Array 1 141445-143267 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCET01000008.1 Streptococcus ruminantium strain MO430, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 141445 36 100.0 30 .................................... CTATATTTTGATGACGACAATGTCAAACTT 141511 36 100.0 30 .................................... GAAAATCCCTCTTTCAAGTCCGCTTGAATA 141577 36 100.0 28 .................................... CTCTGTGATAACCTTGAAAACCATCTCT 141641 36 100.0 29 .................................... ACTGAATTAAAGAAAGAACTCAATGCTTG 141706 36 100.0 29 .................................... CAGCAACAAGCCTTTCACTAATAGTTCCC 141771 36 100.0 30 .................................... TTTTGCCCTTTTACCGAGATGATTGCAGGG 141837 36 100.0 30 .................................... ATAAACTGAAAACCATAGCTGATGAGGCTA 141903 36 100.0 30 .................................... AACATAAAAAGCCAGCACTATTCGTACTGG 141969 36 100.0 30 .................................... CTGAAGCTTGGCTGGAGGTTAATTCTGAAG 142035 36 100.0 30 .................................... CAGCTGCATTAGCAAAAGTTACTGATAAGG 142101 36 100.0 30 .................................... AAGGTCAAACTTTATCTAAAGAAAATCAGT 142167 36 100.0 30 .................................... TGGATTAGTTCCATTTAGTTCTCCTTTTTT 142233 36 100.0 30 .................................... CTGGTGTTTTGAACGGTAAAATGAAGGCTA 142299 36 100.0 30 .................................... CCGTTCTAAATCGTCCAATTTGTACCGATG 142365 36 100.0 30 .................................... AACTAGGCTTGATATTGGATGGTACACTAG 142431 36 100.0 30 .................................... TCTAAGGATCTCTTGTGTCCACGATAAGCT 142497 36 100.0 30 .................................... ACCACAACTTTACGTTCGTTGGACTACTCC 142563 36 100.0 30 .................................... AAGCATTATTATCATTAGTGCTTTCTGGTT 142629 36 100.0 30 .................................... AGGTTGCATAGCCACCAGTCGTTGACGCGA 142695 36 100.0 30 .................................... CATGAGGGGAGGTGGCAGTGATTGGTGATG 142761 36 100.0 30 .................................... GAAGAGCAATACCACCGAAAACACTTGCCG 142827 36 100.0 30 .................................... TTTAGAGCTTGATCCATTTCAGTCAGCTGT 142893 36 100.0 30 .................................... CTAGGTGCTGTAATTGATAAAAGTGAACTA 142959 36 86.1 37 .................GC....A...T.......T GCTTGACAATATGATTAGATAATGATATTGTTCTTGT 143032 36 72.2 30 ...C...A.T...T.G.....G.....AG..C.G.. AACCAAAGCTAACTACAAACGTGAATTTTA GG [143038] 143100 36 97.2 30 ...................................T CGTTGTCAGCTGTAATCGTGATATTCGATT 143166 36 100.0 30 .................................... CGTATTATTATATTTATCGTTTGAAACACC 143232 36 86.1 0 ...............................CCCCT | ========== ====== ====== ====== ==================================== ===================================== ================== 28 36 97.9 30 GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC # Left flank : AAATATGGATGATTATTTGGGCTATTCTTCTTTTACAAGAATCGCTCAACACTTAGAAGTGCTCTGTCGAAAATATCCATATTTTCATGTTATGATATTTCCTTCTCAAGAGGGATATCTATACTTAAATGAAAGCACGATTGAAACGGTGAATATTTTAGCAGATCAAATTGAGCATTATCCAGCACTTGAATTTCTATATGAGCGCTATAAGGTCTCTTATCCTTCCAATAATCCATTAGACAAACAAGAGTTTTTGACTTCTTTGAGAAAAGTTAGCTCCTATTTGTTTTGCTCTGAGATAAGCGAAGTGGTTAGTCTGTCATATAGAGATCTACTGACGATAAAGATCATAAATACCCTTTATCAGTATGATACAAAGCCAAAATTTGAGAAATATTCCTTGTCTGTTTTGGAAGAAAATTATCTTAATACCTAAAGTTGACAAGTATTTTGATAGGGATTATAATTGGAGTAAGAGAGTATAAAAATCATTTGAG # Right flank : TCTAAGGTCATTGATTTCTTGACCTTGTTTTTGTCTTCTTAAAATGAAGACAAACTTTTTGTTTTGCCCTGAAATGTAATTTTAAAAGGCTTTTGAATGAAAGAAGAAGCGATTTATTTCTCCGTTGAAGATCGCTTTTTTAATGTCGCGATTTCTTTGAAACAACAACTTTAAATTTTTAGTGATCCTGTTTTGCTTTTTCTATGATAAAGTAATGAAACTGTTATGCCGTTGTAGTGAGTGTTTTTCAAAATTCTTAGAAAATGATAGAATGTTACCATGACTATATAGATAATAAAATACTTTTGTCTCATAAGGAAAACTATAACAACTTCTCAATACTTTGCGGTCTTTTCCAGTTGTTCTCAGAAAATGCAATAAGTGCCTATAGGATGATCGCTTCTATTTGGCTTATCACTATAGAAAGAATATCATGATCTTATTCGTAGTGTAAAAAAAGAAGTAAACCTTTCTATCTTGTAATGTAAGATAATTTGTCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //