Array 1 162585-161115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAAIB010000006.1 Legionella maceachernii strain Gorman PX-1-G2-E2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 162584 28 100.0 32 ............................ GGTAGCATTAGAACGAAAACGACCAGTAATAA 162524 28 100.0 32 ............................ AATAAGCGAGGGGATAGCTGAGCCAAGCGACG 162464 28 100.0 32 ............................ AACTTTCCACTTGATGTAATGGGGCGGACTGA 162404 28 100.0 32 ............................ GGTTAGTCTGCCAGGAGACATCATTAACAGGA 162344 28 100.0 32 ............................ GACTGGGTTAGTCTGCCAGGAAACATCATTAA 162284 28 100.0 32 ............................ TGTATCGCTCGGATATTCTTGAGCAGTTATGG 162224 28 100.0 32 ............................ GAAAGAATATCAAAAGATTCTAAAAAAACAAC 162164 28 100.0 33 ............................ CCTGGCCTCAGAAGGGTCCTGCTGTAGAGTTAC 162103 28 100.0 32 ............................ TATGGAGCGTGTTAAAGCTGTTGTTGATGAGC 162043 28 100.0 32 ............................ TTGACGAGAAAATTACAACAAAGCTCCTCGAA 161983 28 100.0 32 ............................ AATGCGGATTTTCCGCGCATAAATCCCCTAAT 161923 28 100.0 32 ............................ TAAAAAATACGGTGATATTAAAGTTGATGATG 161863 28 100.0 32 ............................ TTGACGAGAAAATTACAACAAAGCTCCTCGAA 161803 28 100.0 32 ............................ CAACAAAATCAAGAGCTAAACCTAAGCTTTTA 161743 28 100.0 32 ............................ TGATGATTCGACTGATTATATTGTTCCGCAGA 161683 28 100.0 32 ............................ TTTACATCTCCTCTTGGTTTTAAGTGCGTATC 161623 28 100.0 32 ............................ AAATACATTTTTAATTTCAAATGCTATGATTA 161563 28 100.0 32 ............................ ATCAGACAAAGAATATGAGCATATATTTTCGG 161503 28 100.0 32 ............................ GGCATGATTCGTGCACATGATTTTTCTCGTTC 161443 28 100.0 32 ............................ AGGATCATTATCAAACTTTGCGCGAACCTTAG 161383 28 100.0 32 ............................ AAAAAACTAAGGAAGCCTTTATGATTAACGCA 161323 28 100.0 32 ............................ AAGCTTGCAGGGGATAATAACAGGTCATATAA 161263 28 100.0 32 ............................ TGCTAAAGTTAGGGCAAAATTTGATAATGATC 161203 28 100.0 32 ............................ ATGCTTGTCTTTTAGATGTCTTGCTAAAAGCC 161143 28 92.9 0 .................T......A... | C [161118] ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGTGCTAGAAAATTTTAATGCGAAAAAATGGCTAAATTTTTTGTCTGATTACACGCACATCACTAGTATCCGGGAGGTGCCACAAAATATATGCTCCTATGTTCGTTTTAAAAGAAAGCAGTCTAAGTCAAATTTGGAACGATTGGCAAGGAGAAAAGCGAAGTACGAAGCCATTAGTTTTGACCAAGCATTAGAATTACTTAAAAATCGAAAAGAGCAATTAATAAATGCGCCTTATATCAATATATCGAGCAATAGTTCGGGAGAGAGCTTCAAAATTTTCATTATAAAAGAAGTTGCTCATGAGCTGATAAACAATGGTTTTAGTTGTTACGGTTTAAGCGCTACGTCAACATTACCGAATTTTTAGCCTTTATTTTTGCTGCTCTTTAAAAATATAATAAAATCAATAGGTTAGGAAAGGCATGATTTTCATTGGTAATTCTGGGTATTTTTAGCTAAGTATATTAAGAATATCGAATATTTTTAATATAATCTGG # Right flank : CTAATCTTCAAAATTTTCCTTCTTAGCTTCATGGCCGTTAATGGCAATATTAGCGATACAGCCCAATCAATTCAGTATGAGGATTGCTGCTTTTGAGGCAATGGTATTATCTTCACTAATCAATGTGCTTGATGTTGTTCTAGAGATTGTGAAGTAGGGTAAAGACAGGTGGTTCGTAAAGGTTTTTTCGAGCATCTTGTCTAACTCATGATTAATTCCTGATGAGGTCATGATCATAAAGCGTGATTTTTTGAATTTTATATGGGAAGGCATTGTTTTTTTAGTGATTTTCCATGATTAAACGTAAATGATTGCATTTCGCATTTTTGTTTGAAATCTAGTGAATTGCAAATTACTCTCTCTTAAGAAAAATAATTGGTTGACTAGTTGATATGAATAACACTGATCTTAGGCGCGGCAAGTTAATGGCTCGTTAGCTTTTATAAGTTCGTATTTATTTGTAACGAATATTAAGTGAATCAGCAAAAAGAGTTTTGATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //