Array 1 41772-37574 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFHM01000015.1 Legionella pneumophila strain POC1 NODE_15_length_49147_cov_45.9984_ID_1420, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 41771 37 100.0 35 ..................................... GAGACAATAGCGCAATATATAGAAGAAGAATAATT 41699 37 100.0 36 ..................................... TTCAGCAAAATCAGGTAATACACGCTTTGACATAAC 41626 37 100.0 35 ..................................... CAAGAAATAAAAAATATTTTCTTTTAAGTGAACGG 41554 37 100.0 34 ..................................... AGAAGTCTAACACTGTATCATTTTCATTACTATG 41483 37 100.0 36 ..................................... CAACAGCAACAACTGGGTAAGGTTGACCACAGATAA 41410 37 100.0 36 ..................................... TGGAATTATAAAGGCGATATGTGCTATAGAACAATT 41337 37 100.0 36 ..................................... GGAGCTGGTTAGAATGATTACACACACTATACAACC 41264 37 100.0 33 ..................................... TTCTCTTAATGTTTCTTACGTCTTTCTTAAATT 41194 37 100.0 35 ..................................... TACAGTGTTAGCTAGCACTAATCCTTTTGTTCCCA 41122 37 100.0 36 ..................................... TCATATAAAGGCTGCCAATCAACAACCCAATCATTA 41049 37 100.0 35 ..................................... GCATTTGGCGTTTATGTAATGCAAGCTTACTCTCC 40977 37 100.0 34 ..................................... AATGCAGGAAATGGAATTTAACCTAACCTTTTTA 40906 37 100.0 34 ..................................... CTTTTTGAAGTTCCTGAGATGTGGTGACTTCGGC 40835 37 100.0 33 ..................................... TCAAATGCTGCTGGTACTGCTGGTATATGTGGA 40765 37 100.0 35 ..................................... CAGTTGGTTACTCGAAAATGCGAGACGCTTTGAAT 40693 37 100.0 35 ..................................... AGCTAGTGGCGGAGACAAATATGAAAATTGATTCA 40621 37 100.0 34 ..................................... TCAGCTAACGGCTGCGCATATTTTAAATTATTAG 40550 37 100.0 32 ..................................... CTTGTGCCGGCTTGAACACATCTATATCTATA 40481 37 100.0 35 ..................................... ATAAACAGCCATCCCGATGTTATAAAGGGGATGGC 40409 37 100.0 36 ..................................... AAAATGATAAGGCGAGCGTTTCAGTTCGCATAATGC 40336 37 100.0 35 ..................................... AGCTTTGCTTAGTGTTTTAGGTGCGGAATATGAGG 40264 37 100.0 35 ..................................... ATAACTACCACGTCAATTGCATTTAATCCTTTCGG 40192 37 100.0 34 ..................................... ATTAAAAGTTATAAATATTATATATTAGTTTAAA 40121 37 100.0 34 ..................................... TCATAGTTATCATCAATGCATGACCAGTCTAGGT 40050 37 100.0 35 ..................................... TATTAAATGAATTTGCGCTCCCTGACTGAAAAACA 39978 37 100.0 33 ..................................... ACCTATAAGAGCTGCAATCCATATTGATTTTAT 39908 37 100.0 34 ..................................... AATACGGGTGCTGCTAAAGCACTGTTTCGCTATT 39837 37 100.0 35 ..................................... TCAATGTTTGCCACCAATAACAATAAAAATAGGTG 39765 37 100.0 33 ..................................... TAAAATCATAGGTTGCAGGGAGCGCATCTTGGT 39695 37 100.0 36 ..................................... TGTTTGGTTGCCATATAATCCAACCCCCGCAATTAA 39622 37 100.0 36 ..................................... GTCGTAGCACGCGATTGTTCCCACGCTTGCGTATCG 39549 37 100.0 36 ..................................... CAAGCTAAAGCGGTTCTAGGATTTCCGCCAGTAAAG 39476 37 100.0 36 ..................................... CGCGTTGTAGTTCATGATTCAAATTCAGTATATACT 39403 37 100.0 34 ..................................... CTTTACCTATAGCAGCAGCAACCACCCCAACAAA 39332 37 100.0 35 ..................................... TCGGTAATAATTTCATTTCCTCGTTTGATTATCTT 39260 37 100.0 36 ..................................... GCTATTCAAAGAGGACGATATTGTTAAGCTTGGCAA 39187 37 100.0 35 ..................................... TGTAAGATTGTTATGAAATCTGGTTTCCATGCTTT 39115 37 100.0 33 ..................................... AACAATAATTCCTAATTCTAGCTCTAGTTATTT 39045 37 100.0 33 ..................................... GAATTATATCTACTGTAGCGGGATCGGAAACGT 38975 37 100.0 32 ..................................... TAACTGAAACGTCCTTATGCCTCAACATAATG 38906 37 100.0 35 ..................................... CGCAGTGCAGGAGACAAACAAAAAACTTTAGAAAG 38834 37 100.0 34 ..................................... CTTTGTGCAACAAGTTCAAATTCATCATTAGTTG 38763 37 100.0 35 ..................................... CAATAGACCGAGTGTATTTCTTCTCTTAATGAATC 38691 37 100.0 36 ..................................... ACGCAGCAGCATCCCCACTAGCAGCCCAACTATCAG 38618 37 100.0 33 ..................................... TTCTTTACAATTATTATTGGCACAGTGTTTGCA 38548 37 100.0 36 ..................................... TCCTCGTAAATTTCAGGTACATTTACATCATATGGA 38475 37 100.0 37 ..................................... AACGGCATTCGTTACGGTTCACGCCGAGGCCATAACT 38401 37 100.0 33 ..................................... AATATAACACAACAGTATTTAGACGGCATAAGA 38331 37 97.3 34 G.................................... AGGATAAAGCCATCACACTCAAATTGACCATCAA 38260 37 100.0 35 ..................................... TTCCAAAACATTCAAGGTAATGCTCTTAAGTATAA 38188 37 100.0 35 ..................................... GAATGGGCTGCTTATACTTGGAAGTCTATAGAAGT 38116 37 100.0 35 ..................................... TGCCTAAACCTGATTTCTTCCATAGAGTAAACGTC 38044 37 100.0 34 ..................................... TGCAACGGGTCGAAGTAATCCATTAAGTCAAACA 37973 37 100.0 35 ..................................... TAAAGGCGCAGTACCTTTTTTTAAGTCTGTGAATA 37901 37 100.0 35 ..................................... TGTAATCTTCAACGTTAAAGATGAATTGTTGTGCT 37829 37 100.0 34 ..................................... CAAGAACTATTAATGGATTGGTTGGATTGGTGTT 37758 37 100.0 36 ..................................... AAATCATTGTGATTGGTAATAAAGAAAGCGGTTTAC 37685 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 37610 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 59 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCTTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //