Array 1 31467-33986 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLET010000002.1 Clostridium perfringens strain GY-97 NODE_2_length_483836_cov_204.503062, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 31467 29 100.0 36 ............................. AAATGCTAACTTAGGAGTTTTACAGACTAAACAAGT 31532 29 100.0 36 ............................. ATAAGTATGAGTATAAAAAAAGTAATAAAAACAAGT 31597 29 100.0 38 ............................. TAAGTTTTTAATTATTATTTTAGTTCCATAACTTTTGT 31664 29 100.0 37 ............................. TTTTCTGAATATTGCCATATAGCACAATCTCTATTAA 31730 29 100.0 36 ............................. TCTAAGTTTGCACCTGTTAAATTTGCAAAAAATATT 31795 29 100.0 36 ............................. ATAATAATTGTTTCTTCATTTTCTATAGAATCTTTT 31860 29 100.0 36 ............................. TATGGTAGACCAAAAGGATTTGATGGAGATTACAAT 31925 29 100.0 36 ............................. ATATTAACGATTAAATCTAATGGTTCTTATGGTCCT 31990 29 100.0 37 ............................. AACTCTGATAATTTACTATCTAATTCATTTCTAAATT 32056 29 100.0 36 ............................. AGGTTACTATTTTGATTATTCACTTTTTCTCTATAA 32121 29 100.0 38 ............................. ATATCTCCCTTTTTCCCTTGTTCACCTTTTTCCCCTCT 32188 29 100.0 37 ............................. GAAGAAATAAAAGAAGCAGTAAATCAGAATAGACAAC 32254 29 100.0 37 ............................. CTTTCTAACTCTTACTTTTCTTCTTCTAGTTTGGGTT 32320 29 100.0 36 ............................. ATAAATGGGATTGTGAATGTGTTGAAGCTATGACAA 32385 29 100.0 36 ............................. TGCATCATTTGGATTAATTGCATTGGATTGAAATTA 32450 29 100.0 37 ............................. CTAAAATATCTAAAGGTAAATATTCTTACTGTTGTTG 32516 29 100.0 36 ............................. TTAATTGAATAAGTTGTTTCATGTCCACTAAATTCT 32581 29 100.0 36 ............................. AAAAGTTGTACTGTATTCATAATTTTTCTCCTTATC 32646 29 100.0 36 ............................. ATATACTTCAAAAAGGTGTTCTAAATGTGGCAATAT 32711 29 100.0 37 ............................. TTACGATAACAAAATGTAGTGCCATATGGTATGGGCT 32777 29 100.0 37 ............................. TCATATCTAACATATCCATCAGAAGGAGTTCCATTTT 32843 29 100.0 37 ............................. GTTCTAGCATCATAATATAAAGATTTATCTTTCCCCA 32909 29 100.0 37 ............................. ACTCAAAAGAAAATCTTAGAACTTGAAAAGAAATTAG 32975 29 100.0 37 ............................. AAAGGAATATCAGATTGTAGTAGTATATCTGCTTTCA 33041 29 100.0 37 ............................. CTTGTAAAAGTGTTTAATATTTACAAGTTGAAAGATA 33107 29 100.0 36 ............................. AAAAATCTTTGGAGCATACCAAATGAAGAAGGTATA 33172 29 100.0 36 ............................. ACGCAAAACCAATTCTCATCCTCTAATGAAACATTA 33237 29 100.0 36 ............................. GCTTCAATTCTATCTGTTACATAATCACAAACAAGA 33302 29 100.0 36 ............................. GTTTCTACTATTTCTACTTCTAAAGGAAATAGTAAT 33367 29 100.0 35 ............................. AAAGTTTATTATAAAGGAAACGACTTGCAAGATCT 33431 29 100.0 36 ............................. CCGACTACACTAGGAACATCAGTAGGAACAGAACCA 33496 29 100.0 36 ............................. TTGTATTCTTCATTTAACATAATTTTAAATTCTTGT 33561 29 100.0 36 ............................. TATAATGACTTCCAATTAGAGGAAGGAACTCAATCA 33626 29 100.0 37 ............................. TATTTCTACTATAATTAACTCTTACGCCATAATCTCC 33692 29 100.0 37 ............................. ATTTATTAAAGATACTTTCTTTGGTGCAGTTAATAAG 33758 29 100.0 38 ............................. TTTTTAGATGCATAGTTTAAAGTATCATATTCTAGGTC 33825 29 100.0 37 ............................. TATCTCGAACATAATTCACCTAATGGCAAACCCACTT 33891 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 33957 29 86.2 0 .................GAA....C.... | C [33984] ========== ====== ====== ====== ============================= ====================================== ================== 39 29 99.6 37 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : TATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGCTATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTAAATCTAATAATCTATGTATTTAGCAGTTTACAGCTAATAGCTCCCTTGAAATTTCCTCAAACCTTTCATTAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //