Array 1 28815-26803 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034663.1 Moraxella catarrhalis strain 74P58B1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 28814 28 100.0 33 ............................ CACCAACGCTGTCTACTTGCTCAATTTTATTTG 28753 28 100.0 32 ............................ TGATACTGCCCCGTCTACTTCACGACCGCACA 28693 28 100.0 32 ............................ TGTTTAACACACCAGTGATACTGCCCCGTCTA 28633 28 100.0 32 ............................ TCTGGAGCTGCTGTCCAATCTGTTGCGATGTT 28573 28 100.0 32 ............................ AAAAAACCAGCAGTGATAGCAAAGCCAAAACA 28513 28 100.0 32 ............................ TGACCGTGTCAAGGTTTTAGTATCGGGCGATG 28453 28 100.0 32 ............................ GTCGGCTGATGATATTGGGGTGTATTTTTAGT 28393 28 100.0 32 ............................ AAAAACCCTGTGATGATTGGCGTTGAACAAAT 28333 28 100.0 32 ............................ GCTCCAGCTTTGGCGGCGGCGTTAATCAAATC 28273 28 100.0 33 ............................ CTGTGATTTTATCAGCTAAAACTTGCCCACGGA 28212 28 100.0 32 ............................ AACTTTCAATAAACTGCTGCCAGCTTTGATGC 28152 28 100.0 32 ............................ ACATCAGGTGATCAGGCAGTTTTGGCAAGACT 28092 28 100.0 32 ............................ TTGGTCAAACAAGGAGAAAAAAGATGAGTAAC 28032 28 100.0 32 ............................ AGCAAATACAGCCAAAAACCAAAGCCAAGATA 27972 28 100.0 32 ............................ GTCTTAAGCCGGCCACAACACCTAAAGCACCT 27912 28 100.0 32 ............................ ACCTTAATCAAACCAAAACTGATGACTATAGA 27852 28 100.0 31 ............................ GCGATGGGCGGTATTTGATGATGTATTTGAT 27793 28 100.0 32 ............................ ACCATCTACAAGACCATATATTTCACCCTCTG 27733 28 100.0 33 ............................ CGCTAAGAAATCATGGAACAATATTAAACGCAG 27672 28 100.0 32 ............................ TTGAACGCACGCTAACAACAAACAATCAAAGC 27612 28 100.0 32 ............................ AAAGTTACTTGTGTTTTAGTTTGGGCAAGATA 27552 28 100.0 32 ............................ AGACCAAATCCGCCATGCTTGTTTACTACCAC 27492 28 100.0 32 ............................ TTATCGTTTTTATGATGCAGTGACACGCTTTT 27432 28 100.0 32 ............................ TAAATGTTGCATTAATCAGACCAACAATAATA 27372 28 100.0 32 ............................ AAGCTAAAGAATTTAAAATCAAATGGCAACCC 27312 28 100.0 32 ............................ GATAAGCTGTACGGGCTAAGCGATACCACTGT 27252 28 100.0 32 ............................ GTTGTTAAGCTTTGATTAAGTGTGTTAATACT 27192 28 100.0 32 ............................ AAGCGTTAATAGCTTAAGCGAAAGCTTAGCAA 27132 28 100.0 34 ............................ AAAAAAGAAAAACCGCCAGCACATGCCAGCGGTT 27070 28 100.0 32 ............................ TCATTATTATCGCCAAAACTCACCCAGTCAAA 27010 28 100.0 31 ............................ AAAAGTTCGGTAAAACTTTTAAGTTATCTGT 26951 28 100.0 33 ............................ AACCGCTTTAAATGCAACAGATAAGGCATCTGT 26890 28 100.0 32 ............................ TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 26830 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 34 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGACGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //