCGCGACGA 35919 29 96.6 0 ...........G................. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 98.8 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TCCCGATGTCGTGCACACCGGCCAGCCACACCACCAGCCGTCGCGCATCCACCTCCCCACCAGGCAGCTCGCCGGCGATCAGCCTCCGCACCGACAGCGGCAGCCACTCGTCCCACAACCGCCCGGCTACGGCGGCGCTGTCCTCCATATGCCGCCACAACGGCAGCCATCCGTCGGAATCACGCTCGTGCTTGGCCCATACGCTCAACGCCGGCCCGCCCAGCCGGGCGTGAAGCCCCAGCCGGGCGCCCCCCTCGCCTGTCATGCCAGATACATACAGGATGTAGATGAAGCGTGAAGCCAATATGAAGAAAGTCGGGAGAGCCCAGTGTCAGTCCAGAGCAGGCCGCCGACACTGACACAGAAACGAGCCTAAGATTTCGATCTTGGGTCAGGCCTCCGCGGCAGGAACCCAGAGGAACCATATGCACCTTTTGCCGGACTCGGCGAAACTCATGAAAACAACGCCCCCTGCACCGTAAACCTACAGGTCCCGCAGT # Right flank : GGCATTGATCATCCCAGCCGGCTGGACGGGCCCTGTCATGGAGGGTTATGGGTGCACTGGTTGCCGCGACGGATTGGCTGGCGCCTCTGCCGTGTCCTTGTCAGTGGCCACTGTCAGCATGGTCTAGAGCTTTGGACTGGGGGAGGGACGAGAGTGAGACGACAGGACCTCGCGGACGCACTGGACACCGAGTTGATGGAACGGCTACTGCCGGCGTCCGCGGTGCGCGCCGTAGACGGGTGGTTGTCCAGATCCGGCGCACCACACGTGTCCGGCGTCGGCGATCACGCCGTGGAGTACGTTCCCGTGAAGTGGGCCGGCATCGAGCCATGGCCTGACCAACTCTCTGTACAAACCCAGGCATCGGTCGCCGTGATCAGTCGTGCCCAGGTGGTGGCAGCCGCGCGAGCGGCGGTTGAACGCGGAGACTGGCATGAGGCTCTGGTTGCCTCGTACGTGTGGGGGCAGGGCCGGACCGGGTACGGCTCCCACCGCCTCAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 46947-47219 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBC01000061.1 Streptomyces spiralis strain JCM 3302 sequence061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46947 29 100.0 32 ............................. AACGGCCTGCTGGACACCGGTGAGACCTTCCT 47008 29 96.6 32 ...........A................. ACCCGCGACGGCGGCCCCTACAACCTGAACTG 47069 29 100.0 32 ............................. TGGGCCGCAGCCGGGATCGGGCAGACCGGGCC 47130 29 96.6 32 ..............T.............. TTCGCTCTCACCTGGACCGACCCCGACGGGCA 47191 29 93.1 0 .............G...A........... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.3 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : ATCGGCACCCTCCTCCTCGGACCCGGCACCCGCATCACCCACCAGGCCATGAGCGTCCTCGGCGAAACCGGCGCCGCCGTCTGCTGGGTGGGGGAACAGGGCGTGCGCTACTACGCCGGCGGCCGCGCCCTGACCCGCTCCTCCGCGCTCGCCGAAGCACAAGCCGCGCAGTGGGCCAACATCCGAAGCAGGCTCGCCGTCGCCCGCGCCGTGTACCGACTGCGCTTCCCCGACGAGGACCCCGCCAGCCTCACCCGCCAGGAGCTCCTTGTCGTGAAGGCATACGCGTCAAGGACTGCTACCGGGCCCAGTCCGCCCGCACCGGCGTCCCCTGGCGCGGCCGCCGCAACACCCCTGGCGACTTCACCAGCGGCGACCCGGTCAATCGGTGGTCACCGCTGCCGCGCGTGTACGGCATCGCCCACGCAGTCGTCCTCCCTCGGCTGCGGCCCCGATGTGCCTGGGCTGGGCTCCTCAGGTGGGCGGACGGCGCTGTGGAG # Right flank : CGACAAGGCCCTGCCGGCCGCGGTCAAGTTCAGGTGCTCCGGCCCGCCTGCTGGCGGCCGAGGCAGGGCACCCCATCGGGCAGGCTGCGCAGCGCAGGATGGAACAGACCCTGCAGGCGGCTCTGGCCGATCCGGCGGCAGCGGAGAAGTGGTCCTCCGGCCGACTCGTCAGAGCCCTCGCCCCTCCCATCGGTTTCACCGCGGCTACGGCCGCGGTCAACGAGACATCCGCCCGGCCGGCTGCCGACCCCCACCGGGCGCGCGCAAAGGAACCGCTGTCGAAGCCAGAACGCTCCGACGTCGCTCTCGCCGGCAAGGCCATCCGCAGGCACCGCCACACGGACGAAGCGAGAAGGAAGCCGGCGCAGGCGCAGCGGGAGGCGGAAGCAGCCGAGCACTACGCCCGGCAACGGGAGGAAGAGCATGACCAGGCCCAGGCGGAGGTCGAGCGCGCCGAAACCGCCTTGCGGGAACTCCAGGAGCGCGCGACCGAGCTGGCT # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //