Array 1 473393-474287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047361.1 Macrococcus canis strain SD607 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 473393 36 100.0 36 .................................... CTGGTTTGATTGCGCATTCTGTAACTGATGAAATTT 473465 36 100.0 34 .................................... GCATAGAAAACAATATTTTCTCTTTGTGAAGCAA 473535 36 100.0 36 .................................... TTAATGCGTATTACATTGATTTCTTGACCGTCTAAA 473607 36 100.0 34 .................................... CATATTCATTGACTAACATATTTTTAACATTAAT 473677 36 100.0 36 .................................... GTAAATCTCTTGTTTAATTGTGTTCATTTTTATCAT 473749 36 100.0 36 .................................... CAGTAATGATTTCAACATCGTCACCACCTAGCATTT 473821 36 100.0 36 .................................... AGTTTCTCTAGGAATTAAAGTTATGAAATATTTCGT 473893 36 100.0 36 .................................... TGTTTGATTATTGTTACATGTTCGCCATTTCTTTTC 473965 36 100.0 35 .................................... GTCTAATGTTTTTGTGTTGTTGAATTGTAATAGCA 474036 36 100.0 36 .................................... TTATATTGTAGTCCTACCAATTTTTTATTGCTTGAT 474108 36 100.0 37 .................................... ATTGCTTCATCTATACTATCTTGCGTTATTCCAATGT 474181 36 100.0 35 .................................... GATAATTTGGGAGGAATAAAAGTTTGGCTTTTTTT 474252 36 88.9 0 ..............................TTAT.. | ========== ====== ====== ====== ==================================== ===================================== ================== 13 36 99.1 36 GCTCGAGACCTACCCCGAGAAATAGGGGACGAGAAC # Left flank : AGATACTTTTTACCATTAAGGATATCAAGGAGAGTGTTCGCTTCATCTATCGAAGCACGATAAAATAAATCTTCTAAAATTGAGATCTCATCTGATTTTGAAACAGTATCATTGCAGTTCTTGATAAGCAGCTCATTCATTTGTTCAACAGTAAAGTTGCGAGCTTTAGTGATGTTTTTGTGATAAAAATGTGTGTCTGAAATGAAGTAAATTATATATAACATCTCAAAGCAATTTTAATGATATCAATAATATTACTTTATTGTAGTATCAAAATTATAACGTAAAAGTATTATTATCTCATACGACAAAAAATGACGTAAATATTTTGTATAATATTATTAGAAAAGCTTTTATTATTTTTTATTCTAAAAAATTTATTATACATAACTTGTCCAAAATTCGGACAAATCATATATAATAAAGTGAGTGTGTGGTCGATTTTAGACCTTATAAAACGCTCTGTAAGACTTGATATATCAATGTTTATAGGTTTCACT # Right flank : CTAAAATCTAATTAATGGAGTGATTTGATTGAAAGATATCGTATATATTGAAAATTCGTATAATGTTTCTGTCAGAGAATTCGGATTTAGGTTTTATAATTTTATTGAGAAGAAAGAATTATTTTTTACATTTGATGATGTAGAAACTTTTATTTTTGATAACCAAAAGTGCTACTTATCAACGAGTTTTATCAACGCATGTATTGATAGAAATATTAATATCATTGTTAATGACGTTAAACACAATCCCGTTGTTGAGTTTGTTTCATTGAAATTACACAGAAATCGTTTATCACGTTTACAATCGCAGATAATGTTATCCCAAAAATCTAAAAATAGAATTTGGAAGAAGATTATTGTTGCTAAAATTAGAAATCAAGCCAGATGTTTGGAATATTGTACTCAGAATAAAGATGATGGTGAGTTTCTTATGGATCTTGCTAGAAATGTTAATGATGCTGATAAGGAGAATCGAGAGGCTGTGGCAGCTAGATTTTATT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCGAGACCTACCCCGAGAAATAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 482915-483446 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047361.1 Macrococcus canis strain SD607 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 482915 36 100.0 33 .................................... ATATTTCTTTCTTTGTAATGCGCAGCAATTTTA 482984 36 100.0 35 .................................... TGTTTTGCTGTCGTGACAGCCTTCAGTGCGTCTGC 483055 36 100.0 34 .................................... TAATATGTAGATGTATTGGTTTCCGACTTTCTTC 483125 36 100.0 37 .................................... CTTTAGCAGTCCAAGTCACAATCTCTTTTTCTGCATC 483198 36 97.2 33 .....................A.............. ATAGTTCTAGAATTTTTTACTTCTGAATATTTA 483267 36 100.0 36 .................................... TCTGCTACTGTGTTGAATATCTTCTTTGCCATAATT 483339 36 94.4 36 ...........C.........A.............. ACTTTCTCAACGCTTACAAGTTCAATCATTATTTTT 483411 36 91.7 0 ...........C....................A..T | ========== ====== ====== ====== ==================================== ===================================== ================== 8 36 97.9 35 ACTCGAGACCTACCCCGAGAATTAGGGGACGAGAAC # Left flank : ACACCATCGAAGTATATTAAATTACATGTCAGGACACCGATGGCATTTAAATCCAATGGGCGATATGAAATATTTCCAAACACTAAAATGATGTATAGAAGTACAATGTTGTTATTTGACGCTTTCTTTGATGAATATCAAATGCATGATCACGAGACGCTGAATTATATTCAGGAAAACGTAACGATTGTAGACTATAATATGAAAAGTACAAGATTTCATCTAGAAAGTGTGAAGATACCTTCATTCATTGGACAGATGACATTAAAGGTTGATGGTGCAAAAACATTTGTGCAGCTCATAAATTTCTTAACTGAATTTGGATCACTAACCGGTATAGGAATAAAGACGAGTATAGGAATGGGAAAGTATGAAATTATTAATAAATAATTTGTCCGCAAATCGGACAAAGAAGATGTGGTAAATTTGATTATTGTCCGTTTTGCGGACAGGAAAATCACTAGAAAACCCTTGATGTAACTGCTTTTACCATGCTATCT # Right flank : TTATTAATAAATAAAAAACGCAATTTACCGTTTCCGGCAAATTGCGTTTTAATTATTGTTAGTTGTTATACAAATTTAGTTTTTCTAGATAATCATTCATATCATCGTATGATTTTTTATTAGATTCAACTAGATTTTCTTTCTTAAGTTGTTCTTCTTTCATTTCGCTAACATATGGAAAATATCTGTCTACAAATTGTTCATATGAATTATTAGACTTAATATCTTTGAATAATTCCATCATTTCATTTTTATGTTTATTTACCTCATTTTCAAATTCTTGCTGGGATTTTAAAGCCATATATGTGCTGAATGCCTCGATACCAACAGTCAATGCTGCGCCACCAAATTTCAAATTTTTTGCTAACTTAACCATCCCCCATGGCCTAAACTTTATAGGAATCCTAGCTGTATCTCTGATAATCTTTATACCTTTTACTAGTTCTTTATTTGGTACAGCGCCAATACCTGAAGCAATATATTTTCCATAGTTAGAACCT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTCGAGACCTACCCCGAGAATTAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 1960072-1956100 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047361.1 Macrococcus canis strain SD607 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1960071 36 100.0 29 .................................... GGAACAGTCAGCACCACATCCAACCGTAC 1960006 36 100.0 30 .................................... GTCAATACTGTTAAATCGATGCTTAAAATC 1959940 36 100.0 30 .................................... AAACAGTCATTGAGTGGGAGAAGCCTAACA 1959874 36 100.0 30 .................................... AAAGCAATTGAGCGCCGAAACTAACTATTC 1959808 36 100.0 30 .................................... GAAATTAACATGCGCGTCTACTTTTACTTT 1959742 36 100.0 29 .................................... TAAAATGAACATACCATGCAATCAACATG 1959677 36 100.0 29 .................................... AAAAGTAATAAATAAAAATTCCGTTGAGG 1959612 36 100.0 30 .................................... TACCTCAAATCGGAGATAACGTTACTGTCC 1959546 36 100.0 29 .................................... AATGTTGCGATTTTGATTGTATCTACTTT 1959481 36 100.0 29 .................................... CTACGAAAAGCTTTCAGAAGAGTCTCAAG 1959416 36 100.0 30 .................................... AGGGGAATCAACTTTAGATGACCGCGTAAC 1959350 36 100.0 30 .................................... TCTTCTTGTCTTGCAATCCTTTTCTTATCC 1959284 36 100.0 30 .................................... CGTATTTTGATGATAATGGAACAGTTAGAC 1959218 36 100.0 30 .................................... ACGGCGTTGAGGCCGGGGAGGGTGTCGTCT 1959152 36 100.0 30 .................................... GAGTATTGGGAGGCCTATCCCCACGTGCGT 1959086 36 100.0 30 .................................... TTCTAAAATTAGAGAGTCGTGGCGTATTTC 1959020 36 100.0 30 .................................... TAAGGCTCCAAAGTATCACGTGGATGATAC 1958954 36 100.0 29 .................................... TTTAAAGATTTAGATGGTGCAGTTTTAGA 1958889 36 100.0 29 .................................... CTTTCTCGGCCAGGTGCTCGGCGATCATT 1958824 36 100.0 30 .................................... AACCCTATCCCCTTTCACTCAAAGGTGTTC 1958758 36 100.0 30 .................................... CTCAAATCGCGCAAGTTAAAAAAGAAATGA 1958692 36 100.0 29 .................................... TATGGTTCGATAATTCCTGCGCTTTCTAG 1958627 36 100.0 29 .................................... AAAGCCTGATATCGATAACTTACTAAAGA 1958562 36 100.0 30 .................................... GACGAATGCTGTATCAAGTGGAATGAATGC 1958496 36 100.0 30 .................................... TATTTGATTGAAAGGAGAGAGTTTGTGGAT 1958430 36 100.0 30 .................................... GCTTCATGAAGTATGGACTGTGAACGGTAA 1958364 36 100.0 29 .................................... AATAAAGTTGATTTAACTGTACTCGAACC 1958299 36 100.0 29 .................................... TAAGAAAAGCACGTCGTCTATTAGCGAGT 1958234 36 100.0 29 .................................... TGATATGATGGCATCAGTCGCAAATGAAA 1958169 36 100.0 30 .................................... ATGTCATATCAATAGAAGGAGATGTATAGA 1958103 36 100.0 30 .................................... CGCTAACTTCTCTTTAATTTCTGTCGGTAC 1958037 36 100.0 30 .................................... ATTTCGGATTGCTTGTTGATGGAGATTCTA 1957971 36 100.0 30 .................................... GTCTGCGAATGTATAGTTATATGATGATAA 1957905 36 100.0 30 .................................... ATTCGATGCAATCTTTTCAACATCTGCAAT 1957839 36 100.0 30 .................................... TGCGAAGTTTGCATGAATCACATTTGAATT 1957773 36 100.0 28 .................................... ATATAAAGATTATGCAGGTGAAAGATAT 1957709 36 100.0 30 .................................... ATTTAATTTTATCAAGTGGAACGAGTGATG 1957643 36 100.0 29 .................................... ATCAATCATTGATTATGCTCAAAATAATA 1957578 36 100.0 30 .................................... AATGACCGCCAGTTCCATCGTTACACCTTC 1957512 36 100.0 30 .................................... TGGTGTCCCTGATTTCTGTCCTGCAGGCAC 1957446 36 100.0 29 .................................... AATATATTACTTTGAAACCCCTCAAACTC 1957381 36 100.0 29 .................................... TGAAATGCTTTCTAAACGTATCGAGTCGA 1957316 36 100.0 30 .................................... TGTTGTGGTCGTGGGAACGTCACCGAACAT 1957250 36 100.0 30 .................................... GCCATAACGAGCAGTTGAGATTAGTTTAGG 1957184 36 100.0 30 .................................... AACAGTTCAAGAAGAGTTAACAACTGTATC 1957118 36 100.0 29 .................................... ATTCACACAATCAACTGCTGCAGTCTGAA 1957053 36 100.0 29 .................................... CTTTAGCCAGATCCCCAACCAAAGTCATG 1956988 36 100.0 30 .................................... TAAGTTCGGACACGTTAATATTATTCATAG 1956922 36 100.0 29 .................................... TAGTTCGTCATCTGAGGTGCTTGAGGCAC 1956857 36 100.0 30 .................................... GAGAAAGTATGATACCGAAGTTTAGAGTGT 1956791 36 100.0 29 .................................... AACGTACCTAATTATCAAAGTATTCCGCG 1956726 36 100.0 30 .................................... AATTACGAATACTGGACGTAAGTCATCAAA 1956660 36 100.0 30 .................................... ATATACAAAATCCACCCAGAATTTACTAGG 1956594 36 100.0 29 .................................... AACGTACCTAATTATCAAAATATTCCGCG 1956529 36 100.0 30 .................................... ATATTTATTAACGATAATATACTTTTCATC 1956463 36 100.0 30 .................................... ACCGTTCGAAGATTATAAACTAACTATCAA 1956397 36 100.0 30 .................................... TATCGTTATTTACGTACAAGAGGTGTTAAA 1956331 36 100.0 29 .................................... ACTAAGATTCCTTTACTTACGTCGGCATT 1956266 36 100.0 29 .................................... GTCGCAATAATAGGTGCTTTCGCCACAAT 1956201 36 94.4 30 ........G....A...................... AACATCAAATTTGTATAACCTACTGAAAGA 1956135 36 94.4 0 ................T.............C..... | ========== ====== ====== ====== ==================================== ============================== ================== 61 36 99.8 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTAAAATTGATGTTCATAATGACTTTAGTCACTTAAGTGCAGTACAAGCGAGGAAAGCATGCATTGATTTGATGAAAGAAGAGAAGAAGGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTGTGGGTGATGTCAAAGTATTTATGGATTTAATTAAGAGTTATGGGATGACAACGATTATGGTTACAAGCCATCCGTATTTTATGGTAGAAGCGGATTGTTTAGCAATGAGCAAACGTAATATGACTTTATTTGATATTAATCAAGTTAGAGAGGAATTCCGGCTAATGTTCCCTGACGAAGATGTGGATGAGAAAATCGTTAGACAGATTGCTATTAATGAATTTTCTCGACAATACTTTATTAAAGATGAACGTTATATCAGATTTATTAATGAGTACTAGTTGTGTATAATATATGATAACTATAAAAAATCGGTTTCATTATCATTATAAAGAGTAGTTTATACCGCATAACTTCGTATTTTGAG # Right flank : TGTTTGAAAAGATGAATGACGAGATGTTAAGTTTTTAGAACTATAACCTTTCAAAATCTGACTCAATCATTTTCAAAACATTATAAAAAAGCAGAAGCACTTTTAAGTGCCTCTGCTCAAATTGTGTGTAGAGTTAATTTTCTGTCTGCGCTACAACGCTGACTCATTGTTACCCTATTATTAATATATTTAGTATAATATTTTCAATTTATAGTTATGAACCAAATATAATCTATACTAGTTTTAACATCTCACCATTTGTATTACATTTTCAACCTTTTCATTTCACTTTTCCTCAATTTCTTGTTAACATAGTCATGCGACATTAGCCACCGAGCGTTCGAGGGGGCAACAGAAATAAAATGAGAACGATGTTGTGTGCTTACTGAAGGTCGGCACTGTACTACCAGCAAAAAGGCCTGTCTGTGGCTTGGCGACTCGGCGCAAGTCTTACCAAATAAAAAAATGTTCGAAACTTTGCCTTGTAGTAAGGGTGTCGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //