Array 1 31552-32862 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOCC01000003.1 Ligilactobacillus ruminis strain WC1T17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 31552 29 96.6 32 ............................C AGTCAGCGCTTACGCAAACGAGCAACAACTTA 31613 29 96.6 32 ............................C GGATACGCAAAAACCGTGGATGTCACAAAAAG 31674 29 100.0 32 ............................. AAGTATGTCAAGGAGCGTTTAGAATCCCTAGT 31735 29 96.6 32 ............................C TAGTTAACTCTGGTTGGACAAGCAACACCAAC 31796 29 100.0 32 ............................. TTCGGTATCAGTGAAGAAAAAATAATCAATCA 31857 29 96.6 32 ............................C ACTGCAGACTGACGTGAGCGGTGTCAAAGCTA 31918 29 96.6 32 ............................C TTGTAACGAGTTGTTCTAACTTAACAACTTCA 31979 29 100.0 32 ............................. TTAGCATGGACTTTGGGAACTAATTACTCTAA 32040 29 100.0 32 ............................. ATGATACTCAAAGCCCAAGCGAGTTGCTTAAT 32101 29 96.6 32 ............................C ATGGTATCAACTTTTTGTGATTGCCATGTTGT 32162 29 100.0 32 ............................. TCATCATCTATCGCATCCAACGTATCTTTGAC 32223 29 96.6 32 ............................C GATTGCGTCTGTTTTAATATTTAACTTAGAAA 32284 29 100.0 33 ............................. GCGGCTAAGGTCAACCTTATCAACGTCAACGCA 32346 29 100.0 32 ............................. CACGCGCTTAGCTTCACTATCAGGAAGCTCGT 32407 29 100.0 32 ............................. TATTTCGTCAGTAATTAATTGCAACTCACGTG 32468 29 100.0 32 ............................. TAACGTGTGTTTGTCGTCATATACGCTAGAAG 32529 29 100.0 32 ............................. CAGAAAATGAATTTAAATGACAATTTAATAGA 32590 29 96.6 32 ............................C CATCATTCGCCACCGTCGGTGTGGATTTTTGA 32651 29 100.0 32 ............................. GAGTTTTGTTTGTCGCCAATAATTAGACATAA 32712 29 96.6 32 ............................C GGTCTGTCGGCAAGCGACTTCCGCTACTTGTC 32773 29 100.0 32 ............................. ACTATCCAAGACTACATAGGATGTGTCAGCAA 32834 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.5 32 GTATTCCCCACAAGTGTGGGGGTGATCCT # Left flank : TTAGACTACAACGATGATAACATTATATCAATAGGTGCAAAAAAACAAAGTGGTCAGGAGTTTAGTAGGTATATAGTCTTGCCAAACAGTAGTATACCAATCAACATTGTTAAAATGACAGGGATTACTGATAATACTTTGCAAGAAAAAGGTGTTGACATCAAGGAAGCACTGGTTAACTTAAAGAAATTTTTAGGTGATTCGACAATAGTTGGCTACAATCTAACGTTTGATATGAATTTTTTGCAGATAGCATGTAAAAAAAGTGGCCAAGATGAGATAACGAATCACACGATTGATTTAGTGCCTTTGGTAAAGAAGGATGACGAATTCTTGGATAATTATCGTTTGGAAACAGTTTTAAGGGAATATGGGATAAAAAACGAAAATCCGCATCATGCTTTGTCCGATGCTAAAGCAACTTTAGAGTTAGCGATTCAACTGGTAAAAAATGGCAGACTCAAGTTTTAGGAAGCGCGTCATTATAGGGATCTTTTAGT # Right flank : CATTCTCTGTCAATACGTCCATCTCGGATTTGGAATGGAAGATAGACGGTTAGCTTTTGTATGCCAGCCCACAGGTCAATTTTAAGGATGTTATTTGTCAGCAAATCTAGTTCTTTATTGAAAGTTTTATCAATGACTTCATGATTATCGTTAATTGTAATTCTTGTGAGTTTGCTGTAGATATCGGACTTGTTATTTTCCTTCACCGTGCGTTTGATGTTGACGTACACATTATTGCGTTAACAAACCAAATAAGAAAAATGGATCAGTGTCAATGTCGCCGATAACGTTTATTTCGTTGATGATAACACCTTGGGTGATGGCTTCTAAATCTAAAGTAGTTTCACGTTTAAATATATTTATGCCCCCCTTTTTTGCCATATGTGGTAAAATCTGGCACAATAAGATAGGGAAGGGGGAAAATATGATTAAGCATGAATTAGTTAAGCCAAATGATGGTCTGCCTTTTATGCTTTTTTGCAATCGTGGGGTAACCCGCT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAAGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //