Array 1 49582-50769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JEOG01000017.1 Bifidobacterium sp. UTCIF-39 contig00017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 49582 36 100.0 28 .................................... GCATCGCGCAGCACGTCCTCACGGCTGG 49646 36 100.0 28 .................................... TATTGCGGTTCTTCGGTTTGCCGCATGT 49710 36 100.0 28 .................................... CGTACCTATGTCGTAGAGAATGAGGCCC 49774 36 100.0 28 .................................... GGGTGACGCCGTTCACGCTGGCCGTCGG 49838 36 100.0 28 .................................... CGGCAGGCGGATGTGGGCGGTTTCCTGT 49902 36 100.0 28 .................................... CCTGCTGCGCCAGACGGCCGGCGGGATG 49966 36 100.0 28 .................................... TACAGGTACCGTCCGTACACGCACACCT 50030 36 100.0 28 .................................... GGATATCATCTGTCAGTCGCGTAAATGC 50094 36 100.0 28 .................................... GAAGACGGCGACGACCGCTGTCACGGTG 50158 36 100.0 28 .................................... GTAGACCTAGAACCTCAAAACCTGTATA 50222 36 100.0 28 .................................... AGATCGACGAGTTTGCGCAGAACGTTGG 50286 36 100.0 28 .................................... GCAAAAGAAAAGGCGCAACCCCCGGAAG 50350 36 100.0 28 .................................... CCTCGCGCGCATCCCCCTATCGATCTTC 50414 36 100.0 28 .................................... CTCGATATCGAGACGTGTAAGGTGATAG 50478 36 100.0 28 .................................... AAATCGTCGAACGCGTCAGCCACACGCC 50542 36 100.0 28 .................................... ATTCTCAACGCGACATCCAACGTCATAT 50606 36 100.0 28 .................................... GTTGGGGCTTAGGTGTTTCAACAGTTCA 50670 36 100.0 28 .................................... ACCGGTTGGTTGGTTGGATGTATGACGT 50734 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 19 36 100.0 28 CAAGTCTATCAAGAGGGGTGAATGCTAATTCCCAGC # Left flank : GTTCAATGGCAGTGGTTTGACCATACCGAGTTCCTTGAATGACTTCTCCCAACAATTTGGTCTGTACTGCGAAAAGAAGATCGATCGATTGCCGGTACCTGAGTATGTGGGTGTGCCATGAAGACGGATGAGGATAGTGGTGGCATGTGGTGCTTGGTCATGTTTGATCTTCCTGTGAAGACAAAACGTCAGCGAAAAGTTGCGGCTGACTTCCGTAATCTGTTGTTGGACATGGGATACTGCATGGTGCAGTTCTCCGTGTATGCTCGATACACTCCGACTCAAGCAGGTAACCGTGCAACGGTCCGTGCCATTAAGGAGAATCTGCCGTCTAAAGGTATGGTCCGCATTCTGCACATCAGTGATCATCAGTGGTCGTCAGCTTTGCGATTTTCCAGTATGCAGAGGGATGAGTCTGAGGAAACGCCTGATGTCTTCACGCTTTTTTGAGCGTAGGATCCCCTGAAAACCTTGAAAAATAGCCCCTCTTGACTGGCTAT # Right flank : CTTTAATCATCAAAGCAGGCTATCAGTGAGGATAGCAGAAATCTCGTCAATGTTATAATCGAACAGATGTTTGAATGACGGAGGTGTGATGATCGGCGAAACGACACGTGAGACGACAAGGAACGCACATCGCACCTACATTGCCATTGATCTCAAGTCGTTTTATGCGTCGGTCGAGTGTGTGGCGCGGAAACTGGATCCACTGACCACGAATCTGGTGGTGGCGGACGTGTCGCGCACCGAGAAGACGATCTGTCTGGCGGTGTCGCCGTCGCTCAAGGCATACGGGCTGCCCGGTCGTGCCCGACTGTTCGAGGTTGTGCAGAAAATGCGGCAGATCAACGCGGATCGTCGTCTTCAGGCACCGGGAAAACGACTGGTCGGCGAATCGGTCAACGCCAACGAACTCGCCGCGAACCCGAATCTTGCCGCCGGATACATCGCCGCCAAACCGCGCATGGCCCACTATCTTGACTGCAGTGCCAAGATCTACGGCATCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAGGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //