Array 1 120904-122922 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014657.1 Mycoplasmopsis arginini strain HAZ145_1 isolate Mycoplasma arginini #HAZ145_1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 120904 36 100.0 30 .................................... GATATTTTATTAAAAGTTTGAAACAAAGAT 120970 36 100.0 30 .................................... AATATTGGACGAAAATGAATTGATTCAAAT 121036 36 100.0 30 .................................... CCGCCAAAAATAAGATTGAAAGCGAAGGAG 121102 36 100.0 31 .................................... CACTTGCTGGTTCAACTCCTTTTAGTTTTGC 121169 36 100.0 30 .................................... AATATGCAAAATATAACTGGATCTGCAGAT 121235 36 100.0 30 .................................... TTCAGTTGAAACAGTTTTTAGATTATTATT 121301 36 100.0 30 .................................... TTGAGATAGGAAGATTAGAACTTTCTGGCG 121367 36 100.0 30 .................................... AGATAGAATTGAGAATTTATCATACAGTAA 121433 36 100.0 30 .................................... TAAAATTCTATGAACTTCTCTCACATAAGT 121499 36 100.0 30 .................................... AAAAGTGCTTTCTTATCTAAATACCATAAA 121565 36 100.0 30 .................................... ATTTTTATATTAATTTACTCATTCAATAAA 121631 36 100.0 30 .................................... ATTCATCTTATATCTAGGAACTGCCACAAT 121697 36 100.0 30 .................................... TTGAGATGATACTGATGGAGATAGTCCTTT 121763 36 100.0 30 .................................... CTTAAATTCCATAATCTGTTACTCTCCTTC 121829 36 100.0 30 .................................... AAAATATCGGCAGGAGTTAGATTTTTGTAT 121895 36 100.0 30 .................................... TCAATCTTATTTTTAGCAGTTTTTAAAATA 121961 36 100.0 30 .................................... TTATAGGGTGATAAGTAAAGGTAAAAATAT 122027 36 100.0 30 .................................... AAAAAGTCAAAAATATAGTTATATGTCTAA 122093 36 100.0 30 .................................... TAATATTATTATAAGATAAATTCTCAATCC 122159 36 100.0 30 .................................... TAAGCAAAGCCTCATTCTCTGCGATTAATT 122225 36 100.0 30 .................................... AGAGTATTCGCCTTGATTATAATTTACTAA 122291 36 100.0 30 .................................... TAACTGAACTTATTCTAGCGAATTGGATTA 122357 36 100.0 30 .................................... TATATAATTACATCAGAGTTAGGCGGTAAG 122423 36 100.0 30 .................................... GAGTAACTGAACTTACGCTTATGATATTGA 122489 36 100.0 30 .................................... TAGGCTTTGAAGTGATAAGATATCACAACG 122555 36 100.0 31 .................................... CAACTCTTGTTAGTCCTAACCAAGACGCTTT 122622 36 100.0 30 .................................... TTATAACTTAAATTTTCAATTTTATCACCC 122688 36 100.0 30 .................................... ATAATCGATATAGCCTAAAAAGCCTGCAAT 122754 36 100.0 30 .................................... TAATTTGCCAATCTTTGCTCCACTCGCGAT 122820 36 100.0 30 .................................... AACACTTGTTAGCCCTAACCAAGACGCTTT 122886 36 94.4 0 .............................T.....A | A [122914] ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.8 30 ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Left flank : TTAGATCAAGAAAAAGTAGATACAATTATTGAACAAATTAATTTAAAAATTGGTTTTGAATATTTATTTAAAGATATAGATAACAATAAATTAATAAAATCAATATTTACTATTAACGAAAAACTTTTAATTAGTAAAAATAATTTATTAAATATATTAGATATTTTGAGCTCATCAAATTTTAAACCATTAATTATAGTAAAAAACTTAACATATATTAATATCGAAGAACTTATTAAATATAGTAATTTAAACTTTTTAATTTTAACTTCTGATTTTACAAAATATATTCAAAGTTATAATCAGTTGGAACTAGTAAGCTTTTATAATGGAGAAATTCTTTTTGATATTAAAAGTTGTACTCCAATAATTAATTTTTTTGAAAATATTAAAAATAAAGAAATAAAAGAAAATGAAAATTTTTTCTTAAATAAAGAGGAGGAAAAACAGTTTAAATTTAACTTTTTTGACATAAAAAAGAGTTTTTTTGAATAAATGAC # Right flank : ATTAAAAATATGATACCAGTTTACTTTCGTACGCCGGAACTATAATGAACCCCAAAAGTTTTTCCAAATTACTTGGTCCAACTTTTGGGGTTCATTATATTGTGACTCTTTTTTTATTAACACACTTATTTTTTACACATTCTTTTTATAATTACTTGATATAATAAATCAGCATTTAAATATATTAAAAAAATAAGAAGGAGAATAAATTTTATGTTCTTTAAAATAAATAAAAAACGCGGGGAATCAAGCTTTTTTGCAATAAAAAAATTTGCAAAAGAAAATAATATAAAAAAAATTGGACACAGTGGAACGTTAGATCCATTAGCTGATGGACTTTTAATTGTAGCTACAGATGAAGATACAAAAACTCTTTCTTATTTAGTAAATGATACTAAAGAATATTATGTAAAAGCTACCTTACATTGCACTTCGAGAAGTTATGATGAAGGTGAAGAAGTTATTTATTTAGATAATAAAAATAAAGTTAGCAAAGAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //