Array 1 103144-106355 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELJ010000018.1 Acinetobacter baumannii strain MRSN32954 MRSN32954_contig00018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103144 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 103204 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 103264 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 103324 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 103384 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 103444 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 103504 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 103564 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 103624 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 103684 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 103744 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 103804 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 103864 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 103924 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 103984 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 104044 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 104104 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 104164 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 104224 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 104284 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 104344 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 104404 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 104464 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 104524 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 104584 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 104644 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 104704 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 104764 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 104824 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 104884 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 104944 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 105004 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 105064 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 105124 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 105184 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 105244 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 105304 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 105365 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 105425 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 105485 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 105545 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 105605 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 105665 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 105725 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 105785 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 105846 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 105906 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 105966 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 106026 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 106086 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 106146 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 106206 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 106266 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 106326 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //