Array 1 750441-749950 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000002.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 750440 30 100.0 36 .............................. ATATAATTGCGTTCAGTAAATCGTACCATCCTGTGT 750374 30 100.0 35 .............................. CACATTGGTGGACTTAATGCAAGAAGAATGTTTGA 750309 30 100.0 36 .............................. GCATATAAATCATTGCCCATACTAAGCATGAAGTGA 750243 30 100.0 35 .............................. AAGTAATAGTCCTAGATATGAAATACATAAAAATA 750178 30 100.0 36 .............................. TTAATTTGATTTATAACTTTGTTATTTGCATCTCTA 750112 30 100.0 35 .............................. AAGAACTACTGATGCTTGATAGAGAATTAAGTTTT 750047 30 96.7 36 ................A............. CACGTTGCTTTACAATGATAATAAGGTCTTTCTAAA 749981 30 90.0 0 .C..............T..........T.. | TA [749955] ========== ====== ====== ====== ============================== ==================================== ================== 8 30 98.3 36 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : CTAGGCAATACTGAAAATATTCATGAAACTTTAATAAAGATTTTATCCAATAAAGCAATCTTTGGTGTTGATTTATATGAAGTAGGTTTAGGTGAAAAAATTGAGAACTACTTTAAAGAATTAATTGCTGGAGAAGGTGCTATTCGTTCAACCTTAAAGAAATATTGTAAATAATTTATATGCAAAGCGCTGAAAAATTTGTTTTTCAGCGTTTTGTATTTATTAATTGGAAATATTTTTTTTACTATTAGCATTACAAAAAATTTTCAATTAAGATTTTTATAGAGCAGCAACCAAAAAAGAAAAATCTATTTTTATAGCAATTTTACCAAGTGAATTGAAAAACAAAAGTAGTGTAACCTGAGTTATATCAGTGGTTTATATAGGAATTTTTATAGAAATTTCTATTTTATAAAATCACCTGGTAAATTTTCTAAGAAACCTTGAGATTTCAATGGTTTTGTGCTATTCTTAATTTTAAGGAATGTTGATTTTACAGT # Right flank : ATAGAAAAACTTCTGTATCTATGAAAAGATTAGAAAGTTTTTTGATGTATTGAGGTAAATAGAATAAAAATGTTTAATCAATCTTCCGCTTTTATGTGCTATATAAAAGCGGGAATTTTTACTTTTGGAGAGATTTTGAATTGTTGAAGTTAAATGCTGGTTTTAAATTAATGATTAAGCACATAGATTTATTACTTTGAAATTTTACATACTATTGTGTTATGTTTATAATAATTAATACGAAATTAAAAGAAGTGGATAAGTAGCTGGAAAGGGAAGATACAATGGATATAGTAAAAATAAAGGAAAAACTTAATTCAAATGAATATGATTTTTTAAGAAATAATTATAATTTAAATAATAATATAATATTGCTAACTTTAGGTGGAAGTTATTCTTATGGACTAAATAGTGAAAATAGTGATCTGGATATAAGAGGTATAGCTTGTAATACAAAAGAAGAAATATTAACTATGAAGTGTAGGGATAAACCTTATGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 282184-282477 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000009.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 282184 30 100.0 37 .............................. GCCCTATTTTTTCTCCTAATTCTTGTTGTGTTAAATC 282251 30 100.0 36 .............................. ATCACTTCTATTGAAGAAACTAAGAACAGTAGAGCT 282317 30 100.0 36 .............................. TATTGTATATTAGAATTGTTATATAATCTTTGTATG 282383 30 100.0 35 .............................. TGTTCAATAAATCCTTCTATTTCACCTTTTATTAT 282448 30 83.3 0 ...............GA.........TC.A | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.7 36 GTTAAACCTTAACATAGGATGTATTTAAAT # Left flank : TGAAAGTTGAGAATGGAGAGTTGAGAGTTGAGAGTGAATAAAAATTTTACTAAGGAATTTGGTATTTTTTATAAACAGAGTTCTTGGCTTCAGAAGGAGTTTTTACTCCCACTGAAGCTTTATTAACAGAATTCTTAGGAGTTTTACTCCTTAGAAGTCGTTATCCTTTAGGGGAAATCGTTATCCAGGGATGTAGCCGCTCTTTACTCCCACTTTGAAGAAAAGCAGAGAACCCAAATCTTTGATTTGGTGTGAATCGCTTTCACAGAGTGCGATGGGAGTATTAGATCGGGTAGTCATCGGATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATGATGTCAGTGTTTTACATAGTATTTTCTATAGAAAATTACATTTTACAAAATCACCTGGTAAATTTTTAAACAAACCTTGAGATTTCAATAGTTTTATGCTATTGTTAATTTTAAGGAATGCTGATTTTACAGT # Right flank : AGCAATTGAAAGTTGAGAATTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAGTAGCAGATTATTAATTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATAATGTTAGTGTTTTACATAGTATTTTCTATAGAAAATTATATTTTACAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTATATGCTACTATTAATTTTAAGGAATGCTGATTTTGCAGTGGTTGAACCTTAACATGGGATGTATTTAAATTGATTATGTGGCTGATATGAAAATGGGAGATTTTAGGTTGAACCTTAACATGGGATGTATTTAAATTTGCAGTAGGCGTAGCTGCTAAAGATATGGGTGGCGGTTGAACCTTAACATGGGATGTATTTAAATAAGATTAATTCTAAGAGCAATGGCAAGAAATCAGGTTGAACCTTAACATGGGATGTATTTAAATTCCTGTATATAATAT # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 282735-283092 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000009.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 282735 31 100.0 35 ............................... TGATTATGTGGCTGATATGAAAATGGGAGATTTTA 282801 31 100.0 35 ............................... TTGCAGTAGGCGTAGCTGCTAAAGATATGGGTGGC 282867 31 100.0 33 ............................... AAGATTAATTCTAAGAGCAATGGCAAGAAATCA 282931 31 100.0 33 ............................... TCCTGTATATAATATTTAAGGCAGTAGTTGTGG 282995 31 96.8 35 A.............................. CTGGCGAGCTTAACGTTAAGCTCGGAACGGTAGTG 283061 31 90.3 0 T..........................C..G | T [283084] ========== ====== ====== ====== =============================== =================================== ================== 6 31 97.9 34 GGTTGAACCTTAACATGGGATGTATTTAAAT # Left flank : CTTGTTGTGTTAAATCGTTAAACCTTAACATAGGATGTATTTAAATATCACTTCTATTGAAGAAACTAAGAACAGTAGAGCTGTTAAACCTTAACATAGGATGTATTTAAATTATTGTATATTAGAATTGTTATATAATCTTTGTATGGTTAAACCTTAACATAGGATGTATTTAAATTGTTCAATAAATCCTTCTATTTCACCTTTTATTATGTTAAACCTTAACATGAGATGTATTTTCAAGCAATTGAAAGTTGAGAATTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAGTAGCAGATTATTAATTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATAATGTTAGTGTTTTACATAGTATTTTCTATAGAAAATTATATTTTACAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTATATGCTACTATTAATTTTAAGGAATGCTGATTTTGCAGT # Right flank : GCGATTGAAAGTTGAGAACTGAGAGTTGAGAGTGAATAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTAGATTAAAGCTAGTAATGTCAGTGTTTTACATAGTATTTTCTATAGAAAATTACATTTTACAAAATCACTTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTTTGTGCTATTGTTAAATTTAAGGAATGCTGATTTTACAGTGTTAAACCTTAACATAGGATGTATTTAAATTCTTATCCAAAACTCCTAATGATTTTGCCATGCTAAGTTAAACCTTAACATAGGATGTATTTAAATTGACAATCAAGTAAGAATATTGGGAGTGATTTTAGTTAAACCTTAATATAGGATGTATTATTTAAATGAAATAGATAATTAACGGCAAAAATAGGAAAAGTAGATTGAACAATATGAAGTTTTTTACATTTATTTAATGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 285604-286278 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000009.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================= ================== 285604 30 100.0 36 .............................. AATGAAAGATAGATATAAAGACGGGTGGGAAGATAT 285670 30 100.0 35 .............................. GATAAGCCAGTATTGGTTGCAGATGTGAACCAATT 285735 30 100.0 35 .............................. GAAGCGGCTAACGAGATAAGATGGTTTAAAAAGTG 285800 30 100.0 36 .............................. CAACGTATGTAAAGTACATTTGTACGCTAAATTTTA 285866 30 100.0 36 .............................. TCTGTGAGGTACATTGTACACTCACCTTTAAATATT 285932 30 100.0 36 .............................. TTATGTCATTAGCTGTTAACTTAGGCTTGTATAGCT 285998 30 100.0 35 .............................. GACATATCAATCTCGTCTTTAAAAAAATAGGTCCT 286063 30 100.0 89 .............................. AAAAAATAAAGCTATGGGAGAACTTCTTAATAAAGAGTTGGATGTATTTAAATTTGTTTTCGTTGCTACATAGTGCGTAGCTAGTAACT 286182 30 100.0 36 .............................. TACCTCCCAATATTTGTAATTAAATTCTAAGTTTTA 286248 30 93.3 0 ..........................C..G | T [286271] ========== ====== ====== ====== ============================== ========================================================================================= ================== 10 30 99.3 42 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AACATATATATGCAGGTTTAACCATAACATGAGATATATTTAAATTAATAAACAGCTAGAAATAAACAAACTCACATAATGTTTAACAATAACATAAGACGTATTTTCAAGTAATTGAAAGTTGAGAGCTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTGTAAACAGAGTTCTTGGCTTCAGAAGGAGTTTTTACTCCCACTTTGAAGAAGAGCAGAGAACCCAAATCTTTGATTTGGTGTGAATCGCTTTCACAGAGTGCGATGGGAGTATTAGAGCGGGTAGTCATCGGATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTGAAATAAAGCTAACAATATTAGTGGTTTGCATAGTTTTCTAACAGGAATTTTTATTTTATAAAACTACCTGGTAAATTTTTTGGCAAACCTTGAGTTTCCAATGGTTTTATGCTATTGTTAATTTTAAGGAATGACGATTTTACAGTG # Right flank : GTAATTGAAAGTTGAGAGTTGAGAGTGAATGAAAATTTTACTAAGAAGTCTCCTATTTTTTACAAATGGCAGACTATTAATTTTACCAGGTGGATTGAAAAGTGAAAGTGGCTTAAAGTTAATGATACAAATGGTTTGTGCAGTGTTTTCTATAGAAAATTGTATTTTATAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGTTTCCAATGGCTATATGCTATTATTAATTTTAAGGAATGCTGATTTTACAGTGGTTAAACCTTAACATGGGATGTATTTAAATTATAAGAAATTAACAGGTAATTGGTAATTTCTTATAGTTAAACCTTAACATGGGATGTATTTAAATTGTAATGATTCATGAGGGTTTTTATTTACTTAAGTGTTAAACCTTAACATGGGATGTATTTAAATGAAACTAAGGGACTACCTGATACCAAAATAAAAGAAGTTAAACCTTAACATGGGATGTATTTAAATTAGGTATTATTAATG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 286536-287226 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000009.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 286536 30 100.0 36 .............................. TATAAGAAATTAACAGGTAATTGGTAATTTCTTATA 286602 30 100.0 35 .............................. TGTAATGATTCATGAGGGTTTTTATTTACTTAAGT 286667 30 100.0 36 .............................. GAAACTAAGGGACTACCTGATACCAAAATAAAAGAA 286733 30 100.0 36 .............................. TAGGTATTATTAATGGCTATACTCCTATATTTAAAA 286799 30 100.0 35 .............................. TATTCAACCCAATGGACAAACCAAGGAAAATATTC 286864 30 100.0 36 .............................. CAACGTGCATCTTTGTATAATAACAATATGCAACCT 286930 30 100.0 36 .............................. ACAAAATCCTAGTTGGAAATTCTTATATTCGGAGAT 286996 30 100.0 36 .............................. TTTATATTTACCTCCTAATTTTTACTTAATCTGTGT 287062 30 100.0 37 .............................. TGTAAATCTCTGCCAGCCCTTACTCTAAAGAAAAAAC 287129 30 100.0 35 .............................. GTGGGTGAAGACAAATTAAAAGATTTTAAAAGAGT 287194 30 90.0 0 ...G...........A....T......... | ATA [287214] ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.1 36 GTTAAACCTTAACATGGGATGTATTTAAAT # Left flank : AATCTCGTCTTTAAAAAAATAGGTCCTGTTGAACCTTAACATAGGATGTATTTAAATAAAAAATAAAGCTATGGGAGAACTTCTTAATAAAGAGTTGGATGTATTTAAATTTGTTTTCGTTGCTACATAGTGCGTAGCTAGTAACTGTTGAACCTTAACATAGGATGTATTTAAATTACCTCCCAATATTTGTAATTAAATTCTAAGTTTTAGTTGAACCTTAACATAGGATGTATTTTCAAGTAATTGAAAGTTGAGAGTTGAGAGTGAATGAAAATTTTACTAAGAAGTCTCCTATTTTTTACAAATGGCAGACTATTAATTTTACCAGGTGGATTGAAAAGTGAAAGTGGCTTAAAGTTAATGATACAAATGGTTTGTGCAGTGTTTTCTATAGAAAATTGTATTTTATAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGTTTCCAATGGCTATATGCTATTATTAATTTTAAGGAATGCTGATTTTACAGTG # Right flank : TGAAATAGACAACTAACGGCAAAAATAGGAAAAGTAGATTAAATAATATGAAGTTTTTTACATTTATTTAATGATTTTTATTGTAGACATGTAAAGATGGCTGCGTATAGTGATAATATTTTTAGAAAGTATTAAATAAAATAGCTAATTCATGTAAATTAGGAAAAGATATATATACTTTAATCTTCATAAACTTTTTTTATAACAATTCCTTTTTTAAATCCACTTCGTTTAAGTTTTTTTCTTCTTTTTAAAAGCTCCTCTTCAGAATATATCAATTCAGAGGAAATTCCAAACATAATTTTAATTAAATATGTAAAATCTCTTTTTTTAGCATAATGTATATTAATTTTTAAGTTCCCAATAATATGTATTTAGCTGAAATAAAAAATACATATAGAGATAATGAATTAACGACAAAGATATAGGACATTACTTAAAATATCAATAGCTATTCTCTTATATAGATATATACTTTAAAGTATGGTAATATATATTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 5 296961-297119 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAWI01000009.1 Clostridium tetanomorphum strain NCTC500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 296961 30 100.0 34 .............................. TGCAAATTGGTAGCGGATTACAAATCTTAAATTT 297025 30 100.0 35 .............................. ATATATAACTTCCTTATCCTGGGAAGGTCATGCAT 297090 30 96.7 0 .........................C.... | ========== ====== ====== ====== ============================== =================================== ================== 3 30 98.9 35 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : CTAGATTGAAAAGAAAAGTTAGTTATAGAACTGCAATTAAGTTAGATTGTTATAAGCTAATTAAATTTATGATGGAAGATAAGGAATTTATTCCGTTTAACCTTCAGGAGAAAATGTAAATGGGTAAAAATCTGAATTATAATTATGCTTTTCTTTTCTATGATGTTAATGAAAAAAGGGTTCAAAGAGTTTTTAAAGTTTGTAAAAAATATTTATCTCATTTTCAAAAGTCTGTTTTTAGAGGGGAAATAACTCCATCCAAGCTAATTTCTTTGAGAAAGGATCTGAATAAGGTTATTGATAAAAGTGAAGACTTTGTGTGTATTGTAAAATTATTAAATGATAATGTATTTGGTGAGGAGATTTTGGGAGTACAGAGCAACAATACTGGAGAGGATTTAATAATTTGATTTTACCAGGTGAAATATATTTTAAACAAACCTTGAGTTTCCAATGGTTTTGTGCTATTGTTAATTTTAAGGAATGCTGATTTTACAGTG # Right flank : TACTGTTCTGTTGCAGCTAAAACATGGTATCAATGACGCCGGGGTCATTACAGAAACTGGAAAGTTTTTGTATGTTTGAAATTTTTGGTGTTTTAACAGAAGAAGAAAAACAATATGTTGTAAATAATATTGTAAAACAATTTTCATCACAAGAAAAATATAAAGAGTAAGCTTCAACTGATTTTAATACAGATTCTGATAAGATTAGTGCACCAATTAGATTGGAGAATAGTTCAGATGTAATAAAGGATAAAGTAGATAAAGGACAAGCAACTATTGACCATAAGATAAAAGTGTGAAAGAAACTAAAAAAAAGCAGAAGCATTTTGAGAATTGTCTAAAAAATATAAAAATAAAGCTAAGGAAATCGAAGCAGAATTGGCAATGTGCTATTTAGGAGGCATAGAGACAAAAAAGATATTTAAAAAGCATTTTCTTTGCTTGTTAAGGAGTATATGCAAAATCAAATAAAGCATTACAATTATTAGGTGATGATTATT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //