Array 1 328755-331656 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCM01000001.1 Aggregatibacter kilianii strain PN_537 NODE_1_length_484313_cov_65.1698, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 328755 32 100.0 35 ................................ TTGTATACTCTGCACTGGTCGAACGACGTCCCAGT 328822 32 100.0 34 ................................ AGGCGTTCCAACAACCAACCGGTGGTCACCTTGT 328888 32 100.0 35 ................................ CTTTATCTGTCGTTAGACTATACACTTTGGCGTGG 328955 32 100.0 35 ................................ CACCTTGCGCATCGCTTTAATGGCTTTCCACAAGT 329022 32 100.0 33 ................................ ACTATCCCCATCTTTTACTATATTAGGATTTTG 329087 32 100.0 33 ................................ TCGATGAAATTTAAAGACTTGAGCGAAGCTGAA 329152 32 100.0 36 ................................ TACGGTGATTTTGGCATCTGTCACGTTATCCCAATC 329220 32 100.0 35 ................................ CACACAATTTTGCGTTTTTCCACTTCCGTTGCTGT 329287 32 100.0 35 ................................ TTTTGCTGCGGGTTATGCAGACGTTGCCGGAAGCA 329354 32 100.0 36 ................................ ATTAAAGACCGCATAGAAACAACTTTTTTGATGTCC 329422 32 100.0 35 ................................ ACAATAAGAGAGACCCTAGGCAATGCCTAGGGTTT 329489 32 100.0 36 ................................ AAAGGGCATCGGTTTAATGAATCAACGTGGCGACTT 329557 32 100.0 34 ................................ GCGCGGATAAACAAGCACCATTACAGACTTACCT 329623 32 100.0 35 ................................ CAACCATGCCAAAGTCAAAAATAGAACGAATCACG 329690 32 100.0 35 ................................ TAAGCCACGCAAGCGCACCATCATTTCCTGACGGC 329757 32 100.0 34 ................................ TCCCTATATTAGCCCGCTTTAGCGGGCTTTTTTT 329823 32 100.0 35 ................................ AGAATCGGCGAATTGTGCGGCAGAATATTTATGCT 329890 32 100.0 35 ................................ CCCAAGTACGTGATCGGGAAATAATCGTTGTTTAT 329957 32 100.0 35 ................................ ACGGCTGATCGGGATTGTGCGGTTGCGGTTGCTTT 330024 32 100.0 36 ................................ ATTGCTCGCTTAAAATTATCAACGCGCAAAAAATAA 330092 32 100.0 35 ................................ TTGGAACCAGGGTTCGATTAAGTCATTTACGGCGG 330159 32 100.0 36 ................................ TAGTATTGGAAATGGTAAAGGTGAAGGTGAAGGTGA 330227 32 100.0 35 ................................ ACAATCTCCGGCGGACGCAATTCAATGTGAAATTT 330294 32 100.0 33 ................................ TCGGAGTTTATAGCCCCGTGAATATGGGTCTAA 330359 32 100.0 36 ................................ TTTGTATAGCCCGATCCCTTCTAACGGGTTCCCGCT 330427 32 100.0 35 ................................ AGAATCGGCGAATTGTGCGGCAGAATATTTGTGCT 330494 32 100.0 34 ................................ TGCAATTAAGCTGTCTGATAATGATAGTTTTGAT 330560 32 100.0 36 ................................ CGCTCGTTGCGCGGATAAAAGTGCGGCCTGTTTTTG 330628 32 100.0 34 ................................ CATTTAGTGCTGAGTGTTCTCAACTTGCCACTCG 330694 32 100.0 35 ................................ CATATAATCCAAGCTAACATACCGCTGAAAATCAG 330761 32 100.0 34 ................................ AATAAGGAGGCTTGACATGAGCAAAATCATCGAA 330827 32 100.0 33 ................................ AGCAGGGAAGAAATCACGCTTAGCCCACGTTCC 330892 32 100.0 35 ................................ GGCGTAAGTGTCAAATTTAGAATCACTTGTCATGA 330959 32 100.0 35 ................................ ATATAAAATAACGGAGGCACAACAATGACATTTAA 331026 32 100.0 37 ................................ TGGCCCCCTTTGATTGAATTGCATTAAGTAGCTCCAA 331095 32 100.0 35 ................................ TAAACAAAAATAGGAGAAACATAATGAATCAAGAA 331162 32 100.0 35 ................................ TCATCAATAAGACGTTGTGCATCTGAGAACAAGGG 331229 32 100.0 32 ................................ GCGCCGTGCTCAATCTTGGCAGTGCAGACAAA 331293 32 100.0 34 ................................ GGGTGTAACAGAACGCCCCGAACTTCTTCGAGCG 331359 32 90.6 35 ..........T..G.T................ GCCAAAGGTGACCGTGGCAAGGCACATGAAATCGC 331426 32 90.6 34 ..........T..G.T................ CAGTATTTAAGTTAAGGTGTTTAAATTTTATAAA 331492 32 93.8 35 C......T........................ AGGGTACCACACCACCCCGCCGTGCCAGCCTTTAT 331559 32 93.8 34 ..........T..A.................. TCAAAGTAGATCACAAAGGTGGTGAGCATACCGC 331625 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 99.2 35 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCATATCGCAAAACATTGCTTAGATTACGGCGTACGCGCGCAATATTCGGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCATGTTGAAAAACAAACTGTTGGAGACCTACGACCCTACATGTGACAGCCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAAGGGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGCTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATAAGTTAATTTATTTGTATAACGGCGGTATGGCCGTTATGCTTACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTAGCTAGGGA # Right flank : CTAACGCTTATATATCAATAAGATCAAGTAAGATCGCAGCCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCTTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTATTTATCTACGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACTAATTCAGGATTATGCACAGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTTCGTCCGCCAAGAAGATTGATGATTTGTACCACTTGCGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //